RNA–Protein interactions for RNA: ENST00000490723.1

PHC3-212, Transcript of polyhomeotic homolog 3, human

TSL 2

Gene PHC3, Length 264 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHC3-212	ENST00000490723	CHRNA7	P36544	502 aa		3.7	□□□□□ -1.82
PHC3-212	ENST00000490723	MATR3	P43243	847 aa	Known RBP eCLIP	3.7	□□□□□ -1.82
PHC3-212	ENST00000490723	MAGEA11	P43364	429 aa		3.7	□□□□□ -1.82
PHC3-212	ENST00000490723	B3GALT5-AS1	P59052	145 aa		3.7	□□□□□ -1.82
PHC3-212	ENST00000490723	SIM2	Q14190	667 aa	Predicted RBP	3.7	□□□□□ -1.82
PHC3-212	ENST00000490723	NR1D2	Q14995	579 aa		3.7	□□□□□ -1.82
PHC3-212	ENST00000490723	WTAP	Q15007	396 aa		3.7	□□□□□ -1.82
PHC3-212	ENST00000490723	PHLDA2	Q53GA4	152 aa		3.7	□□□□□ -1.82
PHC3-212	ENST00000490723	KRT79	Q5XKE5	535 aa		3.7	□□□□□ -1.82
PHC3-212	ENST00000490723	TMEM139	Q8IV31	216 aa		3.7	□□□□□ -1.82
PHC3-212	ENST00000490723	CEP57L1	Q8IYX8	460 aa		3.7	□□□□□ -1.82
PHC3-212	ENST00000490723	CDK20	Q8IZL9	346 aa		3.7	□□□□□ -1.82
PHC3-212	ENST00000490723	ARHGAP24	Q8N264	748 aa		3.7	□□□□□ -1.82
PHC3-212	ENST00000490723	MAPK1IP1L	Q8NDC0	245 aa		3.7	□□□□□ -1.82
PHC3-212	ENST00000490723	IRGQ	Q8WZA9	623 aa		3.7	□□□□□ -1.82
PHC3-212	ENST00000490723	BTBD10	Q9BSF8	475 aa		3.7	□□□□□ -1.82
PHC3-212	ENST00000490723	NUP85	Q9BW27	656 aa		3.7	□□□□□ -1.82
PHC3-212	ENST00000490723	MMP27	Q9H306	513 aa		3.7	□□□□□ -1.82
PHC3-212	ENST00000490723	SDR39U1	Q9NRG7	319 aa	Predicted RBP	3.7	□□□□□ -1.82
PHC3-212	ENST00000490723	TBC1D22B	Q9NU19	505 aa		3.7	□□□□□ -1.82
PHC3-212	ENST00000490723	GRIP1	Q9Y3R0	1128 aa		3.7	□□□□□ -1.82
PHC3-212	ENST00000490723	PRSS21	Q9Y6M0	314 aa		3.7	□□□□□ -1.82
PHC3-212	ENST00000490723	RNF215	Q9Y6U7	377 aa		3.7	□□□□□ -1.82
PHC3-212	ENST00000490723	CACNA1F	O60840	1977 aa		3.7	□□□□□ -1.82
PHC3-212	ENST00000490723	NISCH	Q9Y2I1	1504 aa		3.7	□□□□□ -1.82
PHC3-212	ENST00000490723		A8MV72	311 aa	Predicted RBP	3.69	□□□□□ -1.82
PHC3-212	ENST00000490723	TSPAN1	O60635	241 aa		3.69	□□□□□ -1.82
PHC3-212	ENST00000490723	KRT5	P13647	590 aa		3.69	□□□□□ -1.82
PHC3-212	ENST00000490723	ALOX12	P18054	663 aa		3.69	□□□□□ -1.82
PHC3-212	ENST00000490723	DNASE1	P24855	282 aa		3.69	□□□□□ -1.82
PHC3-212	ENST00000490723	SLC6A6	P31641	620 aa		3.69	□□□□□ -1.82
PHC3-212	ENST00000490723	CLNS1A	P54105	237 aa	Known RBP	3.69	□□□□□ -1.82
PHC3-212	ENST00000490723	TMEM211	Q6ICI0	200 aa		3.69	□□□□□ -1.82
PHC3-212	ENST00000490723	TMEM173	Q86WV6	379 aa	Predicted RBP	3.69	□□□□□ -1.82
PHC3-212	ENST00000490723	LINC00346	Q8IVM7	164 aa		3.69	□□□□□ -1.82
PHC3-212	ENST00000490723	PTPMT1	Q8WUK0	201 aa	Predicted RBP	3.69	□□□□□ -1.82
PHC3-212	ENST00000490723	ZNF689	Q96CS4	500 aa	Predicted RBP	3.69	□□□□□ -1.82
PHC3-212	ENST00000490723	IWS1	Q96ST2	819 aa		3.69	□□□□□ -1.82
PHC3-212	ENST00000490723	OLFM1	Q99784	485 aa		3.69	□□□□□ -1.82
PHC3-212	ENST00000490723	P2RY12	Q9H244	342 aa		3.69	□□□□□ -1.82
PHC3-212	ENST00000490723	B3GAT1	Q9P2W7	334 aa		3.69	□□□□□ -1.82
PHC3-212	ENST00000490723	CACNG4	Q9UBN1	327 aa		3.69	□□□□□ -1.82
PHC3-212	ENST00000490723	PCDHGB4	Q9UN71	923 aa		3.69	□□□□□ -1.82
PHC3-212	ENST00000490723	LOC102723996	A0A087X1L8	192 aa		3.68	□□□□□ -1.82
PHC3-212	ENST00000490723		A0A0J9YWU9	116 aa		3.68	□□□□□ -1.82
PHC3-212	ENST00000490723	ANKRD18B	A2A2Z9	1011 aa		3.68	□□□□□ -1.82
PHC3-212	ENST00000490723	ANKRD61	A6NGH8	418 aa		3.68	□□□□□ -1.82
PHC3-212	ENST00000490723		H7C423	109 aa		3.68	□□□□□ -1.82
PHC3-212	ENST00000490723	MEIS2	O14770	477 aa		3.68	□□□□□ -1.82
PHC3-212	ENST00000490723	ENTPD3	O75355	529 aa		3.68	□□□□□ -1.82
PHC3-212	ENST00000490723	CRLF1	O75462	422 aa		3.68	□□□□□ -1.82
PHC3-212	ENST00000490723	SORBS2	O94875	1100 aa	Known RBP	3.68	□□□□□ -1.82
PHC3-212	ENST00000490723	WDPCP	O95876	746 aa		3.68	□□□□□ -1.82
PHC3-212	ENST00000490723	TYMP	P19971	482 aa		3.68	□□□□□ -1.82
PHC3-212	ENST00000490723	CA6	P23280	308 aa		3.68	□□□□□ -1.82
PHC3-212	ENST00000490723	STAT2	P52630	851 aa		3.68	□□□□□ -1.82
PHC3-212	ENST00000490723	GRAP	Q13588	217 aa		3.68	□□□□□ -1.82
PHC3-212	ENST00000490723	CUL4A	Q13619	759 aa		3.68	□□□□□ -1.82
PHC3-212	ENST00000490723	PCLAF	Q15004	111 aa		3.68	□□□□□ -1.82
PHC3-212	ENST00000490723	TEAD2	Q15562	447 aa		3.68	□□□□□ -1.82
PHC3-212	ENST00000490723	MEA1	Q16626	185 aa		3.68	□□□□□ -1.82
PHC3-212	ENST00000490723	ADIPOR2	Q86V24	386 aa		3.68	□□□□□ -1.82
PHC3-212	ENST00000490723	RAB42	Q8N4Z0	105 aa		3.68	□□□□□ -1.82
PHC3-212	ENST00000490723	APPL2	Q8NEU8	664 aa		3.68	□□□□□ -1.82
PHC3-212	ENST00000490723	DBF4B	Q8NFT6	615 aa		3.68	□□□□□ -1.82
PHC3-212	ENST00000490723	LPGAT1	Q92604	370 aa		3.68	□□□□□ -1.82
PHC3-212	ENST00000490723	JAKMIP2	Q96AA8	810 aa		3.68	□□□□□ -1.82
PHC3-212	ENST00000490723	ANKRD9	Q96BM1	317 aa	Predicted RBP	3.68	□□□□□ -1.82
PHC3-212	ENST00000490723	NSUN4	Q96CB9	384 aa	Known RBP	3.68	□□□□□ -1.82
PHC3-212	ENST00000490723	FNBP1	Q96RU3	617 aa		3.68	□□□□□ -1.82
PHC3-212	ENST00000490723	ATOH8	Q96SQ7	321 aa		3.68	□□□□□ -1.82
PHC3-212	ENST00000490723	SYT15	Q9BQS2	421 aa		3.68	□□□□□ -1.82
PHC3-212	ENST00000490723	SYT11	Q9BT88	431 aa		3.68	□□□□□ -1.82
PHC3-212	ENST00000490723	URM1	Q9BTM9	101 aa	Known RBP	3.68	□□□□□ -1.82
PHC3-212	ENST00000490723	TEX12	Q9BXU0	123 aa		3.68	□□□□□ -1.82
PHC3-212	ENST00000490723	TRIM15	Q9C019	465 aa		3.68	□□□□□ -1.82
PHC3-212	ENST00000490723	TAB2	Q9NYJ8	693 aa		3.68	□□□□□ -1.82
PHC3-212	ENST00000490723	DAPK2	Q9UIK4	370 aa		3.68	□□□□□ -1.82
PHC3-212	ENST00000490723	ZNF541	Q9H0D2	1346 aa		3.68	□□□□□ -1.82
PHC3-212	ENST00000490723	LOC100509620	A0A075B734	347 aa		3.67	□□□□□ -1.82
PHC3-212	ENST00000490723	GPR75-ASB3	A0A0A6YYF3	556 aa		3.67	□□□□□ -1.82
PHC3-212	ENST00000490723	KRTAP16-1	A8MUX0	517 aa		3.67	□□□□□ -1.82
PHC3-212	ENST00000490723	KLF11	O14901	512 aa		3.67	□□□□□ -1.82
PHC3-212	ENST00000490723	OR10H2	O60403	315 aa		3.67	□□□□□ -1.82
PHC3-212	ENST00000490723	ZFAND5	O76080	213 aa		3.67	□□□□□ -1.82
PHC3-212	ENST00000490723	GPI	P06744	558 aa		3.67	□□□□□ -1.82
PHC3-212	ENST00000490723	OR2T7	P0C7T2	308 aa		3.67	□□□□□ -1.82
PHC3-212	ENST00000490723	POR	P16435	677 aa	Predicted RBP	3.67	□□□□□ -1.82
PHC3-212	ENST00000490723	SLC9A3	P48764	834 aa		3.67	□□□□□ -1.82
PHC3-212	ENST00000490723	CDH13	P55290	713 aa		3.67	□□□□□ -1.82
PHC3-212	ENST00000490723	EPS8	Q12929	822 aa		3.67	□□□□□ -1.82
PHC3-212	ENST00000490723	NTRK2	Q16620	822 aa		3.67	□□□□□ -1.82
PHC3-212	ENST00000490723	C15orf59	Q2T9L4	293 aa	Predicted RBP	3.67	□□□□□ -1.82
PHC3-212	ENST00000490723	ITPRIPL2	Q3MIP1	535 aa		3.67	□□□□□ -1.82
PHC3-212	ENST00000490723	KLHL26	Q53HC5	615 aa		3.67	□□□□□ -1.82
PHC3-212	ENST00000490723	XKR6	Q5GH73	641 aa		3.67	□□□□□ -1.82
PHC3-212	ENST00000490723	RNASEH2B	Q5TBB1	312 aa	Known RBP	3.67	□□□□□ -1.82
PHC3-212	ENST00000490723	PSRC1	Q6PGN9	363 aa	Predicted RBP	3.67	□□□□□ -1.82
PHC3-212	ENST00000490723	RTN4RL2	Q86UN3	420 aa		3.67	□□□□□ -1.82
PHC3-212	ENST00000490723	EID3	Q8N140	333 aa		3.67	□□□□□ -1.82

Retrieved 100 of 20,778 RNA–protein pairs in 182.5 ms