RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 PBLDP30039 288 aaPredicted RBP8.82□□□□□ -1
SSBP1-212ENST00000489378 MIPP30301 263 aa8.82□□□□□ -1
SSBP1-212ENST00000489378 SOX11P35716 441 aa8.82□□□□□ -1
SSBP1-212ENST00000489378 GABRA4P48169 554 aa8.82□□□□□ -1
SSBP1-212ENST00000489378 FOLH1Q04609 750 aa8.82□□□□□ -1
SSBP1-212ENST00000489378 GTF2H3Q13889 308 aa8.82□□□□□ -1
SSBP1-212ENST00000489378 MAN2A1Q16706 1144 aa8.82□□□□□ -1
SSBP1-212ENST00000489378 ATP13A5Q4VNC0 1218 aa8.82□□□□□ -1
SSBP1-212ENST00000489378 METRNLQ641Q3 311 aa8.82□□□□□ -1
SSBP1-212ENST00000489378 Q6ZPB1 254 aaPredicted RBP8.82□□□□□ -1
SSBP1-212ENST00000489378 TMC3Q7Z5M5 1100 aa8.82□□□□□ -1
SSBP1-212ENST00000489378 BEND7Q8N7W2 519 aaPredicted RBP8.82□□□□□ -1
SSBP1-212ENST00000489378 RASGEF1AQ8N9B8 481 aa8.82□□□□□ -1
SSBP1-212ENST00000489378 DNAAF3Q8N9W5 541 aa8.82□□□□□ -1
SSBP1-212ENST00000489378 GDAP1Q8TB36 358 aa8.82□□□□□ -1
SSBP1-212ENST00000489378 CA5BP1Q8WTZ4 195 aa8.82□□□□□ -1
SSBP1-212ENST00000489378 PSMF1Q92530 271 aa8.82□□□□□ -1
SSBP1-212ENST00000489378 SDCCAG3Q96C92 435 aa8.82□□□□□ -1
SSBP1-212ENST00000489378 ARSGQ96EG1 525 aa8.82□□□□□ -1
SSBP1-212ENST00000489378 MAGED4Q96JG8 741 aa8.82□□□□□ -1
SSBP1-212ENST00000489378 ZNF559Q9BR84 538 aa8.82□□□□□ -1
SSBP1-212ENST00000489378 NDST4Q9H3R1 872 aa8.82□□□□□ -1
SSBP1-212ENST00000489378 PTGFRNQ9P2B2 879 aa8.82□□□□□ -1
SSBP1-212ENST00000489378 RWDD2AQ9UIY3 292 aa8.82□□□□□ -1
SSBP1-212ENST00000489378 SNRNP200O75643 2136 aaKnown RBP8.81□□□□□ -1
SSBP1-212ENST00000489378 OR2AG2A6NM03 316 aa8.81□□□□□ -1
SSBP1-212ENST00000489378 H3BRJ5 948 aa8.81□□□□□ -1
SSBP1-212ENST00000489378 ZSCAN9O15535 394 aaPredicted RBP8.81□□□□□ -1
SSBP1-212ENST00000489378 PRAMEF2O60811 474 aa8.81□□□□□ -1
SSBP1-212ENST00000489378 MMP2P08253 660 aa8.81□□□□□ -1
SSBP1-212ENST00000489378 UGT1A4P22310 534 aa8.81□□□□□ -1
SSBP1-212ENST00000489378 CA4P22748 312 aa8.81□□□□□ -1
SSBP1-212ENST00000489378 ZIC1Q15915 447 aa8.81□□□□□ -1
SSBP1-212ENST00000489378 RBBP7Q16576 425 aa8.81□□□□□ -1
SSBP1-212ENST00000489378 NKG7Q16617 165 aa8.81□□□□□ -1
SSBP1-212ENST00000489378 VWA3BQ502W6 1294 aa8.81□□□□□ -1
SSBP1-212ENST00000489378 ERICH6BQ5W0A0 696 aa8.81□□□□□ -1
SSBP1-212ENST00000489378 C3P1Q6ZMU1 363 aa8.81□□□□□ -1
SSBP1-212ENST00000489378 C1orf229Q6ZS94 237 aaPredicted RBP8.81□□□□□ -1
SSBP1-212ENST00000489378 POLNQ7Z5Q5 900 aa8.81□□□□□ -1
SSBP1-212ENST00000489378 TRIM73Q86UV7 250 aa8.81□□□□□ -1
SSBP1-212ENST00000489378 SPPL2CQ8IUH8 684 aa8.81□□□□□ -1
SSBP1-212ENST00000489378 LCN9Q8WX39 176 aa8.81□□□□□ -1
SSBP1-212ENST00000489378 N4BP2L2Q92802 583 aaPredicted RBP8.81□□□□□ -1
SSBP1-212ENST00000489378 HAS2Q92819 552 aa8.81□□□□□ -1
SSBP1-212ENST00000489378 NINJ1Q92982 152 aa8.81□□□□□ -1
SSBP1-212ENST00000489378 RMDN2Q96LZ7 410 aa8.81□□□□□ -1
SSBP1-212ENST00000489378 CSPG4P5Q96PW8 444 aa8.81□□□□□ -1
SSBP1-212ENST00000489378 VPS35Q96QK1 796 aa8.81□□□□□ -1
SSBP1-212ENST00000489378 TRIM7Q9C029 511 aa8.81□□□□□ -1
SSBP1-212ENST00000489378 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.81□□□□□ -1
SSBP1-212ENST00000489378 GANQ9H2C0 597 aa8.81□□□□□ -1
SSBP1-212ENST00000489378 SRMSQ9H3Y6 488 aa8.81□□□□□ -1
SSBP1-212ENST00000489378 ZWILCHQ9H900 591 aa8.81□□□□□ -1
SSBP1-212ENST00000489378 ZNF160Q9HCG1 818 aa8.81□□□□□ -1
SSBP1-212ENST00000489378 TXLNGQ9NUQ3 528 aa8.81□□□□□ -1
SSBP1-212ENST00000489378 RBM22Q9NW64 420 aaKnown RBP eCLIP8.81□□□□□ -12e-10■■■■□ 23.7
SSBP1-212ENST00000489378 CPAMD8Q8IZJ3 1885 aa8.81□□□□□ -1
SSBP1-212ENST00000489378 MATN2O00339 956 aa8.8□□□□□ -1
SSBP1-212ENST00000489378 ADAM10O14672 748 aa8.8□□□□□ -1
SSBP1-212ENST00000489378 GPR39O43194 453 aa8.8□□□□□ -1
SSBP1-212ENST00000489378 WDPCPO95876 746 aa8.8□□□□□ -1
SSBP1-212ENST00000489378 MT-CYBP00156 380 aaPredicted RBP8.8□□□□□ -1
SSBP1-212ENST00000489378 PROCP04070 461 aa8.8□□□□□ -1
SSBP1-212ENST00000489378 HLA-DQB2P05538 268 aa8.8□□□□□ -1
SSBP1-212ENST00000489378 C8BP07358 591 aa8.8□□□□□ -1
SSBP1-212ENST00000489378 DESP17661 470 aa8.8□□□□□ -1
SSBP1-212ENST00000489378 CES1P23141 567 aa8.8□□□□□ -1
SSBP1-212ENST00000489378 SOX5P35711 763 aa8.8□□□□□ -1
SSBP1-212ENST00000489378 MEOX1P50221 254 aa8.8□□□□□ -1
SSBP1-212ENST00000489378 ZNF135P52742 658 aaPredicted RBP8.8□□□□□ -1
SSBP1-212ENST00000489378 FAM182AQ5T1J6 154 aa8.8□□□□□ -1
SSBP1-212ENST00000489378 TMEM220Q6QAJ8 160 aa8.8□□□□□ -1
SSBP1-212ENST00000489378 COX15Q7KZN9 410 aa8.8□□□□□ -1
SSBP1-212ENST00000489378 OVCH1Q7RTY7 1134 aa8.8□□□□□ -1
SSBP1-212ENST00000489378 PSTKQ8IV42 348 aaKnown RBP8.8□□□□□ -1
SSBP1-212ENST00000489378 SIRT6Q8N6T7 355 aa8.8□□□□□ -1
SSBP1-212ENST00000489378 C19orf47Q8N9M1 422 aaKnown RBP8.8□□□□□ -1
SSBP1-212ENST00000489378 LRRN4CLQ8ND94 238 aa8.8□□□□□ -1
SSBP1-212ENST00000489378 BRIX1Q8TDN6 353 aaKnown RBP8.8□□□□□ -1
SSBP1-212ENST00000489378 AGAP11Q8TF27 550 aa8.8□□□□□ -1
SSBP1-212ENST00000489378 NAT14Q8WUY8 206 aa8.8□□□□□ -1
SSBP1-212ENST00000489378 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.8□□□□□ -1
SSBP1-212ENST00000489378 MAML1Q92585 1016 aa8.8□□□□□ -1
SSBP1-212ENST00000489378 FKBP10Q96AY3 582 aa8.8□□□□□ -1
SSBP1-212ENST00000489378 TTC25Q96NG3 672 aa8.8□□□□□ -1
SSBP1-212ENST00000489378 DMRTA2Q96SC8 542 aa8.8□□□□□ -1
SSBP1-212ENST00000489378 TUBGCP2Q9BSJ2 902 aa8.8□□□□□ -1
SSBP1-212ENST00000489378 TSPAN10Q9H1Z9 355 aaPredicted RBP8.8□□□□□ -1
SSBP1-212ENST00000489378 CLSTN2Q9H4D0 955 aa8.8□□□□□ -1
SSBP1-212ENST00000489378 SOX17Q9H6I2 414 aaPredicted RBP8.8□□□□□ -1
SSBP1-212ENST00000489378 MRM3Q9HC36 420 aaKnown RBP8.8□□□□□ -1
SSBP1-212ENST00000489378 RAD18Q9NS91 495 aa8.8□□□□□ -1
SSBP1-212ENST00000489378 SEPT11Q9NVA2 429 aaKnown RBP8.8□□□□□ -1
SSBP1-212ENST00000489378 FAM8A1Q9UBU6 413 aa8.8□□□□□ -1
SSBP1-212ENST00000489378 ST6GALNAC2Q9UJ37 374 aa8.8□□□□□ -1
SSBP1-212ENST00000489378 ZNF711Q9Y462 761 aa8.8□□□□□ -1
SSBP1-212ENST00000489378 AURKAO14965 403 aa8.8□□□□□ -1
SSBP1-212ENST00000489378 USP1O94782 785 aa8.8□□□□□ -1
SSBP1-212ENST00000489378 PRAMEF1O95521 474 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms