RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 SPESP1Q6UW49 350 aa16.05■□□□□ 0.16
PDLIM2-217ENST00000491330 TEX19Q8NA77 164 aa16.05■□□□□ 0.16
PDLIM2-217ENST00000491330 OR13J1Q8NGT2 312 aa16.05■□□□□ 0.16
PDLIM2-217ENST00000491330 GABPB2Q8TAK5 448 aaPredicted RBP16.05■□□□□ 0.16
PDLIM2-217ENST00000491330 RAB11FIP5Q9BXF6 653 aa16.05■□□□□ 0.16
PDLIM2-217ENST00000491330 PITPNM3Q9BZ71 974 aa16.05■□□□□ 0.16
PDLIM2-217ENST00000491330 XKR8Q9H6D3 395 aa16.05■□□□□ 0.16
PDLIM2-217ENST00000491330 ACSS2Q9NR19 701 aa16.05■□□□□ 0.16
PDLIM2-217ENST00000491330 CHRAC1Q9NRG0 131 aa16.05■□□□□ 0.16
PDLIM2-217ENST00000491330 TXLNGQ9NUQ3 528 aa16.05■□□□□ 0.16
PDLIM2-217ENST00000491330 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.05■□□□□ 0.16
PDLIM2-217ENST00000491330 GPN3Q9UHW5 284 aaPredicted RBP16.05■□□□□ 0.16
PDLIM2-217ENST00000491330 PIKFYVEQ9Y2I7 2098 aa16.05■□□□□ 0.16
PDLIM2-217ENST00000491330 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.04■□□□□ 0.16
PDLIM2-217ENST00000491330 GOLGA6L10A0A0M3HER8 536 aa16.04■□□□□ 0.16
PDLIM2-217ENST00000491330 SLC5A10A0PJK1 596 aa16.04■□□□□ 0.16
PDLIM2-217ENST00000491330 MAGEB16A2A368 324 aa16.04■□□□□ 0.16
PDLIM2-217ENST00000491330 KLHL41O60662 606 aa16.04■□□□□ 0.16
PDLIM2-217ENST00000491330 RAB40ALP0C0E4 278 aa16.04■□□□□ 0.16
PDLIM2-217ENST00000491330 PRSS56P0CW18 603 aa16.04■□□□□ 0.16
PDLIM2-217ENST00000491330 ETS1P14921 441 aa16.04■□□□□ 0.16
PDLIM2-217ENST00000491330 IZUMO3Q5VZ72 239 aa16.04■□□□□ 0.16
PDLIM2-217ENST00000491330 CASC4Q6P4E1 433 aa16.04■□□□□ 0.16
PDLIM2-217ENST00000491330 UNC5DQ6UXZ4 953 aa16.04■□□□□ 0.16
PDLIM2-217ENST00000491330 UNC5AQ6ZN44 842 aa16.04■□□□□ 0.16
PDLIM2-217ENST00000491330 OTOAQ7RTW8 1153 aa16.04■□□□□ 0.16
PDLIM2-217ENST00000491330 REXO1L1PQ8IX06 675 aa16.04■□□□□ 0.16
PDLIM2-217ENST00000491330 OR5AR1Q8NGP9 310 aa16.04■□□□□ 0.16
PDLIM2-217ENST00000491330 ACTRT1Q8TDG2 376 aa16.04■□□□□ 0.16
PDLIM2-217ENST00000491330 ABHD17AQ96GS6 310 aa16.04■□□□□ 0.16
PDLIM2-217ENST00000491330 TRAPPC9Q96Q05 1148 aa16.04■□□□□ 0.16
PDLIM2-217ENST00000491330 MRPS18BQ9Y676 258 aaKnown RBP16.04■□□□□ 0.16
PDLIM2-217ENST00000491330 KCNMB2Q9Y691 235 aa16.04■□□□□ 0.16
PDLIM2-217ENST00000491330 SDK2Q58EX2 2172 aa16.04■□□□□ 0.16
PDLIM2-217ENST00000491330 BAHCC1Q9P281 2608 aa16.03■□□□□ 0.16
PDLIM2-217ENST00000491330 A0A0J9YY10 115 aa16.03■□□□□ 0.16
PDLIM2-217ENST00000491330 PGRMC1O00264 195 aaKnown RBP16.03■□□□□ 0.16
PDLIM2-217ENST00000491330 OR2B3O76000 313 aa16.03■□□□□ 0.16
PDLIM2-217ENST00000491330 TIAF1O95411 115 aa16.03■□□□□ 0.16
PDLIM2-217ENST00000491330 IGHEP01854 428 aa16.03■□□□□ 0.16
PDLIM2-217ENST00000491330 CHRM5P08912 532 aaPredicted RBP16.03■□□□□ 0.16
PDLIM2-217ENST00000491330 ST6GAL1P15907 406 aa16.03■□□□□ 0.16
PDLIM2-217ENST00000491330 TCP1P17987 556 aaKnown RBP16.03■□□□□ 0.16
PDLIM2-217ENST00000491330 RAB28P51157 221 aa16.03■□□□□ 0.16
PDLIM2-217ENST00000491330 RRADP55042 308 aa16.03■□□□□ 0.16
PDLIM2-217ENST00000491330 CSE1LP55060 971 aaKnown RBP16.03■□□□□ 0.16
PDLIM2-217ENST00000491330 KLRB1Q12918 225 aa16.03■□□□□ 0.16
PDLIM2-217ENST00000491330 NAA25Q14CX7 972 aa16.03■□□□□ 0.16
PDLIM2-217ENST00000491330 CYP1B1Q16678 543 aa16.03■□□□□ 0.16
PDLIM2-217ENST00000491330 UGT8Q16880 541 aa16.03■□□□□ 0.16
PDLIM2-217ENST00000491330 SLC5A12Q1EHB4 618 aa16.03■□□□□ 0.16
PDLIM2-217ENST00000491330 TCTN3Q6NUS6 607 aa16.03■□□□□ 0.16
PDLIM2-217ENST00000491330 PTRH1Q86Y79 214 aaKnown RBP16.03■□□□□ 0.16
PDLIM2-217ENST00000491330 DCUN1D3Q8IWE4 304 aa16.03■□□□□ 0.16
PDLIM2-217ENST00000491330 SLC22A15Q8IZD6 547 aa16.03■□□□□ 0.16
PDLIM2-217ENST00000491330 ADGRF3Q8IZF5 1079 aa16.03■□□□□ 0.16
PDLIM2-217ENST00000491330 C19orf47Q8N9M1 422 aaKnown RBP16.03■□□□□ 0.16
PDLIM2-217ENST00000491330 CFAP61Q8NHU2 1237 aa16.03■□□□□ 0.16
PDLIM2-217ENST00000491330 GRK7Q8WTQ7 553 aa16.03■□□□□ 0.16
PDLIM2-217ENST00000491330 IP6K3Q96PC2 410 aa16.03■□□□□ 0.16
PDLIM2-217ENST00000491330 TCF12Q99081 682 aa16.03■□□□□ 0.16
PDLIM2-217ENST00000491330 DHRS4Q9BTZ2 278 aa16.03■□□□□ 0.16
PDLIM2-217ENST00000491330 NLNQ9BYT8 704 aa16.03■□□□□ 0.16
PDLIM2-217ENST00000491330 ZNF71Q9NQZ8 489 aaPredicted RBP16.03■□□□□ 0.16
PDLIM2-217ENST00000491330 SLC2A6Q9UGQ3 507 aa16.03■□□□□ 0.16
PDLIM2-217ENST00000491330 SRPK3Q9UPE1 567 aa16.03■□□□□ 0.16
PDLIM2-217ENST00000491330 PRSS21Q9Y6M0 314 aa16.03■□□□□ 0.16
PDLIM2-217ENST00000491330 OR1I1O60431 355 aa16.02■□□□□ 0.16
PDLIM2-217ENST00000491330 FKBP9O95302 570 aa16.02■□□□□ 0.16
PDLIM2-217ENST00000491330 ZSCAN5DPP0CG00 497 aa16.02■□□□□ 0.16
PDLIM2-217ENST00000491330 PIM1P11309 404 aaPredicted RBP16.02■□□□□ 0.16
PDLIM2-217ENST00000491330 UGT2B7P16662 529 aa16.02■□□□□ 0.16
PDLIM2-217ENST00000491330 TPSB2P20231 275 aa16.02■□□□□ 0.16
PDLIM2-217ENST00000491330 F8A1P23610 371 aa16.02■□□□□ 0.16
PDLIM2-217ENST00000491330 ACADLP28330 430 aa16.02■□□□□ 0.16
PDLIM2-217ENST00000491330 CCNFP41002 786 aa16.02■□□□□ 0.16
PDLIM2-217ENST00000491330 GRIA1P42261 906 aa16.02■□□□□ 0.16
PDLIM2-217ENST00000491330 PMS2P54278 862 aa16.02■□□□□ 0.16
PDLIM2-217ENST00000491330 TPSAB1Q15661 275 aa16.02■□□□□ 0.16
PDLIM2-217ENST00000491330 ZC3H12BQ5HYM0 836 aaKnown RBP16.02■□□□□ 0.16
PDLIM2-217ENST00000491330 TLDC1Q6P9B6 456 aa16.02■□□□□ 0.16
PDLIM2-217ENST00000491330 LRRC8BQ6P9F7 803 aa16.02■□□□□ 0.16
PDLIM2-217ENST00000491330 FAM199XQ6PEV8 388 aaPredicted RBP16.02■□□□□ 0.16
PDLIM2-217ENST00000491330 FBXO38Q6PIJ6 1188 aa16.02■□□□□ 0.16
PDLIM2-217ENST00000491330 RAB43Q86YS6 212 aa16.02■□□□□ 0.16
PDLIM2-217ENST00000491330 DSELQ8IZU8 1212 aa16.02■□□□□ 0.16
PDLIM2-217ENST00000491330 DLG3Q92796 817 aa16.02■□□□□ 0.16
PDLIM2-217ENST00000491330 MAGOHBQ96A72 148 aaKnown RBP16.02■□□□□ 0.16
PDLIM2-217ENST00000491330 RAD51AP1Q96B01 352 aa16.02■□□□□ 0.16
PDLIM2-217ENST00000491330 RNF31Q96EP0 1072 aa16.02■□□□□ 0.16
PDLIM2-217ENST00000491330 NDC1Q9BTX1 674 aa16.02■□□□□ 0.16
PDLIM2-217ENST00000491330 AP1M1Q9BXS5 423 aa16.02■□□□□ 0.16
PDLIM2-217ENST00000491330 CHRNA10Q9GZZ6 450 aa16.02■□□□□ 0.16
PDLIM2-217ENST00000491330 CCDC68Q9H2F9 335 aa16.02■□□□□ 0.16
PDLIM2-217ENST00000491330 MRM3Q9HC36 420 aaKnown RBP16.02■□□□□ 0.16
PDLIM2-217ENST00000491330 ICKQ9UPZ9 632 aa16.02■□□□□ 0.16
PDLIM2-217ENST00000491330 E5RI56 91 aa16.01■□□□□ 0.15
PDLIM2-217ENST00000491330 VAPBO95292 243 aa16.01■□□□□ 0.15
PDLIM2-217ENST00000491330 S1PR4O95977 384 aa16.01■□□□□ 0.15
PDLIM2-217ENST00000491330 CCR7P32248 378 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms