RNA–Protein interactions for RNA: ENST00000488801.5

PTCD3-217, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-217ENST00000488801 PRKG2Q13237 762 aa18.1■□□□□ 0.49
PTCD3-217ENST00000488801 KLHL38Q2WGJ6 581 aa18.1■□□□□ 0.49
PTCD3-217ENST00000488801 TTLL9Q3SXZ7 439 aa18.1■□□□□ 0.49
PTCD3-217ENST00000488801 UBAP2Q5T6F2 1119 aaKnown RBP18.1■□□□□ 0.49
PTCD3-217ENST00000488801 FAM45BPQ6NSW5 357 aa18.1■□□□□ 0.49
PTCD3-217ENST00000488801 CEP128Q6ZU80 1094 aa18.1■□□□□ 0.49
PTCD3-217ENST00000488801 C3orf62Q6ZUJ4 267 aa18.1■□□□□ 0.49
PTCD3-217ENST00000488801 CLEC14AQ86T13 490 aa18.1■□□□□ 0.49
PTCD3-217ENST00000488801 CARFQ8N187 725 aa18.1■□□□□ 0.49
PTCD3-217ENST00000488801 KDF1Q8NAX2 398 aaPredicted RBP18.1■□□□□ 0.49
PTCD3-217ENST00000488801 FLVCR1-AS1Q8TAF5 88 aa18.1■□□□□ 0.49
PTCD3-217ENST00000488801 FAM45AQ8TCE6 357 aa18.1■□□□□ 0.49
PTCD3-217ENST00000488801 LCN9Q8WX39 176 aa18.1■□□□□ 0.49
PTCD3-217ENST00000488801 CD180Q99467 661 aa18.1■□□□□ 0.49
PTCD3-217ENST00000488801 OLFM1Q99784 485 aa18.1■□□□□ 0.49
PTCD3-217ENST00000488801 TSPYL1Q9H0U9 437 aa18.1■□□□□ 0.49
PTCD3-217ENST00000488801 RHOJQ9H4E5 214 aa18.1■□□□□ 0.49
PTCD3-217ENST00000488801 ZNF768Q9H5H4 540 aaKnown RBP18.1■□□□□ 0.49
PTCD3-217ENST00000488801 TAS2R13Q9NYV9 303 aa18.1■□□□□ 0.49
PTCD3-217ENST00000488801 NINJ2Q9NZG7 142 aa18.1■□□□□ 0.49
PTCD3-217ENST00000488801 RUVBL2Q9Y230 463 aaKnown RBP18.1■□□□□ 0.49
PTCD3-217ENST00000488801 TLCD2A6NGC4 264 aa18.09■□□□□ 0.49
PTCD3-217ENST00000488801 MATN2O00339 956 aa18.09■□□□□ 0.49
PTCD3-217ENST00000488801 BTN3A1O00481 513 aa18.09■□□□□ 0.49
PTCD3-217ENST00000488801 PIAS1O75925 651 aa18.09■□□□□ 0.49
PTCD3-217ENST00000488801 WISP3O95389 354 aaPredicted RBP18.09■□□□□ 0.49
PTCD3-217ENST00000488801 TSPAN12O95859 305 aa18.09■□□□□ 0.49
PTCD3-217ENST00000488801 ITGA2BP08514 1039 aa18.09■□□□□ 0.49
PTCD3-217ENST00000488801 ERGP11308 486 aa18.09■□□□□ 0.49
PTCD3-217ENST00000488801 HGFP14210 728 aa18.09■□□□□ 0.49
PTCD3-217ENST00000488801 STX2P32856 288 aa18.09■□□□□ 0.49
PTCD3-217ENST00000488801 SHMT2P34897 504 aa18.09■□□□□ 0.49
PTCD3-217ENST00000488801 ETV5P41161 510 aa18.09■□□□□ 0.49
PTCD3-217ENST00000488801 KPNA2P52292 529 aaKnown RBP18.09■□□□□ 0.49
PTCD3-217ENST00000488801 ILF2Q12905 390 aaKnown RBP18.09■□□□□ 0.49
PTCD3-217ENST00000488801 ABRQ12979 859 aa18.09■□□□□ 0.49
PTCD3-217ENST00000488801 KRT33BQ14525 404 aa18.09■□□□□ 0.49
PTCD3-217ENST00000488801 HECTD2Q5U5R9 776 aa18.09■□□□□ 0.49
PTCD3-217ENST00000488801 CYHR1Q6ZMK1 362 aa18.09■□□□□ 0.49
PTCD3-217ENST00000488801 STRA8Q7Z7C7 330 aa18.09■□□□□ 0.49
PTCD3-217ENST00000488801 AMIGO1Q86WK6 493 aa18.09■□□□□ 0.49
PTCD3-217ENST00000488801 CPNE9Q8IYJ1 553 aa18.09■□□□□ 0.49
PTCD3-217ENST00000488801 FBXO15Q8NCQ5 510 aaPredicted RBP18.09■□□□□ 0.49
PTCD3-217ENST00000488801 OR4E2Q8NGC2 313 aa18.09■□□□□ 0.49
PTCD3-217ENST00000488801 MDM1Q8TC05 714 aa18.09■□□□□ 0.49
PTCD3-217ENST00000488801 KLHL6Q8WZ60 621 aa18.09■□□□□ 0.49
PTCD3-217ENST00000488801 ZDHHC12Q96GR4 267 aa18.09■□□□□ 0.49
PTCD3-217ENST00000488801 VPS39Q96JC1 886 aa18.09■□□□□ 0.49
PTCD3-217ENST00000488801 SLC46A1Q96NT5 459 aa18.09■□□□□ 0.49
PTCD3-217ENST00000488801 TGM7Q96PF1 710 aa18.09■□□□□ 0.49
PTCD3-217ENST00000488801 CMKLR1Q99788 373 aa18.09■□□□□ 0.49
PTCD3-217ENST00000488801 CPNE1Q99829 537 aa18.09■□□□□ 0.49
PTCD3-217ENST00000488801 PITPNM3Q9BZ71 974 aa18.09■□□□□ 0.49
PTCD3-217ENST00000488801 B3GNT4Q9C0J1 378 aa18.09■□□□□ 0.49
PTCD3-217ENST00000488801 CDC42EP4Q9H3Q1 356 aaKnown RBP18.09■□□□□ 0.49
PTCD3-217ENST00000488801 SRMSQ9H3Y6 488 aa18.09■□□□□ 0.49
PTCD3-217ENST00000488801 HRASLS2Q9NWW9 162 aa18.09■□□□□ 0.49
PTCD3-217ENST00000488801 ZZEF1O43149 2961 aa18.09■□□□□ 0.49
PTCD3-217ENST00000488801 OR6C74A6NCV1 312 aa18.08■□□□□ 0.48
PTCD3-217ENST00000488801 ARHGEF33A8MVX0 844 aa18.08■□□□□ 0.48
PTCD3-217ENST00000488801 KIF1CO43896 1103 aaKnown RBP18.08■□□□□ 0.48
PTCD3-217ENST00000488801 RHOXF2BP0C7M4 288 aa18.08■□□□□ 0.48
PTCD3-217ENST00000488801 PEBP1P30086 187 aaKnown RBP18.08■□□□□ 0.48
PTCD3-217ENST00000488801 CCNFP41002 786 aa18.08■□□□□ 0.48
PTCD3-217ENST00000488801 SKIV2L2P42285 1042 aaKnown RBP18.08■□□□□ 0.48
PTCD3-217ENST00000488801 BDKRB1P46663 353 aa18.08■□□□□ 0.48
PTCD3-217ENST00000488801 RAB28P51157 221 aa18.08■□□□□ 0.48
PTCD3-217ENST00000488801 CYP4F3Q08477 520 aa18.08■□□□□ 0.48
PTCD3-217ENST00000488801 NAB1Q13506 487 aa18.08■□□□□ 0.48
PTCD3-217ENST00000488801 TBC1D25Q3MII6 688 aa18.08■□□□□ 0.48
PTCD3-217ENST00000488801 KBTBD12Q3ZCT8 623 aa18.08■□□□□ 0.48
PTCD3-217ENST00000488801 EEF1AKMT2Q5JPI9 291 aaKnown RBP18.08■□□□□ 0.48
PTCD3-217ENST00000488801 UGT3A1Q6NUS8 523 aa18.08■□□□□ 0.48
PTCD3-217ENST00000488801 IRGCQ6NXR0 463 aa18.08■□□□□ 0.48
PTCD3-217ENST00000488801 IFT20Q8IY31 132 aa18.08■□□□□ 0.48
PTCD3-217ENST00000488801 LSMEM2Q8N112 164 aa18.08■□□□□ 0.48
PTCD3-217ENST00000488801 FBXO39Q8N4B4 442 aa18.08■□□□□ 0.48
PTCD3-217ENST00000488801 LINC01555Q8NAE3 123 aa18.08■□□□□ 0.48
PTCD3-217ENST00000488801 AGBL5Q8NDL9 886 aa18.08■□□□□ 0.48
PTCD3-217ENST00000488801 DENND1AQ8TEH3 1009 aa18.08■□□□□ 0.48
PTCD3-217ENST00000488801 FBF1Q8TES7 1133 aa18.08■□□□□ 0.48
PTCD3-217ENST00000488801 IFT81Q8WYA0 676 aa18.08■□□□□ 0.48
PTCD3-217ENST00000488801 CDKL2Q92772 493 aa18.08■□□□□ 0.48
PTCD3-217ENST00000488801 SLC41A2Q96JW4 573 aa18.08■□□□□ 0.48
PTCD3-217ENST00000488801 CNTNAP3BQ96NU0 1288 aa18.08■□□□□ 0.48
PTCD3-217ENST00000488801 RBBP8Q99708 897 aa18.08■□□□□ 0.48
PTCD3-217ENST00000488801 RHOXF2Q9BQY4 288 aa18.08■□□□□ 0.48
PTCD3-217ENST00000488801 CNTNAP3Q9BZ76 1288 aa18.08■□□□□ 0.48
PTCD3-217ENST00000488801 ZMYND15Q9H091 742 aa18.08■□□□□ 0.48
PTCD3-217ENST00000488801 XKR8Q9H6D3 395 aa18.08■□□□□ 0.48
PTCD3-217ENST00000488801 OR6C2Q9NZP2 312 aa18.08■□□□□ 0.48
PTCD3-217ENST00000488801 TRMT6Q9UJA5 497 aaKnown RBP18.08■□□□□ 0.48
PTCD3-217ENST00000488801 ACSL6Q9UKU0 697 aa18.08■□□□□ 0.48
PTCD3-217ENST00000488801 FAM95CA0A1B0GW59 222 aa18.07■□□□□ 0.48
PTCD3-217ENST00000488801 B4E171 279 aa18.07■□□□□ 0.48
PTCD3-217ENST00000488801 GFYI3L273 518 aa18.07■□□□□ 0.48
PTCD3-217ENST00000488801 MYO1CO00159 1063 aa18.07■□□□□ 0.48
PTCD3-217ENST00000488801 FGF3P11487 239 aaPredicted RBP18.07■□□□□ 0.48
PTCD3-217ENST00000488801 ITIH1P19827 911 aa18.07■□□□□ 0.48
PTCD3-217ENST00000488801 TNFRSF8P28908 595 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms