RNA–Protein interactions for RNA: ENST00000489719.1

ABCF3-217, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-217ENST00000489719 STARD8Q92502 1023 aa17.28■□□□□ 0.36
ABCF3-217ENST00000489719 ZNF501Q96CX3 271 aaPredicted RBP17.28■□□□□ 0.36
ABCF3-217ENST00000489719 TRAPPC9Q96Q05 1148 aa17.28■□□□□ 0.36
ABCF3-217ENST00000489719 SEMA4CQ9C0C4 833 aa17.28■□□□□ 0.36
ABCF3-217ENST00000489719 P2RY12Q9H244 342 aa17.28■□□□□ 0.36
ABCF3-217ENST00000489719 LHX9Q9NQ69 397 aa17.28■□□□□ 0.36
ABCF3-217ENST00000489719 ZNF106Q9H2Y7 1883 aaKnown RBP17.28■□□□□ 0.36
ABCF3-217ENST00000489719 ISM1B1AKI9 464 aa17.27■□□□□ 0.36
ABCF3-217ENST00000489719 GOLGA8KD6RF30 607 aa17.27■□□□□ 0.36
ABCF3-217ENST00000489719 GOLGA8TH3BQL2 631 aa17.27■□□□□ 0.36
ABCF3-217ENST00000489719 ZNF185O15231 689 aa17.27■□□□□ 0.36
ABCF3-217ENST00000489719 SCRG1O75711 98 aa17.27■□□□□ 0.36
ABCF3-217ENST00000489719 SLCO2B1O94956 709 aa17.27■□□□□ 0.36
ABCF3-217ENST00000489719 TIAF1O95411 115 aa17.27■□□□□ 0.36
ABCF3-217ENST00000489719 KLK3P07288 261 aaPredicted RBP17.27■□□□□ 0.36
ABCF3-217ENST00000489719 CHRM5P08912 532 aaPredicted RBP17.27■□□□□ 0.36
ABCF3-217ENST00000489719 ST6GAL1P15907 406 aa17.27■□□□□ 0.36
ABCF3-217ENST00000489719 TCP1P17987 556 aaKnown RBP17.27■□□□□ 0.36
ABCF3-217ENST00000489719 RPS3P23396 243 aaKnown RBP eCLIP17.27■□□□□ 0.36
ABCF3-217ENST00000489719 FMO4P31512 558 aa17.27■□□□□ 0.36
ABCF3-217ENST00000489719 CCR10P46092 362 aa17.27■□□□□ 0.36
ABCF3-217ENST00000489719 EIF3BP55884 814 aaKnown RBP17.27■□□□□ 0.36
ABCF3-217ENST00000489719 KIAA0930Q6ICG6 404 aaPredicted RBP17.27■□□□□ 0.36
ABCF3-217ENST00000489719 NEPROQ6NW34 567 aa17.27■□□□□ 0.36
ABCF3-217ENST00000489719 SPESP1Q6UW49 350 aa17.27■□□□□ 0.36
ABCF3-217ENST00000489719 VRK3Q8IV63 474 aa17.27■□□□□ 0.36
ABCF3-217ENST00000489719 LKAAEAR1Q8TD35 194 aa17.27■□□□□ 0.36
ABCF3-217ENST00000489719 SKA2Q8WVK7 121 aaPredicted RBP17.27■□□□□ 0.36
ABCF3-217ENST00000489719 N4BP2L2Q92802 583 aaPredicted RBP17.27■□□□□ 0.36
ABCF3-217ENST00000489719 PITPNM3Q9BZ71 974 aa17.27■□□□□ 0.36
ABCF3-217ENST00000489719 KLHL25Q9H0H3 589 aa17.27■□□□□ 0.36
ABCF3-217ENST00000489719 NEU2Q9Y3R4 380 aa17.27■□□□□ 0.36
ABCF3-217ENST00000489719 SDK2Q58EX2 2172 aa17.27■□□□□ 0.36
ABCF3-217ENST00000489719 FAM237BA0A1B0GVD1 139 aa17.26■□□□□ 0.35
ABCF3-217ENST00000489719 H3BMM5 538 aa17.26■□□□□ 0.35
ABCF3-217ENST00000489719 CPNE3O75131 537 aaKnown RBP17.26■□□□□ 0.35
ABCF3-217ENST00000489719 FAM87AP0C7U9 286 aa17.26■□□□□ 0.35
ABCF3-217ENST00000489719 CHRM3P20309 590 aa17.26■□□□□ 0.35
ABCF3-217ENST00000489719 F8A1P23610 371 aa17.26■□□□□ 0.35
ABCF3-217ENST00000489719 ARNTP27540 789 aa17.26■□□□□ 0.35
ABCF3-217ENST00000489719 GNG11P61952 73 aa17.26■□□□□ 0.35
ABCF3-217ENST00000489719 THOC5Q13769 683 aaKnown RBP17.26■□□□□ 0.35
ABCF3-217ENST00000489719 DHX34Q14147 1143 aaKnown RBP17.26■□□□□ 0.35
ABCF3-217ENST00000489719 ANKRD20A4Q4UJ75 823 aa17.26■□□□□ 0.35
ABCF3-217ENST00000489719 CRTC2Q53ET0 693 aaPredicted RBP17.26■□□□□ 0.35
ABCF3-217ENST00000489719 UNC5DQ6UXZ4 953 aa17.26■□□□□ 0.35
ABCF3-217ENST00000489719 FOPNLQ96NB1 174 aa17.26■□□□□ 0.35
ABCF3-217ENST00000489719 SERPINB12Q96P63 405 aa17.26■□□□□ 0.35
ABCF3-217ENST00000489719 SLC7A5P2Q9GIP4 190 aa17.26■□□□□ 0.35
ABCF3-217ENST00000489719 LATS2Q9NRM7 1088 aa17.26■□□□□ 0.35
ABCF3-217ENST00000489719 PLAGL1Q9UM63 463 aa17.26■□□□□ 0.35
ABCF3-217ENST00000489719 CDYLQ9Y232 598 aa17.26■□□□□ 0.35
ABCF3-217ENST00000489719 VPS9D1Q9Y2B5 631 aa17.26■□□□□ 0.35
ABCF3-217ENST00000489719 MRFAP1Q9Y605 127 aa17.26■□□□□ 0.35
ABCF3-217ENST00000489719 MRPS18BQ9Y676 258 aaKnown RBP17.26■□□□□ 0.35
ABCF3-217ENST00000489719 C21orf140B9A014 251 aa17.25■□□□□ 0.35
ABCF3-217ENST00000489719 TMEM150CB9EJG8 249 aa17.25■□□□□ 0.35
ABCF3-217ENST00000489719 TMEM63AO94886 807 aa17.25■□□□□ 0.35
ABCF3-217ENST00000489719 ESR1P03372 595 aa17.25■□□□□ 0.35
ABCF3-217ENST00000489719 TPBGLP0DKB5 382 aa17.25■□□□□ 0.35
ABCF3-217ENST00000489719 PVRP15151 417 aa17.25■□□□□ 0.35
ABCF3-217ENST00000489719 UGT2B7P16662 529 aa17.25■□□□□ 0.35
ABCF3-217ENST00000489719 RAB28P51157 221 aa17.25■□□□□ 0.35
ABCF3-217ENST00000489719 RPS15P62841 145 aaKnown RBP17.25■□□□□ 0.35
ABCF3-217ENST00000489719 CDC20Q12834 499 aa17.25■□□□□ 0.35
ABCF3-217ENST00000489719 DNASE1L3Q13609 305 aa17.25■□□□□ 0.35
ABCF3-217ENST00000489719 KIR2DS3Q14952 304 aa17.25■□□□□ 0.35
ABCF3-217ENST00000489719 KYNUQ16719 465 aa17.25■□□□□ 0.35
ABCF3-217ENST00000489719 DEFB109BQ30KR1 87 aa17.25■□□□□ 0.35
ABCF3-217ENST00000489719 PLEKHS1Q5SXH7 462 aa17.25■□□□□ 0.35
ABCF3-217ENST00000489719 PPIL6Q8IXY8 311 aa17.25■□□□□ 0.35
ABCF3-217ENST00000489719 MR1Q95460 341 aa17.25■□□□□ 0.35
ABCF3-217ENST00000489719 ZNF669Q96BR6 464 aaPredicted RBP17.25■□□□□ 0.35
ABCF3-217ENST00000489719 TCTN2Q96GX1 697 aa17.25■□□□□ 0.35
ABCF3-217ENST00000489719 OR2A14Q96R47 310 aa17.25■□□□□ 0.35
ABCF3-217ENST00000489719 GPR87Q9BY21 358 aa17.25■□□□□ 0.35
ABCF3-217ENST00000489719 SPHK1Q9NYA1 384 aa17.25■□□□□ 0.35
ABCF3-217ENST00000489719 SLC39A10Q9ULF5 831 aa17.25■□□□□ 0.35
ABCF3-217ENST00000489719 CRYL1Q9Y2S2 319 aa17.25■□□□□ 0.35
ABCF3-217ENST00000489719 MAD1L1Q9Y6D9 718 aa17.25■□□□□ 0.35
ABCF3-217ENST00000489719 ATRXP46100 2492 aa17.24■□□□□ 0.35
ABCF3-217ENST00000489719 CTAGE9A4FU28 777 aa17.24■□□□□ 0.35
ABCF3-217ENST00000489719 B8ZZF3 427 aa17.24■□□□□ 0.35
ABCF3-217ENST00000489719 MSL3P1P0C860 447 aa17.24■□□□□ 0.35
ABCF3-217ENST00000489719 OGNP20774 298 aaKnown RBP17.24■□□□□ 0.35
ABCF3-217ENST00000489719 CYP2A7P20853 494 aa17.24■□□□□ 0.35
ABCF3-217ENST00000489719 ERV3-1Q14264 604 aa17.24■□□□□ 0.35
ABCF3-217ENST00000489719 TYSND1Q2T9J0 566 aa17.24■□□□□ 0.35
ABCF3-217ENST00000489719 FAM199XQ6PEV8 388 aaPredicted RBP17.24■□□□□ 0.35
ABCF3-217ENST00000489719 PCGF5Q86SE9 256 aa17.24■□□□□ 0.35
ABCF3-217ENST00000489719 DCUN1D3Q8IWE4 304 aa17.24■□□□□ 0.35
ABCF3-217ENST00000489719 GPR135Q8IZ08 494 aa17.24■□□□□ 0.35
ABCF3-217ENST00000489719 RAB42Q8N4Z0 105 aa17.24■□□□□ 0.35
ABCF3-217ENST00000489719 NAT8LQ8N9F0 302 aa17.24■□□□□ 0.35
ABCF3-217ENST00000489719 CT55Q8WUE5 264 aa17.24■□□□□ 0.35
ABCF3-217ENST00000489719 LPGAT1Q92604 370 aa17.24■□□□□ 0.35
ABCF3-217ENST00000489719 SLC22A18Q96BI1 424 aa17.24■□□□□ 0.35
ABCF3-217ENST00000489719 CLIP3Q96DZ5 547 aa17.24■□□□□ 0.35
ABCF3-217ENST00000489719 BIRC8Q96P09 236 aa17.24■□□□□ 0.35
ABCF3-217ENST00000489719 ADNPQ9H2P0 1102 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms