RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 DCUN1D3Q8IWE4 304 aa8.85□□□□□ -0.99
HDAC6-232ENST00000489053 KRT222Q8N1A0 295 aa8.85□□□□□ -0.99
HDAC6-232ENST00000489053 RASGEF1CQ8N431 466 aa8.85□□□□□ -0.99
HDAC6-232ENST00000489053 D2HGDHQ8N465 521 aa8.85□□□□□ -0.99
HDAC6-232ENST00000489053 ACTRT1Q8TDG2 376 aa8.85□□□□□ -0.99
HDAC6-232ENST00000489053 TTC9Q92623 222 aa8.85□□□□□ -0.99
HDAC6-232ENST00000489053 SLC22A18Q96BI1 424 aa8.85□□□□□ -0.99
HDAC6-232ENST00000489053 ZNF669Q96BR6 464 aaPredicted RBP8.85□□□□□ -0.99
HDAC6-232ENST00000489053 SGSM3Q96HU1 749 aa8.85□□□□□ -0.99
HDAC6-232ENST00000489053 CAPZA3Q96KX2 299 aa8.85□□□□□ -0.99
HDAC6-232ENST00000489053 RUNDC3BQ96NL0 473 aa8.85□□□□□ -0.99
HDAC6-232ENST00000489053 TCF12Q99081 682 aa8.85□□□□□ -0.99
HDAC6-232ENST00000489053 KIFC1Q9BW19 673 aa8.85□□□□□ -0.99
HDAC6-232ENST00000489053 RAB11FIP5Q9BXF6 653 aa8.85□□□□□ -0.99
HDAC6-232ENST00000489053 TWSG1Q9GZX9 223 aa8.85□□□□□ -0.99
HDAC6-232ENST00000489053 KLHL25Q9H0H3 589 aa8.85□□□□□ -0.99
HDAC6-232ENST00000489053 TSR3Q9UJK0 312 aaKnown RBP8.85□□□□□ -0.99
HDAC6-232ENST00000489053 PLAGL1Q9UM63 463 aa8.85□□□□□ -0.99
HDAC6-232ENST00000489053 SNX12Q9UMY4 172 aa8.85□□□□□ -0.99
HDAC6-232ENST00000489053 SOX13Q9UN79 622 aa8.85□□□□□ -0.99
HDAC6-232ENST00000489053 BTRCQ9Y297 605 aa8.85□□□□□ -0.99
HDAC6-232ENST00000489053 HELZ2Q9BYK8 2649 aaKnown RBP8.85□□□□□ -0.99
HDAC6-232ENST00000489053 BOD1L1Q8NFC6 3051 aa8.85□□□□□ -0.99
HDAC6-232ENST00000489053 TLN1Q9Y490 2541 aaKnown RBP8.85□□□□□ -0.99
HDAC6-232ENST00000489053 SCN8AQ9UQD0 1980 aa8.84□□□□□ -0.99
HDAC6-232ENST00000489053 A0A0J9YY10 115 aa8.84□□□□□ -0.99
HDAC6-232ENST00000489053 SLC5A10A0PJK1 596 aa8.84□□□□□ -0.99
HDAC6-232ENST00000489053 CDC14CA4D256 554 aa8.84□□□□□ -0.99
HDAC6-232ENST00000489053 PABPN1LA6NDY0 278 aaKnown RBP8.84□□□□□ -0.99
HDAC6-232ENST00000489053 C21orf140B9A014 251 aa8.84□□□□□ -0.99
HDAC6-232ENST00000489053 GOLGA8KD6RF30 607 aa8.84□□□□□ -0.99
HDAC6-232ENST00000489053 GOLGA8TH3BQL2 631 aa8.84□□□□□ -0.99
HDAC6-232ENST00000489053 BTN3A3O00478 584 aa8.84□□□□□ -0.99
HDAC6-232ENST00000489053 CES2O00748 559 aa8.84□□□□□ -0.99
HDAC6-232ENST00000489053 NKX2-8O15522 239 aa8.84□□□□□ -0.99
HDAC6-232ENST00000489053 AVILO75366 819 aa8.84□□□□□ -0.99
HDAC6-232ENST00000489053 ESR1P03372 595 aa8.84□□□□□ -0.99
HDAC6-232ENST00000489053 CHRM5P08912 532 aaPredicted RBP8.84□□□□□ -0.99
HDAC6-232ENST00000489053 ATXN8OSP0DMR3 200 aa8.84□□□□□ -0.99
HDAC6-232ENST00000489053 UGT2B7P16662 529 aa8.84□□□□□ -0.99
HDAC6-232ENST00000489053 ZNF28P17035 718 aa8.84□□□□□ -0.99
HDAC6-232ENST00000489053 OGNP20774 298 aaKnown RBP8.84□□□□□ -0.99
HDAC6-232ENST00000489053 AGXTP21549 392 aa8.84□□□□□ -0.99
HDAC6-232ENST00000489053 RPS3P23396 243 aaKnown RBP eCLIP8.84□□□□□ -0.99
HDAC6-232ENST00000489053 FMO4P31512 558 aa8.84□□□□□ -0.99
HDAC6-232ENST00000489053 CCR7P32248 378 aa8.84□□□□□ -0.99
HDAC6-232ENST00000489053 RAB28P51157 221 aa8.84□□□□□ -0.99
HDAC6-232ENST00000489053 ITGA1P56199 1179 aa8.84□□□□□ -0.99
HDAC6-232ENST00000489053 NFATC3Q12968 1075 aa8.84□□□□□ -0.99
HDAC6-232ENST00000489053 DNASE1L3Q13609 305 aa8.84□□□□□ -0.99
HDAC6-232ENST00000489053 ERV3-1Q14264 604 aa8.84□□□□□ -0.99
HDAC6-232ENST00000489053 KCNJ11Q14654 390 aa8.84□□□□□ -0.99
HDAC6-232ENST00000489053 KIR2DS3Q14952 304 aa8.84□□□□□ -0.99
HDAC6-232ENST00000489053 ZNF470Q6ECI4 717 aa8.84□□□□□ -0.99
HDAC6-232ENST00000489053 KIAA0930Q6ICG6 404 aaPredicted RBP8.84□□□□□ -0.99
HDAC6-232ENST00000489053 NEPROQ6NW34 567 aa8.84□□□□□ -0.99
HDAC6-232ENST00000489053 TTC27Q6P3X3 843 aa8.84□□□□□ -0.99
HDAC6-232ENST00000489053 FBXO38Q6PIJ6 1188 aa8.84□□□□□ -0.99
HDAC6-232ENST00000489053 UNC5AQ6ZN44 842 aa8.84□□□□□ -0.99
HDAC6-232ENST00000489053 MICALCLQ6ZW33 695 aa8.84□□□□□ -0.99
HDAC6-232ENST00000489053 TIPARPQ7Z3E1 657 aaKnown RBP8.84□□□□□ -0.99
HDAC6-232ENST00000489053 PCGF5Q86SE9 256 aa8.84□□□□□ -0.99
HDAC6-232ENST00000489053 PPIL6Q8IXY8 311 aa8.84□□□□□ -0.99
HDAC6-232ENST00000489053 COL27A1Q8IZC6 1860 aaPredicted RBP8.84□□□□□ -0.99
HDAC6-232ENST00000489053 SLC22A15Q8IZD6 547 aa8.84□□□□□ -0.99
HDAC6-232ENST00000489053 C19orf47Q8N9M1 422 aaKnown RBP8.84□□□□□ -0.99
HDAC6-232ENST00000489053 MCUQ8NE86 351 aa8.84□□□□□ -0.99
HDAC6-232ENST00000489053 CALML6Q8TD86 181 aa8.84□□□□□ -0.99
HDAC6-232ENST00000489053 COG1Q8WTW3 980 aa8.84□□□□□ -0.99
HDAC6-232ENST00000489053 APOBEC4Q8WW27 367 aaKnown RBP8.84□□□□□ -0.99
HDAC6-232ENST00000489053 RAD51AP1Q96B01 352 aa8.84□□□□□ -0.99
HDAC6-232ENST00000489053 MFSD3Q96ES6 412 aa8.84□□□□□ -0.99
HDAC6-232ENST00000489053 TCTN2Q96GX1 697 aa8.84□□□□□ -0.99
HDAC6-232ENST00000489053 NAPGQ99747 312 aaPredicted RBP8.84□□□□□ -0.99
HDAC6-232ENST00000489053 C17orf62Q9BQA9 187 aa8.84□□□□□ -0.99
HDAC6-232ENST00000489053 GPR87Q9BY21 358 aa8.84□□□□□ -0.99
HDAC6-232ENST00000489053 ACTR5Q9H9F9 607 aaPredicted RBP8.84□□□□□ -0.99
HDAC6-232ENST00000489053 LHX9Q9NQ69 397 aa8.84□□□□□ -0.99
HDAC6-232ENST00000489053 LATS2Q9NRM7 1088 aa8.84□□□□□ -0.99
HDAC6-232ENST00000489053 TREX1Q9NSU2 369 aa8.84□□□□□ -0.99
HDAC6-232ENST00000489053 C20orf96Q9NUD7 363 aaPredicted RBP8.84□□□□□ -0.99
HDAC6-232ENST00000489053 TXLNGQ9NUQ3 528 aa8.84□□□□□ -0.99
HDAC6-232ENST00000489053 BAHCC1Q9P281 2608 aa8.84□□□□□ -0.99
HDAC6-232ENST00000489053 MARCH4Q9P2E8 410 aaPredicted RBP8.84□□□□□ -0.99
HDAC6-232ENST00000489053 IL17BQ9UHF5 180 aa8.84□□□□□ -0.99
HDAC6-232ENST00000489053 GPN3Q9UHW5 284 aaPredicted RBP8.84□□□□□ -0.99
HDAC6-232ENST00000489053 G3BP2Q9UN86 482 aaKnown RBP8.84□□□□□ -0.99
HDAC6-232ENST00000489053 ICKQ9UPZ9 632 aa8.84□□□□□ -0.99
HDAC6-232ENST00000489053 PADI2Q9Y2J8 665 aa8.84□□□□□ -0.99
HDAC6-232ENST00000489053 ZFC3H1O60293 1989 aaKnown RBP8.84□□□□□ -0.99
HDAC6-232ENST00000489053 MYO18BQ8IUG5 2567 aa8.83□□□□□ -1
HDAC6-232ENST00000489053 FAM237BA0A1B0GVD1 139 aa8.83□□□□□ -1
HDAC6-232ENST00000489053 TCRBV7S3A2A0A539 114 aa8.83□□□□□ -1
HDAC6-232ENST00000489053 IQCF5A8MTL0 148 aa8.83□□□□□ -1
HDAC6-232ENST00000489053 BHMG1C9JSJ3 638 aaPredicted RBP8.83□□□□□ -1
HDAC6-232ENST00000489053 NDC80O14777 642 aa8.83□□□□□ -1
HDAC6-232ENST00000489053 OR2B3O76000 313 aa8.83□□□□□ -1
HDAC6-232ENST00000489053 ST6GAL1P15907 406 aa8.83□□□□□ -1
HDAC6-232ENST00000489053 AOAHP28039 575 aa8.83□□□□□ -1
HDAC6-232ENST00000489053 ACADLP28330 430 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms