RNA–Protein interactions for RNA: ENST00000490192.1

TM9SF3-206, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 4

Gene TM9SF3, Length 884 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-206ENST00000490192 C1orf52Q8N6N3 182 aaKnown RBP6.22□□□□□ -1.41
TM9SF3-206ENST00000490192 OR52E1Q8NGJ3 308 aa6.22□□□□□ -1.41
TM9SF3-206ENST00000490192 VANGL1Q8TAA9 524 aaPredicted RBP6.22□□□□□ -1.41
TM9SF3-206ENST00000490192 SMPDL3BQ92485 455 aa6.22□□□□□ -1.41
TM9SF3-206ENST00000490192 RBM18Q96H35 190 aaKnown RBP6.22□□□□□ -1.41
TM9SF3-206ENST00000490192 ZNF560Q96MR9 790 aa6.22□□□□□ -1.41
TM9SF3-206ENST00000490192 LRFN5Q96NI6 719 aa6.22□□□□□ -1.41
TM9SF3-206ENST00000490192 PKP2Q99959 881 aa6.22□□□□□ -1.41
TM9SF3-206ENST00000490192 NYXQ9GZU5 481 aa6.22□□□□□ -1.41
TM9SF3-206ENST00000490192 Q9N2K0 584 aa6.22□□□□□ -1.41
TM9SF3-206ENST00000490192 CGNQ9P2M7 1197 aaKnown RBP6.22□□□□□ -1.41
TM9SF3-206ENST00000490192 TRMT6Q9UJA5 497 aaKnown RBP6.22□□□□□ -1.41
TM9SF3-206ENST00000490192 RABL2BQ9UNT1 228 aa6.22□□□□□ -1.41
TM9SF3-206ENST00000490192 GPR132Q9UNW8 380 aa6.22□□□□□ -1.41
TM9SF3-206ENST00000490192 HBS1LQ9Y450 684 aaKnown RBP6.22□□□□□ -1.41
TM9SF3-206ENST00000490192 I6L893 689 aaPredicted RBP6.21□□□□□ -1.42
TM9SF3-206ENST00000490192 FLRT2O43155 660 aa6.21□□□□□ -1.42
TM9SF3-206ENST00000490192 PRAF2O60831 178 aa6.21□□□□□ -1.42
TM9SF3-206ENST00000490192 IGHV2-70P01814 119 aa6.21□□□□□ -1.42
TM9SF3-206ENST00000490192 SCP2P22307 547 aa6.21□□□□□ -1.42
TM9SF3-206ENST00000490192 HSD17B3P37058 310 aa6.21□□□□□ -1.42
TM9SF3-206ENST00000490192 RPL3P39023 403 aaKnown RBP6.21□□□□□ -1.42
TM9SF3-206ENST00000490192 GSDMDP57764 484 aa6.21□□□□□ -1.42
TM9SF3-206ENST00000490192 EGR4Q05215 589 aa6.21□□□□□ -1.42
TM9SF3-206ENST00000490192 CTU2Q2VPK5 515 aaKnown RBP6.21□□□□□ -1.42
TM9SF3-206ENST00000490192 PAPPA-AS1Q5QFB9 102 aa6.21□□□□□ -1.42
TM9SF3-206ENST00000490192 ZNF782Q6ZMW2 699 aaPredicted RBP6.21□□□□□ -1.42
TM9SF3-206ENST00000490192 ZNF517Q6ZMY9 492 aaPredicted RBP6.21□□□□□ -1.42
TM9SF3-206ENST00000490192 Q6ZPA2 131 aa6.21□□□□□ -1.42
TM9SF3-206ENST00000490192 C1orf186Q6ZWK4 172 aa6.21□□□□□ -1.42
TM9SF3-206ENST00000490192 ZNF627Q7L945 461 aa6.21□□□□□ -1.42
TM9SF3-206ENST00000490192 ELMOD2Q8IZ81 293 aa6.21□□□□□ -1.42
TM9SF3-206ENST00000490192 AMER3Q8N944 861 aa6.21□□□□□ -1.42
TM9SF3-206ENST00000490192 CLEC1AQ8NC01 280 aa6.21□□□□□ -1.42
TM9SF3-206ENST00000490192 TRIM44Q96DX7 344 aaPredicted RBP6.21□□□□□ -1.42
TM9SF3-206ENST00000490192 MTERF3Q96E29 417 aa6.21□□□□□ -1.42
TM9SF3-206ENST00000490192 SLX1AQ9BQ83 275 aa6.21□□□□□ -1.42
TM9SF3-206ENST00000490192 S1PR5Q9H228 398 aa6.21□□□□□ -1.42
TM9SF3-206ENST00000490192 SNX25Q9H3E2 840 aa6.21□□□□□ -1.42
TM9SF3-206ENST00000490192 SEMA4GQ9NTN9 838 aa6.21□□□□□ -1.42
TM9SF3-206ENST00000490192 MAD2L2Q9UI95 211 aa6.21□□□□□ -1.42
TM9SF3-206ENST00000490192 PACSIN3Q9UKS6 424 aa6.21□□□□□ -1.42
TM9SF3-206ENST00000490192 HEG1Q9ULI3 1381 aa6.2□□□□□ -1.42
TM9SF3-206ENST00000490192 PRAG1Q86YV5 1406 aa6.2□□□□□ -1.42
TM9SF3-206ENST00000490192 A0A1W2PP11 408 aa6.2□□□□□ -1.42
TM9SF3-206ENST00000490192 LINC01548A6NM66 108 aa6.2□□□□□ -1.42
TM9SF3-206ENST00000490192 SOCS6O14544 535 aa6.2□□□□□ -1.42
TM9SF3-206ENST00000490192 FOXN1O15353 648 aa6.2□□□□□ -1.42
TM9SF3-206ENST00000490192 LCATP04180 440 aa6.2□□□□□ -1.42
TM9SF3-206ENST00000490192 SFNP31947 248 aa6.2□□□□□ -1.42
TM9SF3-206ENST00000490192 MAGEB1P43366 347 aa6.2□□□□□ -1.42
TM9SF3-206ENST00000490192 NPBWR1P48145 328 aa6.2□□□□□ -1.42
TM9SF3-206ENST00000490192 SMSP52788 366 aa6.2□□□□□ -1.42
TM9SF3-206ENST00000490192 NUDT6P53370 316 aa6.2□□□□□ -1.42
TM9SF3-206ENST00000490192 NHLH1Q02575 133 aa6.2□□□□□ -1.42
TM9SF3-206ENST00000490192 PNRC1Q12796 327 aaPredicted RBP6.2□□□□□ -1.42
TM9SF3-206ENST00000490192 GAMTQ14353 236 aa6.2□□□□□ -1.42
TM9SF3-206ENST00000490192 PRSS55Q6UWB4 352 aaPredicted RBP6.2□□□□□ -1.42
TM9SF3-206ENST00000490192 PARM1Q6UWI2 310 aa6.2□□□□□ -1.42
TM9SF3-206ENST00000490192 ZNF66Q6ZN08 573 aa6.2□□□□□ -1.42
TM9SF3-206ENST00000490192 Q6ZSV7 163 aa6.2□□□□□ -1.42
TM9SF3-206ENST00000490192 ZNF367Q7RTV3 350 aa6.2□□□□□ -1.42
TM9SF3-206ENST00000490192 DGLUCYQ7Z3D6 616 aa6.2□□□□□ -1.42
TM9SF3-206ENST00000490192 ARMC9Q7Z3E5 817 aa6.2□□□□□ -1.42
TM9SF3-206ENST00000490192 LDLRAD3Q86YD5 345 aa6.2□□□□□ -1.42
TM9SF3-206ENST00000490192 TBC1D21Q8IYX1 336 aa6.2□□□□□ -1.42
TM9SF3-206ENST00000490192 APCDD1Q8J025 514 aa6.2□□□□□ -1.42
TM9SF3-206ENST00000490192 CCNYQ8ND76 341 aa6.2□□□□□ -1.42
TM9SF3-206ENST00000490192 SEMA6DQ8NFY4 1073 aa6.2□□□□□ -1.42
TM9SF3-206ENST00000490192 OR5R1Q8NH85 324 aa6.2□□□□□ -1.42
TM9SF3-206ENST00000490192 EXOC6Q8TAG9 804 aa6.2□□□□□ -1.42
TM9SF3-206ENST00000490192 CCDC110Q8TBZ0 833 aa6.2□□□□□ -1.42
TM9SF3-206ENST00000490192 PPP4R1Q8TF05 950 aa6.2□□□□□ -1.42
TM9SF3-206ENST00000490192 SSMEM1Q8WWF3 244 aa6.2□□□□□ -1.42
TM9SF3-206ENST00000490192 N4BP2L2Q92802 583 aaPredicted RBP6.2□□□□□ -1.42
TM9SF3-206ENST00000490192 CDKN2AIPNLQ96HQ2 116 aa6.2□□□□□ -1.42
TM9SF3-206ENST00000490192 PCYT2Q99447 389 aa6.2□□□□□ -1.42
TM9SF3-206ENST00000490192 MTERF1Q99551 399 aaKnown RBP6.2□□□□□ -1.42
TM9SF3-206ENST00000490192 RAD9AQ99638 391 aa6.2□□□□□ -1.42
TM9SF3-206ENST00000490192 TEX13BQ9BXU2 312 aa6.2□□□□□ -1.42
TM9SF3-206ENST00000490192 RAB9BQ9NP90 201 aa6.2□□□□□ -1.42
TM9SF3-206ENST00000490192 POLE3Q9NRF9 147 aa6.2□□□□□ -1.42
TM9SF3-206ENST00000490192 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.2□□□□□ -1.42
TM9SF3-206ENST00000490192 KCNK6Q9Y257 313 aa6.2□□□□□ -1.42
TM9SF3-206ENST00000490192 ATXN2Q99700 1313 aaKnown RBP6.2□□□□□ -1.42
TM9SF3-206ENST00000490192 A0A1W2PPK0 400 aa6.19□□□□□ -1.42
TM9SF3-206ENST00000490192 MS4A18H0YCH9 400 aa6.19□□□□□ -1.42
TM9SF3-206ENST00000490192 ATP9AO75110 1047 aa6.19□□□□□ -1.42
TM9SF3-206ENST00000490192 RAD51DO75771 328 aa6.19□□□□□ -1.42
TM9SF3-206ENST00000490192 PTBP3O95758 552 aaKnown RBP6.19□□□□□ -1.42
TM9SF3-206ENST00000490192 GSRP00390 522 aa6.19□□□□□ -1.42
TM9SF3-206ENST00000490192 MT-ATP6P00846 226 aa6.19□□□□□ -1.42
TM9SF3-206ENST00000490192 TGFAP01135 160 aa6.19□□□□□ -1.42
TM9SF3-206ENST00000490192 SMIM18P0DKX4 95 aa6.19□□□□□ -1.42
TM9SF3-206ENST00000490192 MYL6BP14649 208 aa6.19□□□□□ -1.42
TM9SF3-206ENST00000490192 EPCAMP16422 314 aa6.19□□□□□ -1.42
TM9SF3-206ENST00000490192 ARF4P18085 180 aaPredicted RBP6.19□□□□□ -1.42
TM9SF3-206ENST00000490192 HTR6P50406 440 aa6.19□□□□□ -1.42
TM9SF3-206ENST00000490192 RASSF2P50749 326 aa6.19□□□□□ -1.42
TM9SF3-206ENST00000490192 SEC61BP60468 96 aaKnown RBP6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms