RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 VCANP13611 3396 aa13.8□□□□□ -0.2
VPS26A-205ENST00000489656 SNRNP200O75643 2136 aaKnown RBP13.79□□□□□ -0.2
VPS26A-205ENST00000489656 KNL1Q8NG31 2342 aa13.79□□□□□ -0.2
VPS26A-205ENST00000489656 LRRC14BA6NHZ5 514 aa13.79□□□□□ -0.2
VPS26A-205ENST00000489656 SLCO1B7G3V0H7 640 aa13.79□□□□□ -0.2
VPS26A-205ENST00000489656 K7EPI3 171 aa13.79□□□□□ -0.2
VPS26A-205ENST00000489656 RASGRP1O95267 797 aa13.79□□□□□ -0.2
VPS26A-205ENST00000489656 MLYCDO95822 493 aa13.79□□□□□ -0.2
VPS26A-205ENST00000489656 TNFP01375 233 aa13.79□□□□□ -0.2
VPS26A-205ENST00000489656 FGF4P08620 206 aa13.79□□□□□ -0.2
VPS26A-205ENST00000489656 CCR10P46092 362 aa13.79□□□□□ -0.2
VPS26A-205ENST00000489656 BDKRB1P46663 353 aa13.79□□□□□ -0.2
VPS26A-205ENST00000489656 PIK3CGP48736 1102 aa13.79□□□□□ -0.2
VPS26A-205ENST00000489656 RPL14P50914 215 aaKnown RBP13.79□□□□□ -0.2
VPS26A-205ENST00000489656 BLKP51451 505 aa13.79□□□□□ -0.2
VPS26A-205ENST00000489656 EIF2B5Q13144 721 aaKnown RBP13.79□□□□□ -0.2
VPS26A-205ENST00000489656 UAP1L1Q3KQV9 507 aa13.79□□□□□ -0.2
VPS26A-205ENST00000489656 WDR45BQ5MNZ6 344 aa13.79□□□□□ -0.2
VPS26A-205ENST00000489656 TSSK4Q6SA08 328 aa13.79□□□□□ -0.2
VPS26A-205ENST00000489656 MBOAT1Q6ZNC8 495 aa13.79□□□□□ -0.2
VPS26A-205ENST00000489656 LRRC70Q7Z2Q7 622 aa13.79□□□□□ -0.2
VPS26A-205ENST00000489656 CUZD1Q86UP6 607 aa13.79□□□□□ -0.2
VPS26A-205ENST00000489656 PARGQ86W56 976 aa13.79□□□□□ -0.2
VPS26A-205ENST00000489656 WDR75Q8IWA0 830 aaKnown RBP13.79□□□□□ -0.2
VPS26A-205ENST00000489656 DCUN1D3Q8IWE4 304 aa13.79□□□□□ -0.2
VPS26A-205ENST00000489656 RGL4Q8IZJ4 473 aa13.79□□□□□ -0.2
VPS26A-205ENST00000489656 CACNA2D3Q8IZS8 1091 aa13.79□□□□□ -0.2
VPS26A-205ENST00000489656 ANKS4BQ8N8V4 417 aa13.79□□□□□ -0.2
VPS26A-205ENST00000489656 TMEM105Q8N8V8 129 aa13.79□□□□□ -0.2
VPS26A-205ENST00000489656 DTWD2Q8NBA8 298 aa13.79□□□□□ -0.2
VPS26A-205ENST00000489656 CCDC197Q8NCU1 140 aa13.79□□□□□ -0.2
VPS26A-205ENST00000489656 OR5K2Q8NHB8 316 aa13.79□□□□□ -0.2
VPS26A-205ENST00000489656 CFAP61Q8NHU2 1237 aa13.79□□□□□ -0.2
VPS26A-205ENST00000489656 C10orf82Q8WW14 230 aa13.79□□□□□ -0.2
VPS26A-205ENST00000489656 TFGQ92734 400 aaPredicted RBP13.79□□□□□ -0.2
VPS26A-205ENST00000489656 TSACCQ96A04 125 aaPredicted RBP13.79□□□□□ -0.2
VPS26A-205ENST00000489656 SKA1Q96BD8 255 aa13.79□□□□□ -0.2
VPS26A-205ENST00000489656 PLCD4Q9BRC7 762 aa13.79□□□□□ -0.2
VPS26A-205ENST00000489656 ZBTB26Q9HCK0 441 aa13.79□□□□□ -0.2
VPS26A-205ENST00000489656 TM9SF3Q9HD45 589 aa13.79□□□□□ -0.2
VPS26A-205ENST00000489656 NPHS2Q9NP85 383 aa13.79□□□□□ -0.2
VPS26A-205ENST00000489656 ACSS2Q9NR19 701 aa13.79□□□□□ -0.2
VPS26A-205ENST00000489656 PNPOQ9NVS9 261 aa13.79□□□□□ -0.2
VPS26A-205ENST00000489656 KCNK4Q9NYG8 393 aa13.79□□□□□ -0.2
VPS26A-205ENST00000489656 KCNK6Q9Y257 313 aa13.79□□□□□ -0.2
VPS26A-205ENST00000489656 PLEKHM1Q9Y4G2 1056 aa13.79□□□□□ -0.2
VPS26A-205ENST00000489656 ASB1Q9Y576 335 aa13.79□□□□□ -0.2
VPS26A-205ENST00000489656 ST14Q9Y5Y6 855 aa13.79□□□□□ -0.2
VPS26A-205ENST00000489656 SLCO1B1Q9Y6L6 691 aa13.79□□□□□ -0.2
VPS26A-205ENST00000489656 UBFD1O14562 309 aaKnown RBP13.78□□□□□ -0.2
VPS26A-205ENST00000489656 ZNF195O14628 629 aa13.78□□□□□ -0.2
VPS26A-205ENST00000489656 STK16O75716 305 aa13.78□□□□□ -0.2
VPS26A-205ENST00000489656 WNT1P04628 370 aa13.78□□□□□ -0.2
VPS26A-205ENST00000489656 MPSTP25325 297 aa13.78□□□□□ -0.2
VPS26A-205ENST00000489656 HSPA7P48741 367 aa13.78□□□□□ -0.2
VPS26A-205ENST00000489656 CDH13P55290 713 aa13.78□□□□□ -0.2
VPS26A-205ENST00000489656 PKNOX1P55347 436 aa13.78□□□□□ -0.2
VPS26A-205ENST00000489656 CTBSQ01459 385 aa13.78□□□□□ -0.2
VPS26A-205ENST00000489656 GTF2H2Q13888 395 aa13.78□□□□□ -0.2
VPS26A-205ENST00000489656 ZXDCQ2QGD7 858 aaPredicted RBP13.78□□□□□ -0.2
VPS26A-205ENST00000489656 CCSMST1Q4G0I0 132 aa13.78□□□□□ -0.2
VPS26A-205ENST00000489656 GTF2H2CQ6P1K8 395 aa13.78□□□□□ -0.2
VPS26A-205ENST00000489656 ABRAXAS1Q6UWZ7 409 aa13.78□□□□□ -0.2
VPS26A-205ENST00000489656 LPCAT2Q7L5N7 544 aa13.78□□□□□ -0.2
VPS26A-205ENST00000489656 HID1Q8IV36 788 aa13.78□□□□□ -0.2
VPS26A-205ENST00000489656 TBC1D21Q8IYX1 336 aa13.78□□□□□ -0.2
VPS26A-205ENST00000489656 CHCHD4Q8N4Q1 142 aa13.78□□□□□ -0.2
VPS26A-205ENST00000489656 DEFB119Q8N690 84 aa13.78□□□□□ -0.2
VPS26A-205ENST00000489656 OR9A1PQ8NGU1 263 aa13.78□□□□□ -0.2
VPS26A-205ENST00000489656 GPBAR1Q8TDU6 330 aa13.78□□□□□ -0.2
VPS26A-205ENST00000489656 AGAP11Q8TF27 550 aa13.78□□□□□ -0.2
VPS26A-205ENST00000489656 GAB3Q8WWW8 586 aa13.78□□□□□ -0.2
VPS26A-205ENST00000489656 NELL1Q92832 810 aa13.78□□□□□ -0.2
VPS26A-205ENST00000489656 RAD51AP1Q96B01 352 aa13.78□□□□□ -0.2
VPS26A-205ENST00000489656 FAR2Q96K12 515 aa13.78□□□□□ -0.2
VPS26A-205ENST00000489656 NSUN5Q96P11 429 aaKnown RBP13.78□□□□□ -0.2
VPS26A-205ENST00000489656 ZNF382Q96SR6 550 aa13.78□□□□□ -0.2
VPS26A-205ENST00000489656 PKP4Q99569 1192 aa13.78□□□□□ -0.2
VPS26A-205ENST00000489656 HGH1Q9BTY7 390 aa13.78□□□□□ -0.2
VPS26A-205ENST00000489656 OSGEPL1Q9H4B0 414 aa13.78□□□□□ -0.2
VPS26A-205ENST00000489656 SLC32A1Q9H598 525 aa13.78□□□□□ -0.2
VPS26A-205ENST00000489656 STN1Q9H668 368 aaKnown RBP13.78□□□□□ -0.2
VPS26A-205ENST00000489656 KCNK13Q9HB14 408 aa13.78□□□□□ -0.2
VPS26A-205ENST00000489656 STOX2Q9P2F5 926 aaPredicted RBP13.78□□□□□ -0.2
VPS26A-205ENST00000489656 OPTCQ9UBM4 332 aa13.78□□□□□ -0.2
VPS26A-205ENST00000489656 VTI1BQ9UEU0 232 aa13.78□□□□□ -0.2
VPS26A-205ENST00000489656 ZDHHC2Q9UIJ5 367 aa13.78□□□□□ -0.2
VPS26A-205ENST00000489656 PSMD13Q9UNM6 376 aa13.78□□□□□ -0.2
VPS26A-205ENST00000489656 ASF1AQ9Y294 204 aa13.78□□□□□ -0.2
VPS26A-205ENST00000489656 ARL2BPQ9Y2Y0 163 aa13.78□□□□□ -0.2
VPS26A-205ENST00000489656 USH1CQ9Y6N9 552 aa13.78□□□□□ -0.2
VPS26A-205ENST00000489656 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.77□□□□□ -0.21
VPS26A-205ENST00000489656 A6NCN8 305 aa13.77□□□□□ -0.21
VPS26A-205ENST00000489656 TLR4O00206 839 aa13.77□□□□□ -0.21
VPS26A-205ENST00000489656 MATN2O00339 956 aa13.77□□□□□ -0.21
VPS26A-205ENST00000489656 ERGP11308 486 aa13.77□□□□□ -0.21
VPS26A-205ENST00000489656 IMPA1P29218 277 aa13.77□□□□□ -0.21
VPS26A-205ENST00000489656 CSTF1Q05048 431 aaKnown RBP13.77□□□□□ -0.21
VPS26A-205ENST00000489656 GRB7Q14451 532 aa13.77□□□□□ -0.21
VPS26A-205ENST00000489656 C18orf21Q32NC0 220 aaPredicted RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms