RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 NAT14Q8WUY8 206 aa10.32□□□□□ -0.76
SCAMP4-208ENST00000489554 NCSTNQ92542 709 aa10.32□□□□□ -0.76
SCAMP4-208ENST00000489554 ULK4Q96C45 1275 aa10.32□□□□□ -0.76
SCAMP4-208ENST00000489554 BIRC8Q96P09 236 aa10.32□□□□□ -0.76
SCAMP4-208ENST00000489554 TAAR9Q96RI9 348 aa10.32□□□□□ -0.76
SCAMP4-208ENST00000489554 CCNL2Q96S94 520 aaPredicted RBP10.32□□□□□ -0.76
SCAMP4-208ENST00000489554 RBBP8Q99708 897 aa10.32□□□□□ -0.76
SCAMP4-208ENST00000489554 CPNE1Q99829 537 aa10.32□□□□□ -0.76
SCAMP4-208ENST00000489554 DDA1Q9BW61 102 aa10.32□□□□□ -0.76
SCAMP4-208ENST00000489554 CPNE5Q9HCH3 593 aa10.32□□□□□ -0.76
SCAMP4-208ENST00000489554 PPANQ9NQ55 473 aaKnown RBP10.32□□□□□ -0.76
SCAMP4-208ENST00000489554 TMEM9Q9P0T7 183 aa10.32□□□□□ -0.76
SCAMP4-208ENST00000489554 SCHIP1Q9P0W5 487 aaPredicted RBP10.32□□□□□ -0.76
SCAMP4-208ENST00000489554 ZNF624Q9P2J8 865 aaPredicted RBP10.32□□□□□ -0.76
SCAMP4-208ENST00000489554 LGALS13Q9UHV8 139 aa10.32□□□□□ -0.76
SCAMP4-208ENST00000489554 SLC24A2Q9UI40 661 aa10.32□□□□□ -0.76
SCAMP4-208ENST00000489554 ZNF180Q9UJW8 692 aa10.32□□□□□ -0.76
SCAMP4-208ENST00000489554 PCDHB11Q9Y5F2 797 aa10.32□□□□□ -0.76
SCAMP4-208ENST00000489554 PCDHGA3Q9Y5H0 932 aa10.32□□□□□ -0.76
SCAMP4-208ENST00000489554 PRSS21Q9Y6M0 314 aa10.32□□□□□ -0.76
SCAMP4-208ENST00000489554 SLC30A1Q9Y6M5 507 aa10.32□□□□□ -0.76
SCAMP4-208ENST00000489554 KIF26BQ2KJY2 2108 aa10.31□□□□□ -0.76
SCAMP4-208ENST00000489554 FOXO6A8MYZ6 492 aa10.31□□□□□ -0.76
SCAMP4-208ENST00000489554 C9orf172C9J069 976 aa10.31□□□□□ -0.76
SCAMP4-208ENST00000489554 POC1B-GALNT4F8VUJ3 575 aa10.31□□□□□ -0.76
SCAMP4-208ENST00000489554 H3BQF6 201 aa10.31□□□□□ -0.76
SCAMP4-208ENST00000489554 K7ENP7 123 aa10.31□□□□□ -0.76
SCAMP4-208ENST00000489554 TK2O00142 265 aa10.31□□□□□ -0.76
SCAMP4-208ENST00000489554 ATXN7O15265 892 aaPredicted RBP10.31□□□□□ -0.76
SCAMP4-208ENST00000489554 POP7O75817 140 aaKnown RBP10.31□□□□□ -0.76
SCAMP4-208ENST00000489554 RALBP11234 206 aa10.31□□□□□ -0.76
SCAMP4-208ENST00000489554 FGF3P11487 239 aaPredicted RBP10.31□□□□□ -0.76
SCAMP4-208ENST00000489554 BRAFP15056 766 aa10.31□□□□□ -0.76
SCAMP4-208ENST00000489554 MPSTP25325 297 aa10.31□□□□□ -0.76
SCAMP4-208ENST00000489554 RPL10P27635 214 aaKnown RBP10.31□□□□□ -0.76
SCAMP4-208ENST00000489554 GP5P40197 560 aa10.31□□□□□ -0.76
SCAMP4-208ENST00000489554 SLC19A1P41440 591 aa10.31□□□□□ -0.76
SCAMP4-208ENST00000489554 MAPK9P45984 424 aa10.31□□□□□ -0.76
SCAMP4-208ENST00000489554 SLCO1A2P46721 670 aa10.31□□□□□ -0.76
SCAMP4-208ENST00000489554 CTSCP53634 463 aa10.31□□□□□ -0.76
SCAMP4-208ENST00000489554 CSE1LP55060 971 aaKnown RBP10.31□□□□□ -0.76
SCAMP4-208ENST00000489554 RAB15P59190 212 aa10.31□□□□□ -0.76
SCAMP4-208ENST00000489554 THOC5Q13769 683 aaKnown RBP10.31□□□□□ -0.76
SCAMP4-208ENST00000489554 CEP85LQ5SZL2 805 aa10.31□□□□□ -0.76
SCAMP4-208ENST00000489554 RBM20Q5T481 1227 aaKnown RBP10.31□□□□□ -0.76
SCAMP4-208ENST00000489554 ARHGAP40Q5TG30 622 aa10.31□□□□□ -0.76
SCAMP4-208ENST00000489554 MRNIPQ6NTE8 343 aa10.31□□□□□ -0.76
SCAMP4-208ENST00000489554 INO80CQ6PI98 192 aaPredicted RBP10.31□□□□□ -0.76
SCAMP4-208ENST00000489554 TMEM220Q6QAJ8 160 aa10.31□□□□□ -0.76
SCAMP4-208ENST00000489554 XKR5Q6UX68 686 aa10.31□□□□□ -0.76
SCAMP4-208ENST00000489554 CCDC81Q6ZN84 652 aa10.31□□□□□ -0.76
SCAMP4-208ENST00000489554 ARHGAP22Q7Z5H3 698 aa10.31□□□□□ -0.76
SCAMP4-208ENST00000489554 STRA8Q7Z7C7 330 aa10.31□□□□□ -0.76
SCAMP4-208ENST00000489554 CALML6Q8TD86 181 aa10.31□□□□□ -0.76
SCAMP4-208ENST00000489554 HEXDCQ8WVB3 486 aa10.31□□□□□ -0.76
SCAMP4-208ENST00000489554 ISL2Q96A47 359 aa10.31□□□□□ -0.76
SCAMP4-208ENST00000489554 CXorf40BQ96DE9 158 aa10.31□□□□□ -0.76
SCAMP4-208ENST00000489554 MRRFQ96E11 262 aaKnown RBP10.31□□□□□ -0.76
SCAMP4-208ENST00000489554 ATP6V1G3Q96LB4 118 aa10.31□□□□□ -0.76
SCAMP4-208ENST00000489554 TCF12Q99081 682 aa10.31□□□□□ -0.76
SCAMP4-208ENST00000489554 TBC1D10AQ9BXI6 508 aa10.31□□□□□ -0.76
SCAMP4-208ENST00000489554 ASPSCR1Q9BZE9 553 aa10.31□□□□□ -0.76
SCAMP4-208ENST00000489554 RHOJQ9H4E5 214 aa10.31□□□□□ -0.76
SCAMP4-208ENST00000489554 SLC40A1Q9NP59 571 aa10.31□□□□□ -0.76
SCAMP4-208ENST00000489554 INTS10Q9NVR2 710 aaKnown RBP10.31□□□□□ -0.76
SCAMP4-208ENST00000489554 ZDHHC3Q9NYG2 299 aa10.31□□□□□ -0.76
SCAMP4-208ENST00000489554 FOXJ2Q9P0K8 574 aa10.31□□□□□ -0.76
SCAMP4-208ENST00000489554 CRLS1Q9UJA2 301 aa10.31□□□□□ -0.76
SCAMP4-208ENST00000489554 MTO1Q9Y2Z2 717 aaKnown RBP10.31□□□□□ -0.76
SCAMP4-208ENST00000489554 MN1Q10571 1320 aaPredicted RBP10.31□□□□□ -0.76
SCAMP4-208ENST00000489554 PIKFYVEQ9Y2I7 2098 aa10.3□□□□□ -0.76
SCAMP4-208ENST00000489554 ZFC3H1O60293 1989 aaKnown RBP10.3□□□□□ -0.76
SCAMP4-208ENST00000489554 OR2AG2A6NM03 316 aa10.3□□□□□ -0.76
SCAMP4-208ENST00000489554 EFCAB7A8K855 629 aa10.3□□□□□ -0.76
SCAMP4-208ENST00000489554 CFAP99D6REC4 459 aa10.3□□□□□ -0.76
SCAMP4-208ENST00000489554 STMND1H3BQB6 276 aa10.3□□□□□ -0.76
SCAMP4-208ENST00000489554 ERVH48-1M5A8F1 160 aa10.3□□□□□ -0.76
SCAMP4-208ENST00000489554 TOX3O15405 576 aaPredicted RBP10.3□□□□□ -0.76
SCAMP4-208ENST00000489554 UBXN7O94888 489 aa10.3□□□□□ -0.76
SCAMP4-208ENST00000489554 WISP3O95389 354 aaPredicted RBP10.3□□□□□ -0.76
SCAMP4-208ENST00000489554 ANKRD34CP0C6C1 535 aa10.3□□□□□ -0.76
SCAMP4-208ENST00000489554 AMD1P17707 334 aa10.3□□□□□ -0.76
SCAMP4-208ENST00000489554 RPS3P23396 243 aaKnown RBP eCLIP10.3□□□□□ -0.762e-7■□□□□ 10.7
SCAMP4-208ENST00000489554 MSH2P43246 934 aa10.3□□□□□ -0.76
SCAMP4-208ENST00000489554 MAGEA12P43365 314 aa10.3□□□□□ -0.76
SCAMP4-208ENST00000489554 CD151P48509 253 aa10.3□□□□□ -0.76
SCAMP4-208ENST00000489554 TTPAP49638 278 aa10.3□□□□□ -0.76
SCAMP4-208ENST00000489554 PGGT1BP53609 377 aa10.3□□□□□ -0.76
SCAMP4-208ENST00000489554 ADARP55265 1226 aaKnown RBP10.3□□□□□ -0.76
SCAMP4-208ENST00000489554 BMPR2Q13873 1038 aa10.3□□□□□ -0.76
SCAMP4-208ENST00000489554 ITIH4Q14624 930 aa10.3□□□□□ -0.76
SCAMP4-208ENST00000489554 ZNF658BQ4V348 819 aaPredicted RBP10.3□□□□□ -0.76
SCAMP4-208ENST00000489554 BCL7AQ4VC05 210 aa10.3□□□□□ -0.76
SCAMP4-208ENST00000489554 SNAP47Q5SQN1 464 aa10.3□□□□□ -0.76
SCAMP4-208ENST00000489554 DCAF12Q5T6F0 453 aa10.3□□□□□ -0.76
SCAMP4-208ENST00000489554 GRTP1Q5TC63 336 aa10.3□□□□□ -0.76
SCAMP4-208ENST00000489554 CERS6Q6ZMG9 384 aa10.3□□□□□ -0.76
SCAMP4-208ENST00000489554 SH2D5Q6ZV89 423 aa10.3□□□□□ -0.76
SCAMP4-208ENST00000489554 TAS2R42Q7RTR8 314 aa10.3□□□□□ -0.76
SCAMP4-208ENST00000489554 ZFAND4Q86XD8 727 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms