RNA–Protein interactions for RNA: ENST00000489772.5

GGA1-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, human

TSL 2

Gene GGA1, Length 1,384 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA1-222	ENST00000489772	POMT2	Q9UKY4	750 aa		10.76	□□□□□ -0.69
GGA1-222	ENST00000489772	ICK	Q9UPZ9	632 aa		10.76	□□□□□ -0.69
GGA1-222	ENST00000489772	CDYL	Q9Y232	598 aa		10.76	□□□□□ -0.69
GGA1-222	ENST00000489772	FAM169A	Q9Y6X4	670 aa		10.76	□□□□□ -0.69
GGA1-222	ENST00000489772	SMG1	Q96Q15	3661 aa	Known RBP	10.75	□□□□□ -0.69
GGA1-222	ENST00000489772	TEX51	A0A1B0GUA7	166 aa		10.75	□□□□□ -0.69
GGA1-222	ENST00000489772	PIPSL	A2A3N6	862 aa		10.75	□□□□□ -0.69
GGA1-222	ENST00000489772		E5RI56	91 aa		10.75	□□□□□ -0.69
GGA1-222	ENST00000489772	BTN3A1	O00481	513 aa		10.75	□□□□□ -0.69
GGA1-222	ENST00000489772	NDC80	O14777	642 aa		10.75	□□□□□ -0.69
GGA1-222	ENST00000489772	RAD1	O60671	282 aa		10.75	□□□□□ -0.69
GGA1-222	ENST00000489772	S1PR4	O95977	384 aa		10.75	□□□□□ -0.69
GGA1-222	ENST00000489772	EBLN1	P0CF75	366 aa		10.75	□□□□□ -0.69
GGA1-222	ENST00000489772	PKM	P14618	531 aa	Known RBP	10.75	□□□□□ -0.69
GGA1-222	ENST00000489772	FOLR1	P15328	257 aa		10.75	□□□□□ -0.69
GGA1-222	ENST00000489772	TUBB4B	P68371	445 aa		10.75	□□□□□ -0.69
GGA1-222	ENST00000489772	CTBP1	Q13363	440 aa		10.75	□□□□□ -0.69
GGA1-222	ENST00000489772	TUBB2A	Q13885	445 aa		10.75	□□□□□ -0.69
GGA1-222	ENST00000489772	KCNAB1	Q14722	419 aa		10.75	□□□□□ -0.69
GGA1-222	ENST00000489772	CRYM	Q14894	314 aa		10.75	□□□□□ -0.69
GGA1-222	ENST00000489772	BBS9	Q3SYG4	887 aa		10.75	□□□□□ -0.69
GGA1-222	ENST00000489772	LARP7	Q4G0J3	582 aa	Known RBP eCLIP	10.75	□□□□□ -0.69
GGA1-222	ENST00000489772	PLEKHS1	Q5SXH7	462 aa		10.75	□□□□□ -0.69
GGA1-222	ENST00000489772	HIBCH	Q6NVY1	386 aa	Predicted RBP	10.75	□□□□□ -0.69
GGA1-222	ENST00000489772	SYT10	Q6XYQ8	523 aa		10.75	□□□□□ -0.69
GGA1-222	ENST00000489772	UNC5A	Q6ZN44	842 aa		10.75	□□□□□ -0.69
GGA1-222	ENST00000489772	CENPU	Q71F23	418 aa		10.75	□□□□□ -0.69
GGA1-222	ENST00000489772	VASH2	Q86V25	355 aa		10.75	□□□□□ -0.69
GGA1-222	ENST00000489772	DCUN1D3	Q8IWE4	304 aa		10.75	□□□□□ -0.69
GGA1-222	ENST00000489772	DENND6A	Q8IWF6	608 aa		10.75	□□□□□ -0.69
GGA1-222	ENST00000489772	ADGRF3	Q8IZF5	1079 aa		10.75	□□□□□ -0.69
GGA1-222	ENST00000489772	CACNA2D3	Q8IZS8	1091 aa		10.75	□□□□□ -0.69
GGA1-222	ENST00000489772	D2HGDH	Q8N465	521 aa		10.75	□□□□□ -0.69
GGA1-222	ENST00000489772	SPATA4	Q8NEY3	305 aa		10.75	□□□□□ -0.69
GGA1-222	ENST00000489772	SNRNP27	Q8WVK2	155 aa	Known RBP	10.75	□□□□□ -0.69
GGA1-222	ENST00000489772	SNF8	Q96H20	258 aa		10.75	□□□□□ -0.69
GGA1-222	ENST00000489772	FOPNL	Q96NB1	174 aa		10.75	□□□□□ -0.69
GGA1-222	ENST00000489772	TRIM51	Q9BSJ1	452 aa		10.75	□□□□□ -0.69
GGA1-222	ENST00000489772	TUBB2B	Q9BVA1	445 aa		10.75	□□□□□ -0.69
GGA1-222	ENST00000489772	SPRY4	Q9C004	299 aa		10.75	□□□□□ -0.69
GGA1-222	ENST00000489772	CCDC68	Q9H2F9	335 aa		10.75	□□□□□ -0.69
GGA1-222	ENST00000489772	FANCE	Q9HB96	536 aa		10.75	□□□□□ -0.69
GGA1-222	ENST00000489772	SOHLH2	Q9NX45	425 aa		10.75	□□□□□ -0.69
GGA1-222	ENST00000489772	ACTR10	Q9NZ32	417 aa		10.75	□□□□□ -0.69
GGA1-222	ENST00000489772	RARRES3	Q9UL19	164 aa		10.75	□□□□□ -0.69
GGA1-222	ENST00000489772	TMEM184B	Q9Y519	407 aa	Predicted RBP	10.75	□□□□□ -0.69
GGA1-222	ENST00000489772	MRFAP1	Q9Y605	127 aa		10.75	□□□□□ -0.69
GGA1-222	ENST00000489772	KIF26B	Q2KJY2	2108 aa		10.74	□□□□□ -0.69
GGA1-222	ENST00000489772	IGSF10	Q6WRI0	2623 aa		10.74	□□□□□ -0.69
GGA1-222	ENST00000489772	AHCTF1	Q8WYP5	2266 aa		10.74	□□□□□ -0.69
GGA1-222	ENST00000489772	SLC9B1P1	A6NJY1	282 aa		10.74	□□□□□ -0.69
GGA1-222	ENST00000489772	EFCAB8	A8MWE9	144 aa		10.74	□□□□□ -0.69
GGA1-222	ENST00000489772	EFS	O43281	561 aa		10.74	□□□□□ -0.69
GGA1-222	ENST00000489772	NIPSNAP2	O75323	286 aa		10.74	□□□□□ -0.69
GGA1-222	ENST00000489772	SPAG6	O75602	509 aa		10.74	□□□□□ -0.69
GGA1-222	ENST00000489772	SEC31A	O94979	1220 aa	Known RBP	10.74	□□□□□ -0.69
GGA1-222	ENST00000489772	CHRM5	P08912	532 aa	Predicted RBP	10.74	□□□□□ -0.69
GGA1-222	ENST00000489772	ATP5D	P30049	168 aa		10.74	□□□□□ -0.69
GGA1-222	ENST00000489772	SLC1A2	P43004	574 aa		10.74	□□□□□ -0.69
GGA1-222	ENST00000489772	RAB28	P51157	221 aa		10.74	□□□□□ -0.69
GGA1-222	ENST00000489772	ITGA8	P53708	1063 aa		10.74	□□□□□ -0.69
GGA1-222	ENST00000489772	ARL4C	P56559	192 aa		10.74	□□□□□ -0.69
GGA1-222	ENST00000489772	MAP7	Q14244	749 aa		10.74	□□□□□ -0.69
GGA1-222	ENST00000489772	HIF1A	Q16665	826 aa		10.74	□□□□□ -0.69
GGA1-222	ENST00000489772	MSS51	Q4VC12	460 aa		10.74	□□□□□ -0.69
GGA1-222	ENST00000489772	HSP90AA5P	Q58FG0	334 aa		10.74	□□□□□ -0.69
GGA1-222	ENST00000489772	SPANXN3	Q5MJ09	141 aa		10.74	□□□□□ -0.69
GGA1-222	ENST00000489772	SPESP1	Q6UW49	350 aa		10.74	□□□□□ -0.69
GGA1-222	ENST00000489772	MAATS1	Q7Z4T9	603 aa		10.74	□□□□□ -0.69
GGA1-222	ENST00000489772	KCNMB4	Q86W47	210 aa		10.74	□□□□□ -0.69
GGA1-222	ENST00000489772	RAB42	Q8N4Z0	105 aa		10.74	□□□□□ -0.69
GGA1-222	ENST00000489772	ESX1	Q8N693	406 aa		10.74	□□□□□ -0.69
GGA1-222	ENST00000489772	BBOF1	Q8ND07	529 aa		10.74	□□□□□ -0.69
GGA1-222	ENST00000489772	OR8K5	Q8NH50	307 aa		10.74	□□□□□ -0.69
GGA1-222	ENST00000489772	KIAA1143	Q96AT1	154 aa	Predicted RBP	10.74	□□□□□ -0.69
GGA1-222	ENST00000489772	FAM136A	Q96C01	138 aa		10.74	□□□□□ -0.69
GGA1-222	ENST00000489772	PPM1M	Q96MI6	270 aa		10.74	□□□□□ -0.69
GGA1-222	ENST00000489772	FCRL4	Q96PJ5	515 aa		10.74	□□□□□ -0.69
GGA1-222	ENST00000489772	UBL7	Q96S82	380 aa	Predicted RBP	10.74	□□□□□ -0.69
GGA1-222	ENST00000489772	NRTN	Q99748	197 aa		10.74	□□□□□ -0.69
GGA1-222	ENST00000489772	PITPNM3	Q9BZ71	974 aa		10.74	□□□□□ -0.69
GGA1-222	ENST00000489772	TRIM31	Q9BZY9	425 aa		10.74	□□□□□ -0.69
GGA1-222	ENST00000489772	FBXO6	Q9NRD1	293 aa	Predicted RBP	10.74	□□□□□ -0.69
GGA1-222	ENST00000489772	FGF21	Q9NSA1	209 aa		10.74	□□□□□ -0.69
GGA1-222	ENST00000489772	IARS2	Q9NSE4	1012 aa	Known RBP	10.74	□□□□□ -0.69
GGA1-222	ENST00000489772	PLAGL1	Q9UM63	463 aa		10.74	□□□□□ -0.69
GGA1-222	ENST00000489772	BTRC	Q9Y297	605 aa		10.74	□□□□□ -0.69
GGA1-222	ENST00000489772	COMMD10	Q9Y6G5	202 aa		10.74	□□□□□ -0.69
GGA1-222	ENST00000489772	FAM187A	A6NFU0	413 aa		10.73	□□□□□ -0.69
GGA1-222	ENST00000489772	KIAA0754	O94854	1291 aa		10.73	□□□□□ -0.69
GGA1-222	ENST00000489772	DLGAP3	O95886	979 aa		10.73	□□□□□ -0.69
GGA1-222	ENST00000489772	MT-ND3	P03897	115 aa		10.73	□□□□□ -0.69
GGA1-222	ENST00000489772	CCNYL3	P0C7X3	344 aa		10.73	□□□□□ -0.69
GGA1-222	ENST00000489772	TPBGL	P0DKB5	382 aa		10.73	□□□□□ -0.69
GGA1-222	ENST00000489772	ERVK-10	P10266	1014 aa		10.73	□□□□□ -0.69
GGA1-222	ENST00000489772	CD9	P21926	228 aa		10.73	□□□□□ -0.69
GGA1-222	ENST00000489772	PKLR	P30613	574 aa		10.73	□□□□□ -0.69
GGA1-222	ENST00000489772	CCNF	P41002	786 aa		10.73	□□□□□ -0.69
GGA1-222	ENST00000489772	ELK3	P41970	407 aa		10.73	□□□□□ -0.69
GGA1-222	ENST00000489772	RHD	Q02161	417 aa		10.73	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms