RNA–Protein interactions for RNA: ENST00000487539.1

CNN3-206, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 739 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-206ENST00000487539 ABI3BPQ7Z7G0 1075 aa4.36□□□□□ -1.71
CNN3-206ENST00000487539 TRIM69Q86WT6 500 aa4.36□□□□□ -1.71
CNN3-206ENST00000487539 RBMXL3Q8N7X1 1067 aaKnown RBP4.36□□□□□ -1.71
CNN3-206ENST00000487539 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.36□□□□□ -1.71
CNN3-206ENST00000487539 NDRG1Q92597 394 aaKnown RBP4.36□□□□□ -1.71
CNN3-206ENST00000487539 ART4Q93070 314 aa4.36□□□□□ -1.71
CNN3-206ENST00000487539 FAM131CQ96AQ9 280 aa4.36□□□□□ -1.71
CNN3-206ENST00000487539 SNX22Q96L94 193 aa4.36□□□□□ -1.71
CNN3-206ENST00000487539 ZNF560Q96MR9 790 aa4.36□□□□□ -1.71
CNN3-206ENST00000487539 SNX18Q96RF0 628 aa4.36□□□□□ -1.71
CNN3-206ENST00000487539 PRR25Q96S07 402 aa4.36□□□□□ -1.71
CNN3-206ENST00000487539 CTRCQ99895 268 aa4.36□□□□□ -1.71
CNN3-206ENST00000487539 LRRC61Q9BV99 259 aa4.36□□□□□ -1.71
CNN3-206ENST00000487539 SLC2A11Q9BYW1 496 aa4.36□□□□□ -1.71
CNN3-206ENST00000487539 RDH14Q9HBH5 336 aa4.36□□□□□ -1.71
CNN3-206ENST00000487539 SNX15Q9NRS6 342 aa4.36□□□□□ -1.71
CNN3-206ENST00000487539 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.36□□□□□ -1.71
CNN3-206ENST00000487539 EHD2Q9NZN4 543 aa4.36□□□□□ -1.71
CNN3-206ENST00000487539 RCOR3Q9P2K3 495 aaPredicted RBP4.36□□□□□ -1.71
CNN3-206ENST00000487539 ZNF212Q9UDV6 495 aa4.36□□□□□ -1.71
CNN3-206ENST00000487539 PHTF1Q9UMS5 762 aa4.36□□□□□ -1.71
CNN3-206ENST00000487539 SCML1Q9UN30 329 aa4.36□□□□□ -1.71
CNN3-206ENST00000487539 CSNK1G3Q9Y6M4 447 aa4.36□□□□□ -1.71
CNN3-206ENST00000487539 NYNRINQ9P2P1 1898 aaKnown RBP4.36□□□□□ -1.71
CNN3-206ENST00000487539 CNTRLQ7Z7A1 2325 aa4.35□□□□□ -1.71
CNN3-206ENST00000487539 FLNAP21333 2647 aaKnown RBP4.35□□□□□ -1.71
CNN3-206ENST00000487539 CUBNO60494 3623 aa4.35□□□□□ -1.71
CNN3-206ENST00000487539 SPTY2D1-AS1A0A0U1RR47 76 aa4.35□□□□□ -1.71
CNN3-206ENST00000487539 HEATR9A2RTY3 570 aa4.35□□□□□ -1.71
CNN3-206ENST00000487539 GOLGA8IPA6NC78 632 aa4.35□□□□□ -1.71
CNN3-206ENST00000487539 ZSCAN5CA6NGD5 496 aaPredicted RBP4.35□□□□□ -1.71
CNN3-206ENST00000487539 GOLGA8JA6NMD2 632 aa4.35□□□□□ -1.71
CNN3-206ENST00000487539 HHLA1C9JL84 531 aa4.35□□□□□ -1.71
CNN3-206ENST00000487539 POC1B-GALNT4F8VUJ3 575 aa4.35□□□□□ -1.71
CNN3-206ENST00000487539 TMX2-CTNND1H3BSU7 103 aa4.35□□□□□ -1.71
CNN3-206ENST00000487539 CES2O00748 559 aa4.35□□□□□ -1.71
CNN3-206ENST00000487539 HNRNPDLO14979 420 aaKnown RBP4.35□□□□□ -1.71
CNN3-206ENST00000487539 THAP12O43422 761 aa4.35□□□□□ -1.71
CNN3-206ENST00000487539 B4GAT1O43505 415 aa4.35□□□□□ -1.71
CNN3-206ENST00000487539 NEMFO60524 1076 aa4.35□□□□□ -1.71
CNN3-206ENST00000487539 EXOC3O60645 756 aa4.35□□□□□ -1.71
CNN3-206ENST00000487539 SNX2O60749 519 aa4.35□□□□□ -1.71
CNN3-206ENST00000487539 RNASEH1O60930 286 aaKnown RBP4.35□□□□□ -1.71
CNN3-206ENST00000487539 IL18RAPO95256 599 aa4.35□□□□□ -1.71
CNN3-206ENST00000487539 DEXIO95424 95 aa4.35□□□□□ -1.71
CNN3-206ENST00000487539 PIGRP01833 764 aa4.35□□□□□ -1.71
CNN3-206ENST00000487539 COX6B1P14854 86 aa4.35□□□□□ -1.71
CNN3-206ENST00000487539 CD1EP15812 388 aa4.35□□□□□ -1.71
CNN3-206ENST00000487539 POLR2EP19388 210 aaKnown RBP4.35□□□□□ -1.71
CNN3-206ENST00000487539 BTF3P20290 206 aaKnown RBP4.35□□□□□ -1.71
CNN3-206ENST00000487539 ITGA3P26006 1051 aa4.35□□□□□ -1.71
CNN3-206ENST00000487539 GNL1P36915 607 aaPredicted RBP4.35□□□□□ -1.71
CNN3-206ENST00000487539 CSKP41240 450 aa4.35□□□□□ -1.71
CNN3-206ENST00000487539 PNPLA4P41247 253 aa4.35□□□□□ -1.71
CNN3-206ENST00000487539 TIRAPP58753 221 aa4.35□□□□□ -1.71
CNN3-206ENST00000487539 CDK18Q07002 472 aa4.35□□□□□ -1.71
CNN3-206ENST00000487539 FOXF2Q12947 444 aa4.35□□□□□ -1.71
CNN3-206ENST00000487539 FOXD4Q12950 439 aaPredicted RBP4.35□□□□□ -1.71
CNN3-206ENST00000487539 STK3Q13188 491 aa4.35□□□□□ -1.71
CNN3-206ENST00000487539 DAG1Q14118 895 aa4.35□□□□□ -1.71
CNN3-206ENST00000487539 C14orf28Q4W4Y0 310 aa4.35□□□□□ -1.71
CNN3-206ENST00000487539 SETMARQ53H47 684 aaPredicted RBP4.35□□□□□ -1.71
CNN3-206ENST00000487539 FSCBQ5H9T9 825 aa4.35□□□□□ -1.71
CNN3-206ENST00000487539 ADALQ6DHV7 355 aa4.35□□□□□ -1.71
CNN3-206ENST00000487539 PLAG1Q6DJT9 500 aa4.35□□□□□ -1.71
CNN3-206ENST00000487539 GALNT17Q6IS24 598 aa4.35□□□□□ -1.71
CNN3-206ENST00000487539 RFWD3Q6PCD5 774 aa4.35□□□□□ -1.71
CNN3-206ENST00000487539 DPY19L3Q6ZPD9 716 aa4.35□□□□□ -1.71
CNN3-206ENST00000487539 PTCHD4Q6ZW05 846 aa4.35□□□□□ -1.71
CNN3-206ENST00000487539 SFR1Q86XK3 245 aa4.35□□□□□ -1.71
CNN3-206ENST00000487539 TGIF2LYQ8IUE0 185 aa4.35□□□□□ -1.71
CNN3-206ENST00000487539 CCDC83Q8IWF9 413 aa4.35□□□□□ -1.71
CNN3-206ENST00000487539 FAM217AQ8IXS0 508 aa4.35□□□□□ -1.71
CNN3-206ENST00000487539 GALNT4Q8N4A0 578 aa4.35□□□□□ -1.71
CNN3-206ENST00000487539 OR5B17Q8NGF7 314 aa4.35□□□□□ -1.71
CNN3-206ENST00000487539 WFIKKN2Q8TEU8 576 aa4.35□□□□□ -1.71
CNN3-206ENST00000487539 DPF1Q92782 380 aa4.35□□□□□ -1.71
CNN3-206ENST00000487539 NAT6Q93015 286 aa4.35□□□□□ -1.71
CNN3-206ENST00000487539 JAKMIP2Q96AA8 810 aa4.35□□□□□ -1.71
CNN3-206ENST00000487539 IQCDQ96DY2 449 aa4.35□□□□□ -1.71
CNN3-206ENST00000487539 SAAL1Q96ER3 474 aa4.35□□□□□ -1.71
CNN3-206ENST00000487539 LENG8Q96PV6 779 aaPredicted RBP4.35□□□□□ -1.71
CNN3-206ENST00000487539 FYTTD1Q96QD9 318 aaKnown RBP4.35□□□□□ -1.71
CNN3-206ENST00000487539 PLIN2Q99541 437 aa4.35□□□□□ -1.71
CNN3-206ENST00000487539 CMKLR1Q99788 373 aa4.35□□□□□ -1.71
CNN3-206ENST00000487539 NUDT22Q9BRQ3 303 aa4.35□□□□□ -1.71
CNN3-206ENST00000487539 MTMR12Q9C0I1 747 aa4.35□□□□□ -1.71
CNN3-206ENST00000487539 PDE11AQ9HCR9 933 aa4.35□□□□□ -1.71
CNN3-206ENST00000487539 COPG2Q9UBF2 871 aa4.35□□□□□ -1.71
CNN3-206ENST00000487539 NKX1-2Q9UD57 310 aaPredicted RBP4.35□□□□□ -1.71
CNN3-206ENST00000487539 RASAL2Q9UJF2 1139 aa4.35□□□□□ -1.71
CNN3-206ENST00000487539 AGO2Q9UKV8 859 aaKnown RBP4.35□□□□□ -1.71
CNN3-206ENST00000487539 CAPN11Q9UMQ6 739 aa4.35□□□□□ -1.71
CNN3-206ENST00000487539 ERVW-1Q9UQF0 538 aa4.35□□□□□ -1.71
CNN3-206ENST00000487539 OSGIN2Q9Y236 505 aa4.35□□□□□ -1.71
CNN3-206ENST00000487539 IGHV5-10-1A0A0J9YXX1 117 aa4.34□□□□□ -1.71
CNN3-206ENST00000487539 LMO7DNF2Z398 122 aa4.34□□□□□ -1.71
CNN3-206ENST00000487539 KCNAB3O43448 404 aa4.34□□□□□ -1.71
CNN3-206ENST00000487539 TMPRSS11DO60235 418 aa4.34□□□□□ -1.71
CNN3-206ENST00000487539 USP1O94782 785 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms