RNA–Protein interactions for RNA: ENST00000487354.1

MCF2L-228, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-228ENST00000487354 MPP3Q13368 585 aa14.79□□□□□ -0.04
MCF2L-228ENST00000487354 KRT33BQ14525 404 aa14.79□□□□□ -0.04
MCF2L-228ENST00000487354 ZNF169Q14929 603 aaPredicted RBP14.79□□□□□ -0.04
MCF2L-228ENST00000487354 TAF1AQ15573 450 aaPredicted RBP14.79□□□□□ -0.04
MCF2L-228ENST00000487354 CYP2A13Q16696 494 aa14.79□□□□□ -0.04
MCF2L-228ENST00000487354 PRAMEF13Q5VWM6 474 aa14.79□□□□□ -0.04
MCF2L-228ENST00000487354 B3GNTL1Q67FW5 361 aaPredicted RBP14.79□□□□□ -0.04
MCF2L-228ENST00000487354 SARM1Q6SZW1 724 aa14.79□□□□□ -0.04
MCF2L-228ENST00000487354 COX15Q7KZN9 410 aa14.79□□□□□ -0.04
MCF2L-228ENST00000487354 NXPE1Q8N323 547 aa14.79□□□□□ -0.04
MCF2L-228ENST00000487354 DNAJC22Q8N4W6 341 aa14.79□□□□□ -0.04
MCF2L-228ENST00000487354 OR13C4Q8NGS5 318 aa14.79□□□□□ -0.04
MCF2L-228ENST00000487354 TFB1MQ8WVM0 346 aaKnown RBP14.79□□□□□ -0.04
MCF2L-228ENST00000487354 CTNNBL1Q8WYA6 563 aaPredicted RBP14.79□□□□□ -0.04
MCF2L-228ENST00000487354 PCNX1Q96RV3 2341 aa14.79□□□□□ -0.04
MCF2L-228ENST00000487354 SPSB2Q99619 263 aa14.79□□□□□ -0.04
MCF2L-228ENST00000487354 TRIM56Q9BRZ2 755 aaKnown RBP14.79□□□□□ -0.04
MCF2L-228ENST00000487354 AP1M1Q9BXS5 423 aa14.79□□□□□ -0.04
MCF2L-228ENST00000487354 FAM96AQ9H5X1 160 aa14.79□□□□□ -0.04
MCF2L-228ENST00000487354 MVB12BQ9H7P6 319 aa14.79□□□□□ -0.04
MCF2L-228ENST00000487354 NDOR1Q9UHB4 597 aa14.79□□□□□ -0.04
MCF2L-228ENST00000487354 GPN3Q9UHW5 284 aaPredicted RBP14.79□□□□□ -0.04
MCF2L-228ENST00000487354 LCMT1Q9UIC8 334 aa14.79□□□□□ -0.04
MCF2L-228ENST00000487354 HS3ST3B1Q9Y662 390 aa14.79□□□□□ -0.04
MCF2L-228ENST00000487354 TMEM253P0C7T8 217 aa14.78□□□□□ -0.04
MCF2L-228ENST00000487354 MMP11P24347 488 aa14.78□□□□□ -0.04
MCF2L-228ENST00000487354 ADRA1AP35348 466 aa14.78□□□□□ -0.04
MCF2L-228ENST00000487354 CD151P48509 253 aa14.78□□□□□ -0.04
MCF2L-228ENST00000487354 CDKN1CP49918 316 aaPredicted RBP14.78□□□□□ -0.04
MCF2L-228ENST00000487354 ZNF140P52738 457 aaPredicted RBP14.78□□□□□ -0.04
MCF2L-228ENST00000487354 LRRC38Q5VT99 294 aa14.78□□□□□ -0.04
MCF2L-228ENST00000487354 KIRREL2Q6UWL6 708 aa14.78□□□□□ -0.04
MCF2L-228ENST00000487354 UNC5AQ6ZN44 842 aa14.78□□□□□ -0.04
MCF2L-228ENST00000487354 DNAJB14Q8TBM8 379 aa14.78□□□□□ -0.04
MCF2L-228ENST00000487354 CPLX3Q8WVH0 158 aa14.78□□□□□ -0.04
MCF2L-228ENST00000487354 ITLN2Q8WWU7 325 aaPredicted RBP14.78□□□□□ -0.04
MCF2L-228ENST00000487354 RELTQ969Z4 430 aa14.78□□□□□ -0.04
MCF2L-228ENST00000487354 FICDQ9BVA6 458 aa14.78□□□□□ -0.04
MCF2L-228ENST00000487354 MAK16Q9BXY0 300 aaKnown RBP14.78□□□□□ -0.04
MCF2L-228ENST00000487354 KLHL8Q9P2G9 620 aaPredicted RBP14.78□□□□□ -0.04
MCF2L-228ENST00000487354 ITPR3Q14573 2671 aa14.78□□□□□ -0.04
MCF2L-228ENST00000487354 CACNA1CQ13936 2221 aa14.77□□□□□ -0.04
MCF2L-228ENST00000487354 SMTNL1A8MU46 457 aa14.77□□□□□ -0.05
MCF2L-228ENST00000487354 CCL22O00626 93 aa14.77□□□□□ -0.05
MCF2L-228ENST00000487354 ONECUT2O95948 504 aa14.77□□□□□ -0.05
MCF2L-228ENST00000487354 PRSS56P0CW18 603 aa14.77□□□□□ -0.05
MCF2L-228ENST00000487354 ATP1B2P14415 290 aaPredicted RBP14.77□□□□□ -0.05
MCF2L-228ENST00000487354 NR2C2P49116 596 aa14.77□□□□□ -0.05
MCF2L-228ENST00000487354 OTUD4Q01804 1114 aaKnown RBP14.77□□□□□ -0.05
MCF2L-228ENST00000487354 CDC16Q13042 620 aa14.77□□□□□ -0.05
MCF2L-228ENST00000487354 NAA30Q147X3 362 aaPredicted RBP14.77□□□□□ -0.05
MCF2L-228ENST00000487354 SLC18A3Q16572 532 aa14.77□□□□□ -0.05
MCF2L-228ENST00000487354 RANBP10Q6VN20 620 aa14.77□□□□□ -0.05
MCF2L-228ENST00000487354 OR5AR1Q8NGP9 310 aa14.77□□□□□ -0.05
MCF2L-228ENST00000487354 SLC35G2Q8TBE7 412 aa14.77□□□□□ -0.05
MCF2L-228ENST00000487354 TFGQ92734 400 aaPredicted RBP14.77□□□□□ -0.05
MCF2L-228ENST00000487354 LURAP1Q96LR2 239 aa14.77□□□□□ -0.05
MCF2L-228ENST00000487354 QKIQ96PU8 341 aaKnown RBP eCLIP14.77□□□□□ -0.05
MCF2L-228ENST00000487354 NAT10Q9H0A0 1025 aaKnown RBP14.77□□□□□ -0.05
MCF2L-228ENST00000487354 COPG2Q9UBF2 871 aa14.77□□□□□ -0.05
MCF2L-228ENST00000487354 CRLS1Q9UJA2 301 aa14.77□□□□□ -0.05
MCF2L-228ENST00000487354 HYOU1Q9Y4L1 999 aa14.77□□□□□ -0.05
MCF2L-228ENST00000487354 MTORP42345 2549 aa14.77□□□□□ -0.05
MCF2L-228ENST00000487354 TRBV5-4A0A0C4DH59 114 aa14.76□□□□□ -0.05
MCF2L-228ENST00000487354 A0A0J9YY10 115 aa14.76□□□□□ -0.05
MCF2L-228ENST00000487354 HEATR9A2RTY3 570 aa14.76□□□□□ -0.05
MCF2L-228ENST00000487354 PCDH17O14917 1159 aa14.76□□□□□ -0.05
MCF2L-228ENST00000487354 MAP3K7O43318 606 aa14.76□□□□□ -0.05
MCF2L-228ENST00000487354 CST8O60676 142 aa14.76□□□□□ -0.05
MCF2L-228ENST00000487354 SERPINC1P01008 464 aa14.76□□□□□ -0.05
MCF2L-228ENST00000487354 CHRM5P08912 532 aaPredicted RBP14.76□□□□□ -0.05
MCF2L-228ENST00000487354 CD63P08962 238 aa14.76□□□□□ -0.05
MCF2L-228ENST00000487354 ACADLP28330 430 aa14.76□□□□□ -0.05
MCF2L-228ENST00000487354 KCNK10P57789 538 aa14.76□□□□□ -0.05
MCF2L-228ENST00000487354 ART3Q13508 389 aa14.76□□□□□ -0.05
MCF2L-228ENST00000487354 NKG7Q16617 165 aa14.76□□□□□ -0.05
MCF2L-228ENST00000487354 AGAP7PQ5VUJ5 663 aa14.76□□□□□ -0.05
MCF2L-228ENST00000487354 TLDC1Q6P9B6 456 aa14.76□□□□□ -0.05
MCF2L-228ENST00000487354 PID1Q7Z2X4 250 aa14.76□□□□□ -0.05
MCF2L-228ENST00000487354 ZC3H18Q86VM9 953 aaKnown RBP14.76□□□□□ -0.05
MCF2L-228ENST00000487354 FAM20CQ8IXL6 584 aa14.76□□□□□ -0.05
MCF2L-228ENST00000487354 CATSPER1Q8NEC5 780 aa14.76□□□□□ -0.05
MCF2L-228ENST00000487354 COG1Q8WTW3 980 aa14.76□□□□□ -0.05
MCF2L-228ENST00000487354 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.76□□□□□ -0.05
MCF2L-228ENST00000487354 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.76□□□□□ -0.05
MCF2L-228ENST00000487354 FKBP10Q96AY3 582 aa14.76□□□□□ -0.05
MCF2L-228ENST00000487354 NACC2Q96BF6 587 aa14.76□□□□□ -0.05
MCF2L-228ENST00000487354 CNDP1Q96KN2 507 aa14.76□□□□□ -0.05
MCF2L-228ENST00000487354 AGAP4Q96P64 663 aa14.76□□□□□ -0.05
MCF2L-228ENST00000487354 TAAR6Q96RI8 345 aa14.76□□□□□ -0.05
MCF2L-228ENST00000487354 COPS8Q99627 209 aa14.76□□□□□ -0.05
MCF2L-228ENST00000487354 APOL2Q9BQE5 337 aa14.76□□□□□ -0.05
MCF2L-228ENST00000487354 GBA3Q9H227 469 aa14.76□□□□□ -0.05
MCF2L-228ENST00000487354 KLF2Q9Y5W3 355 aaPredicted RBP14.76□□□□□ -0.05
MCF2L-228ENST00000487354 A0A1B0GUH1 482 aa14.75□□□□□ -0.05
MCF2L-228ENST00000487354 IFRD1O00458 451 aaPredicted RBP14.75□□□□□ -0.05
MCF2L-228ENST00000487354 KLHL18O94889 574 aa14.75□□□□□ -0.05
MCF2L-228ENST00000487354 FANCCQ00597 558 aa14.75□□□□□ -0.05
MCF2L-228ENST00000487354 RPA4Q13156 261 aa14.75□□□□□ -0.05
MCF2L-228ENST00000487354 TLR1Q15399 786 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms