RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 RNPEPL1Q9HAU8 725 aa18.94■□□□□ 0.62
CCM2-216ENST00000488727 TAS2R1Q9NYW7 299 aa18.94■□□□□ 0.62
CCM2-216ENST00000488727 BTBD3Q9Y2F9 522 aa18.94■□□□□ 0.62
CCM2-216ENST00000488727 PCDHGB2Q9Y5G2 931 aa18.94■□□□□ 0.62
CCM2-216ENST00000488727 CSNK1G3Q9Y6M4 447 aa18.94■□□□□ 0.62
CCM2-216ENST00000488727 IQCF5A8MTL0 148 aa18.93■□□□□ 0.62
CCM2-216ENST00000488727 LMO7DNF2Z398 122 aa18.93■□□□□ 0.62
CCM2-216ENST00000488727 TRIM13O60858 407 aa18.93■□□□□ 0.62
CCM2-216ENST00000488727 SLC35E2BP0CK96 405 aa18.93■□□□□ 0.62
CCM2-216ENST00000488727 PBLDP30039 288 aaPredicted RBP18.93■□□□□ 0.62
CCM2-216ENST00000488727 PLA2G5P39877 138 aa18.93■□□□□ 0.62
CCM2-216ENST00000488727 ADARP55265 1226 aaKnown RBP18.93■□□□□ 0.62
CCM2-216ENST00000488727 USP10Q14694 798 aaKnown RBP18.93■□□□□ 0.62
CCM2-216ENST00000488727 ZNF658BQ4V348 819 aaPredicted RBP18.93■□□□□ 0.62
CCM2-216ENST00000488727 SLC30A9Q6PML9 568 aa18.93■□□□□ 0.62
CCM2-216ENST00000488727 MAVSQ7Z434 540 aa18.93■□□□□ 0.62
CCM2-216ENST00000488727 TAF8Q7Z7C8 310 aa18.93■□□□□ 0.62
CCM2-216ENST00000488727 ARHGAP24Q8N264 748 aa18.93■□□□□ 0.62
CCM2-216ENST00000488727 TEX9Q8N6V9 391 aa18.93■□□□□ 0.62
CCM2-216ENST00000488727 ENDOVQ8N8Q3 282 aaKnown RBP18.93■□□□□ 0.62
CCM2-216ENST00000488727 FAM122AQ96E09 287 aa18.93■□□□□ 0.62
CCM2-216ENST00000488727 RILPQ96NA2 401 aa18.93■□□□□ 0.62
CCM2-216ENST00000488727 GSDMCQ9BYG8 508 aa18.93■□□□□ 0.62
CCM2-216ENST00000488727 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.93■□□□□ 0.62
CCM2-216ENST00000488727 OXSMQ9NWU1 459 aa18.93■□□□□ 0.62
CCM2-216ENST00000488727 DNMT3AQ9Y6K1 912 aaPredicted RBP18.93■□□□□ 0.62
CCM2-216ENST00000488727 CFAP54Q96N23 3096 aa18.92■□□□□ 0.62
CCM2-216ENST00000488727 PFDN6O15212 129 aa18.92■□□□□ 0.62
CCM2-216ENST00000488727 KLHL2O95198 593 aa18.92■□□□□ 0.62
CCM2-216ENST00000488727 CRABP2P29373 138 aa18.92■□□□□ 0.62
CCM2-216ENST00000488727 FMO4P31512 558 aa18.92■□□□□ 0.62
CCM2-216ENST00000488727 ACTR1BP42025 376 aa18.92■□□□□ 0.62
CCM2-216ENST00000488727 CD151P48509 253 aa18.92■□□□□ 0.62
CCM2-216ENST00000488727 HK2P52789 917 aa18.92■□□□□ 0.62
CCM2-216ENST00000488727 ACTR1AP61163 376 aa18.92■□□□□ 0.62
CCM2-216ENST00000488727 SLC14A1Q13336 389 aa18.92■□□□□ 0.62
CCM2-216ENST00000488727 ZNF549Q6P9A3 640 aa18.92■□□□□ 0.62
CCM2-216ENST00000488727 FAM83HQ6ZRV2 1179 aaPredicted RBP18.92■□□□□ 0.62
CCM2-216ENST00000488727 RAPH1Q70E73 1250 aa18.92■□□□□ 0.62
CCM2-216ENST00000488727 GALNT7Q86SF2 657 aa18.92■□□□□ 0.62
CCM2-216ENST00000488727 AMZ2Q86W34 360 aa18.92■□□□□ 0.62
CCM2-216ENST00000488727 GABPB2Q8TAK5 448 aaPredicted RBP18.92■□□□□ 0.62
CCM2-216ENST00000488727 STON2Q8WXE9 905 aa18.92■□□□□ 0.62
CCM2-216ENST00000488727 SPATS2LQ9NUQ6 558 aaKnown RBP18.92■□□□□ 0.62
CCM2-216ENST00000488727 PNPOQ9NVS9 261 aa18.92■□□□□ 0.62
CCM2-216ENST00000488727 FAM8A1Q9UBU6 413 aa18.92■□□□□ 0.62
CCM2-216ENST00000488727 APOBEC2Q9Y235 224 aaKnown RBP18.92■□□□□ 0.62
CCM2-216ENST00000488727 VPS9D1Q9Y2B5 631 aa18.92■□□□□ 0.62
CCM2-216ENST00000488727 FAM95CA0A1B0GW59 222 aa18.91■□□□□ 0.62
CCM2-216ENST00000488727 MGAT4DA6NG13 374 aa18.91■□□□□ 0.62
CCM2-216ENST00000488727 QSOX1O00391 747 aa18.91■□□□□ 0.62
CCM2-216ENST00000488727 OR56A5P0C7T3 313 aa18.91■□□□□ 0.62
CCM2-216ENST00000488727 IDH3AP50213 366 aa18.91■□□□□ 0.62
CCM2-216ENST00000488727 RAB10P61026 200 aa18.91■□□□□ 0.62
CCM2-216ENST00000488727 ARHGAP8P85298 464 aa18.91■□□□□ 0.62
CCM2-216ENST00000488727 NFE2L1Q14494 772 aa18.91■□□□□ 0.62
CCM2-216ENST00000488727 GKN2Q86XP6 184 aa18.91■□□□□ 0.62
CCM2-216ENST00000488727 SFTPA2Q8IWL1 248 aa18.91■□□□□ 0.62
CCM2-216ENST00000488727 TMEM151AQ8N4L1 468 aa18.91■□□□□ 0.62
CCM2-216ENST00000488727 LILRA3Q8N6C8 439 aaPredicted RBP18.91■□□□□ 0.62
CCM2-216ENST00000488727 OR2L2Q8NH16 312 aa18.91■□□□□ 0.62
CCM2-216ENST00000488727 CCM2Q9BSQ5 444 aa18.91■□□□□ 0.62
CCM2-216ENST00000488727 C1orf21Q9H246 121 aa18.91■□□□□ 0.62
CCM2-216ENST00000488727 DENND2DQ9H6A0 471 aaPredicted RBP18.91■□□□□ 0.62
CCM2-216ENST00000488727 TAAR2Q9P1P5 351 aa18.91■□□□□ 0.62
CCM2-216ENST00000488727 GNPTGQ9UJJ9 305 aa18.91■□□□□ 0.62
CCM2-216ENST00000488727 L3MBTL1Q9Y468 752 aa18.91■□□□□ 0.62
CCM2-216ENST00000488727 NEMP2A6NFY4 417 aa18.91■□□□□ 0.62
CCM2-216ENST00000488727 TARM1B6A8C7 271 aa18.91■□□□□ 0.62
CCM2-216ENST00000488727 TRIM38O00635 465 aa18.91■□□□□ 0.62
CCM2-216ENST00000488727 EML2O95834 649 aa18.91■□□□□ 0.62
CCM2-216ENST00000488727 ESR1P03372 595 aa18.91■□□□□ 0.62
CCM2-216ENST00000488727 ENO1P06733 434 aaKnown RBP18.91■□□□□ 0.62
CCM2-216ENST00000488727 ANXA6P08133 673 aa18.91■□□□□ 0.62
CCM2-216ENST00000488727 ITGB6P18564 788 aa18.91■□□□□ 0.62
CCM2-216ENST00000488727 CLCNKAP51800 687 aa18.91■□□□□ 0.62
CCM2-216ENST00000488727 CCNG1P51959 295 aa18.91■□□□□ 0.62
CCM2-216ENST00000488727 LIMK1P53667 647 aa18.91■□□□□ 0.62
CCM2-216ENST00000488727 ALDH18A1P54886 795 aaKnown RBP18.91■□□□□ 0.62
CCM2-216ENST00000488727 DMPKQ09013 629 aa18.91■□□□□ 0.62
CCM2-216ENST00000488727 TSNAXIP1Q2TAA8 658 aa18.91■□□□□ 0.62
CCM2-216ENST00000488727 LIPMQ5VYY2 423 aa18.91■□□□□ 0.62
CCM2-216ENST00000488727 PTRHD1Q6GMV3 140 aaKnown RBP18.91■□□□□ 0.62
CCM2-216ENST00000488727 NAPRTQ6XQN6 538 aa18.91■□□□□ 0.62
CCM2-216ENST00000488727 CENPLQ8N0S6 344 aaPredicted RBP18.91■□□□□ 0.62
CCM2-216ENST00000488727 SDR16C5Q8N3Y7 309 aa18.91■□□□□ 0.62
CCM2-216ENST00000488727 OR4C6Q8NH72 309 aa18.91■□□□□ 0.62
CCM2-216ENST00000488727 MCUR1Q96AQ8 359 aa18.91■□□□□ 0.62
CCM2-216ENST00000488727 TACO1Q9BSH4 297 aaKnown RBP18.91■□□□□ 0.62
CCM2-216ENST00000488727 OSGEPL1Q9H4B0 414 aa18.91■□□□□ 0.62
CCM2-216ENST00000488727 NLGN3Q9NZ94 848 aa18.91■□□□□ 0.62
CCM2-216ENST00000488727 TBC1D29Q9UFV1 150 aa18.91■□□□□ 0.62
CCM2-216ENST00000488727 DOLKQ9UPQ8 538 aa18.91■□□□□ 0.62
CCM2-216ENST00000488727 ACOT9Q9Y305 439 aa18.91■□□□□ 0.62
CCM2-216ENST00000488727 PCDHB1Q9Y5F3 818 aa18.91■□□□□ 0.62
CCM2-216ENST00000488727 A0A087X1B8 175 aa18.9■□□□□ 0.62
CCM2-216ENST00000488727 PHGDHO43175 533 aaKnown RBP18.9■□□□□ 0.62
CCM2-216ENST00000488727 NIPSNAP2O75323 286 aa18.9■□□□□ 0.62
CCM2-216ENST00000488727 HSPA4LO95757 839 aa18.9■□□□□ 0.62
CCM2-216ENST00000488727 FTH1P02794 183 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms