RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 FAM60AQ9NP50 221 aa11.55□□□□□ -0.56
CCHCR1-215ENST00000488920 CATSPERZQ9NTU4 200 aa11.55□□□□□ -0.56
CCHCR1-215ENST00000488920 POLG2Q9UHN1 485 aa11.55□□□□□ -0.56
CCHCR1-215ENST00000488920 TLK1Q9UKI8 766 aa11.55□□□□□ -0.56
CCHCR1-215ENST00000488920 TP53TG5Q9Y2B4 290 aa11.55□□□□□ -0.56
CCHCR1-215ENST00000488920 MAN2B2Q9Y2E5 1009 aa11.55□□□□□ -0.56
CCHCR1-215ENST00000488920 SPTA1P02549 2419 aa11.55□□□□□ -0.56
CCHCR1-215ENST00000488920 FLNBO75369 2602 aaKnown RBP11.54□□□□□ -0.56
CCHCR1-215ENST00000488920 F8W8V4 182 aa11.54□□□□□ -0.56
CCHCR1-215ENST00000488920 MKRN2OSH3BPM6 223 aa11.54□□□□□ -0.56
CCHCR1-215ENST00000488920 CD3EAPO15446 510 aaKnown RBP11.54□□□□□ -0.56
CCHCR1-215ENST00000488920 DNAJB5O75953 348 aa11.54□□□□□ -0.56
CCHCR1-215ENST00000488920 MSL3P1P0C860 447 aa11.54□□□□□ -0.56
CCHCR1-215ENST00000488920 NMBRP28336 390 aa11.54□□□□□ -0.56
CCHCR1-215ENST00000488920 RORAP35398 523 aa11.54□□□□□ -0.56
CCHCR1-215ENST00000488920 PPARGP37231 505 aaPredicted RBP11.54□□□□□ -0.56
CCHCR1-215ENST00000488920 NPY2RP49146 381 aa11.54□□□□□ -0.56
CCHCR1-215ENST00000488920 TERF1P54274 439 aa11.54□□□□□ -0.56
CCHCR1-215ENST00000488920 PMS2P54278 862 aa11.54□□□□□ -0.56
CCHCR1-215ENST00000488920 PLOD1Q02809 727 aaPredicted RBP11.54□□□□□ -0.56
CCHCR1-215ENST00000488920 IL10RAQ13651 578 aa11.54□□□□□ -0.56
CCHCR1-215ENST00000488920 ZIC1Q15915 447 aa11.54□□□□□ -0.56
CCHCR1-215ENST00000488920 UGT8Q16880 541 aa11.54□□□□□ -0.56
CCHCR1-215ENST00000488920 PTCHD3Q3KNS1 767 aa11.54□□□□□ -0.56
CCHCR1-215ENST00000488920 IZUMO3Q5VZ72 239 aa11.54□□□□□ -0.56
CCHCR1-215ENST00000488920 C4orf22Q6V702 233 aa11.54□□□□□ -0.56
CCHCR1-215ENST00000488920 ZNF517Q6ZMY9 492 aaPredicted RBP11.54□□□□□ -0.56
CCHCR1-215ENST00000488920 SYVN1Q86TM6 617 aa11.54□□□□□ -0.56
CCHCR1-215ENST00000488920 SLC22A15Q8IZD6 547 aa11.54□□□□□ -0.56
CCHCR1-215ENST00000488920 DSELQ8IZU8 1212 aa11.54□□□□□ -0.56
CCHCR1-215ENST00000488920 KRT222Q8N1A0 295 aa11.54□□□□□ -0.56
CCHCR1-215ENST00000488920 C2orf73Q8N5S3 287 aaPredicted RBP11.54□□□□□ -0.56
CCHCR1-215ENST00000488920 LMNTD1Q8N9Z9 388 aa11.54□□□□□ -0.56
CCHCR1-215ENST00000488920 CFAP61Q8NHU2 1237 aa11.54□□□□□ -0.56
CCHCR1-215ENST00000488920 MAIP1Q8WWC4 291 aa11.54□□□□□ -0.56
CCHCR1-215ENST00000488920 SGSM3Q96HU1 749 aa11.54□□□□□ -0.56
CCHCR1-215ENST00000488920 LRFN5Q96NI6 719 aa11.54□□□□□ -0.56
CCHCR1-215ENST00000488920 SLC7A5P2Q9GIP4 190 aa11.54□□□□□ -0.56
CCHCR1-215ENST00000488920 EPN3Q9H201 632 aa11.54□□□□□ -0.56
CCHCR1-215ENST00000488920 ACTR5Q9H9F9 607 aaPredicted RBP11.54□□□□□ -0.56
CCHCR1-215ENST00000488920 EIF2B3Q9NR50 452 aaKnown RBP11.54□□□□□ -0.56
CCHCR1-215ENST00000488920 PCMTD2Q9NV79 361 aa11.54□□□□□ -0.56
CCHCR1-215ENST00000488920 OR6C2Q9NZP2 312 aa11.54□□□□□ -0.56
CCHCR1-215ENST00000488920 CIDEBQ9UHD4 219 aa11.54□□□□□ -0.56
CCHCR1-215ENST00000488920 ANAPC5Q9UJX4 755 aa11.54□□□□□ -0.56
CCHCR1-215ENST00000488920 CDYLQ9Y232 598 aa11.54□□□□□ -0.56
CCHCR1-215ENST00000488920 ZKSCAN5Q9Y2L8 839 aa11.54□□□□□ -0.56
CCHCR1-215ENST00000488920 TCRBV7S3A2A0A539 114 aa11.53□□□□□ -0.56
CCHCR1-215ENST00000488920 ISM1B1AKI9 464 aa11.53□□□□□ -0.56
CCHCR1-215ENST00000488920 E7EQ34 232 aa11.53□□□□□ -0.56
CCHCR1-215ENST00000488920 ZNF749O43361 778 aa11.53□□□□□ -0.56
CCHCR1-215ENST00000488920 HCRTR1O43613 425 aa11.53□□□□□ -0.56
CCHCR1-215ENST00000488920 GPC4O75487 556 aa11.53□□□□□ -0.56
CCHCR1-215ENST00000488920 RFPL1O75677 317 aa11.53□□□□□ -0.56
CCHCR1-215ENST00000488920 APOA4P06727 396 aa11.53□□□□□ -0.56
CCHCR1-215ENST00000488920 ATXN8OSP0DMR3 200 aa11.53□□□□□ -0.56
CCHCR1-215ENST00000488920 MGAT1P26572 445 aa11.53□□□□□ -0.56
CCHCR1-215ENST00000488920 AOAHP28039 575 aa11.53□□□□□ -0.56
CCHCR1-215ENST00000488920 CASRP41180 1078 aa11.53□□□□□ -0.56
CCHCR1-215ENST00000488920 ITGA1P56199 1179 aa11.53□□□□□ -0.56
CCHCR1-215ENST00000488920 CCZ1BP86790 482 aa11.53□□□□□ -0.56
CCHCR1-215ENST00000488920 CCZ1P86791 482 aaPredicted RBP11.53□□□□□ -0.56
CCHCR1-215ENST00000488920 CHAF1BQ13112 559 aa11.53□□□□□ -0.56
CCHCR1-215ENST00000488920 TRIP13Q15645 432 aaPredicted RBP11.53□□□□□ -0.56
CCHCR1-215ENST00000488920 DEFB110Q30KQ9 67 aa11.53□□□□□ -0.56
CCHCR1-215ENST00000488920 DNAJC21Q5F1R6 531 aaKnown RBP11.53□□□□□ -0.56
CCHCR1-215ENST00000488920 AARS2Q5JTZ9 985 aaKnown RBP11.53□□□□□ -0.56
CCHCR1-215ENST00000488920 PTRHD1Q6GMV3 140 aaKnown RBP11.53□□□□□ -0.56
CCHCR1-215ENST00000488920 CES3Q6UWW8 571 aa11.53□□□□□ -0.56
CCHCR1-215ENST00000488920 ASB18Q6ZVZ8 466 aa11.53□□□□□ -0.56
CCHCR1-215ENST00000488920 FAM20CQ8IXL6 584 aa11.53□□□□□ -0.56
CCHCR1-215ENST00000488920 SYTL1Q8IYJ3 562 aa11.53□□□□□ -0.56
CCHCR1-215ENST00000488920 ENDOVQ8N8Q3 282 aaKnown RBP11.53□□□□□ -0.56
CCHCR1-215ENST00000488920 PRELID2Q8N945 189 aa11.53□□□□□ -0.56
CCHCR1-215ENST00000488920 C19orf47Q8N9M1 422 aaKnown RBP11.53□□□□□ -0.56
CCHCR1-215ENST00000488920 TRIM58Q8NG06 486 aa11.53□□□□□ -0.56
CCHCR1-215ENST00000488920 FLVCR1-AS1Q8TAF5 88 aa11.53□□□□□ -0.56
CCHCR1-215ENST00000488920 ASZ1Q8WWH4 475 aa11.53□□□□□ -0.56
CCHCR1-215ENST00000488920 THAP4Q8WY91 577 aa11.53□□□□□ -0.56
CCHCR1-215ENST00000488920 SEC14L1Q92503 715 aa11.53□□□□□ -0.56
CCHCR1-215ENST00000488920 N4BP2L2Q92802 583 aaPredicted RBP11.53□□□□□ -0.56
CCHCR1-215ENST00000488920 PEX13Q92968 403 aa11.53□□□□□ -0.56
CCHCR1-215ENST00000488920 TCTN2Q96GX1 697 aa11.53□□□□□ -0.56
CCHCR1-215ENST00000488920 CARD6Q9BX69 1037 aa11.53□□□□□ -0.56
CCHCR1-215ENST00000488920 TSSK1BQ9BXA7 367 aa11.53□□□□□ -0.56
CCHCR1-215ENST00000488920 AP1M1Q9BXS5 423 aa11.53□□□□□ -0.56
CCHCR1-215ENST00000488920 TRIM55Q9BYV6 548 aa11.53□□□□□ -0.56
CCHCR1-215ENST00000488920 IL22Q9GZX6 179 aa11.53□□□□□ -0.56
CCHCR1-215ENST00000488920 SPRTNQ9H040 489 aaPredicted RBP11.53□□□□□ -0.56
CCHCR1-215ENST00000488920 TREX1Q9NSU2 369 aa11.53□□□□□ -0.56
CCHCR1-215ENST00000488920 BFARQ9NZS9 450 aa11.53□□□□□ -0.56
CCHCR1-215ENST00000488920 ANAPC2Q9UJX6 822 aa11.53□□□□□ -0.56
CCHCR1-215ENST00000488920 TTC7AQ9ULT0 858 aaPredicted RBP11.53□□□□□ -0.56
CCHCR1-215ENST00000488920 ARGFXA6NJG6 315 aa11.52□□□□□ -0.57
CCHCR1-215ENST00000488920 PRMT5O14744 637 aaPredicted RBP11.52□□□□□ -0.57
CCHCR1-215ENST00000488920 NDUFS3O75489 264 aa11.52□□□□□ -0.57
CCHCR1-215ENST00000488920 OR2B3O76000 313 aa11.52□□□□□ -0.57
CCHCR1-215ENST00000488920 VAPBO95292 243 aa11.52□□□□□ -0.57
CCHCR1-215ENST00000488920 CAPN1P07384 714 aa11.52□□□□□ -0.57
CCHCR1-215ENST00000488920 CTSBP07858 339 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms