RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 TSPAN33Q86UF1 283 aa25.55■■□□□ 1.68
HLA-C-208ENST00000487245 DRAXINQ8NBI3 349 aaPredicted RBP25.55■■□□□ 1.68
HLA-C-208ENST00000487245 GPR26Q8NDV2 337 aa25.55■■□□□ 1.68
HLA-C-208ENST00000487245 ITFG1Q8TB96 612 aa25.55■■□□□ 1.68
HLA-C-208ENST00000487245 FAM81AQ8TBF8 368 aa25.55■■□□□ 1.68
HLA-C-208ENST00000487245 SLC13A3Q8WWT9 602 aa25.55■■□□□ 1.68
HLA-C-208ENST00000487245 LZICQ8WZA0 190 aa25.55■■□□□ 1.68
HLA-C-208ENST00000487245 MCCC1Q96RQ3 725 aaPredicted RBP25.55■■□□□ 1.68
HLA-C-208ENST00000487245 APOL5Q9BWW9 433 aa25.55■■□□□ 1.68
HLA-C-208ENST00000487245 SLC25A13Q9UJS0 675 aa25.55■■□□□ 1.68
HLA-C-208ENST00000487245 A0A1W2PRU2 124 aa25.55■■□□□ 1.68
HLA-C-208ENST00000487245 H0Y858 1186 aa25.55■■□□□ 1.68
HLA-C-208ENST00000487245 C8AP07357 584 aa25.55■■□□□ 1.68
HLA-C-208ENST00000487245 DCKP27707 260 aa25.55■■□□□ 1.68
HLA-C-208ENST00000487245 DGKQP52824 942 aa25.55■■□□□ 1.68
HLA-C-208ENST00000487245 MTPNP58546 118 aa25.55■■□□□ 1.68
HLA-C-208ENST00000487245 COPS8Q99627 209 aa25.55■■□□□ 1.68
HLA-C-208ENST00000487245 SLC46A2Q9BY10 475 aa25.55■■□□□ 1.68
HLA-C-208ENST00000487245 UGT2B28Q9BY64 529 aa25.55■■□□□ 1.68
HLA-C-208ENST00000487245 ASAH2Q9NR71 780 aa25.55■■□□□ 1.68
HLA-C-208ENST00000487245 TLR9Q9NR96 1032 aa25.55■■□□□ 1.68
HLA-C-208ENST00000487245 TRIM64BA6NI03 449 aa25.54■■□□□ 1.68
HLA-C-208ENST00000487245 SEC24DO94855 1032 aaPredicted RBP25.54■■□□□ 1.68
HLA-C-208ENST00000487245 ALBP02768 609 aa25.54■■□□□ 1.68
HLA-C-208ENST00000487245 ADH1AP07327 375 aa25.54■■□□□ 1.68
HLA-C-208ENST00000487245 AKT1P31749 480 aa25.54■■□□□ 1.68
HLA-C-208ENST00000487245 ARSFP54793 590 aa25.54■■□□□ 1.68
HLA-C-208ENST00000487245 CHRNB3Q05901 458 aa25.54■■□□□ 1.68
HLA-C-208ENST00000487245 CBX2Q14781 532 aaPredicted RBP25.54■■□□□ 1.68
HLA-C-208ENST00000487245 PHKG1Q16816 387 aa25.54■■□□□ 1.68
HLA-C-208ENST00000487245 CARD16Q5EG05 197 aa25.54■■□□□ 1.68
HLA-C-208ENST00000487245 CMTM8Q8IZV2 173 aa25.54■■□□□ 1.68
HLA-C-208ENST00000487245 ZNF557Q8N988 423 aaPredicted RBP25.54■■□□□ 1.68
HLA-C-208ENST00000487245 EMILIN2Q9BXX0 1053 aa25.54■■□□□ 1.68
HLA-C-208ENST00000487245 SLC29A3Q9BZD2 475 aa25.54■■□□□ 1.68
HLA-C-208ENST00000487245 ZMYM5Q9UJ78 669 aa25.54■■□□□ 1.68
HLA-C-208ENST00000487245 GMNNO75496 209 aa25.53■■□□□ 1.68
HLA-C-208ENST00000487245 ANXA5P08758 320 aa25.53■■□□□ 1.68
HLA-C-208ENST00000487245 SLC2A4P14672 509 aa25.53■■□□□ 1.68
HLA-C-208ENST00000487245 EPB42P16452 691 aa25.53■■□□□ 1.68
HLA-C-208ENST00000487245 LRRC66Q68CR7 880 aa25.53■■□□□ 1.68
HLA-C-208ENST00000487245 OFCC1Q8IZS5 231 aa25.53■■□□□ 1.68
HLA-C-208ENST00000487245 KREMEN2Q8NCW0 462 aa25.53■■□□□ 1.68
HLA-C-208ENST00000487245 GTF2H4Q92759 462 aa25.53■■□□□ 1.68
HLA-C-208ENST00000487245 C12orf43Q96C57 262 aaKnown RBP25.53■■□□□ 1.68
HLA-C-208ENST00000487245 SH3GL1Q99961 368 aa25.53■■□□□ 1.68
HLA-C-208ENST00000487245 CXorf21Q9HAI6 301 aa25.53■■□□□ 1.68
HLA-C-208ENST00000487245 CXCL14O95715 111 aa25.53■■□□□ 1.68
HLA-C-208ENST00000487245 CLIC3O95833 236 aa25.53■■□□□ 1.68
HLA-C-208ENST00000487245 IL6P05231 212 aa25.53■■□□□ 1.68
HLA-C-208ENST00000487245 OR56A5P0C7T3 313 aa25.53■■□□□ 1.68
HLA-C-208ENST00000487245 CTSOP43234 321 aaPredicted RBP25.53■■□□□ 1.68
HLA-C-208ENST00000487245 CTBSQ01459 385 aa25.53■■□□□ 1.68
HLA-C-208ENST00000487245 DNAJB8Q8NHS0 232 aa25.53■■□□□ 1.68
HLA-C-208ENST00000487245 POP5Q969H6 163 aaKnown RBP25.53■■□□□ 1.68
HLA-C-208ENST00000487245 TMBIM1Q969X1 311 aa25.53■■□□□ 1.68
HLA-C-208ENST00000487245 PIF1Q9H611 641 aa25.53■■□□□ 1.68
HLA-C-208ENST00000487245 LIN28AQ9H9Z2 209 aaKnown RBP25.53■■□□□ 1.68
HLA-C-208ENST00000487245 EBF1Q9UH73 591 aa25.53■■□□□ 1.68
HLA-C-208ENST00000487245 A8MX80 341 aa25.52■■□□□ 1.68
HLA-C-208ENST00000487245 ULK1O75385 1050 aa25.52■■□□□ 1.68
HLA-C-208ENST00000487245 STK16O75716 305 aa25.52■■□□□ 1.68
HLA-C-208ENST00000487245 ALPLP05186 524 aa25.52■■□□□ 1.68
HLA-C-208ENST00000487245 JUNBP17275 347 aaPredicted RBP25.52■■□□□ 1.68
HLA-C-208ENST00000487245 STK19P49842 368 aaPredicted RBP25.52■■□□□ 1.68
HLA-C-208ENST00000487245 RPL38P63173 70 aaKnown RBP25.52■■□□□ 1.68
HLA-C-208ENST00000487245 GRSF1Q12849 480 aaKnown RBP eCLIP25.52■■□□□ 1.68
HLA-C-208ENST00000487245 HABP4Q5JVS0 413 aaKnown RBP25.52■■□□□ 1.68
HLA-C-208ENST00000487245 TCAIMQ8N3R3 496 aa25.52■■□□□ 1.68
HLA-C-208ENST00000487245 ZNF548Q8NEK5 533 aaPredicted RBP25.52■■□□□ 1.68
HLA-C-208ENST00000487245 OR2T12Q8NG77 320 aa25.52■■□□□ 1.68
HLA-C-208ENST00000487245 CORO1BQ9BR76 489 aa25.52■■□□□ 1.68
HLA-C-208ENST00000487245 VAPAQ9P0L0 249 aa25.52■■□□□ 1.68
HLA-C-208ENST00000487245 TMEM9Q9P0T7 183 aa25.52■■□□□ 1.68
HLA-C-208ENST00000487245 IGLV3-16A0A075B6K0 115 aa25.51■■□□□ 1.67
HLA-C-208ENST00000487245 DFNA5O60443 496 aa25.51■■□□□ 1.67
HLA-C-208ENST00000487245 SCELO95171 688 aa25.51■■□□□ 1.67
HLA-C-208ENST00000487245 CPNE6O95741 557 aa25.51■■□□□ 1.67
HLA-C-208ENST00000487245 FGF19O95750 216 aa25.51■■□□□ 1.67
HLA-C-208ENST00000487245 TIMP1P01033 207 aa25.51■■□□□ 1.67
HLA-C-208ENST00000487245 MT-ND1P03886 318 aa25.51■■□□□ 1.67
HLA-C-208ENST00000487245 HOXB6P17509 224 aaKnown RBP25.51■■□□□ 1.67
HLA-C-208ENST00000487245 DDX6P26196 483 aaKnown RBP eCLIP25.51■■□□□ 1.677e-14■■□□□ 12.5
HLA-C-208ENST00000487245 HLA-FP30511 346 aa25.51■■□□□ 1.67
HLA-C-208ENST00000487245 GNPDA1P46926 289 aa25.51■■□□□ 1.67
HLA-C-208ENST00000487245 POLR2LP62875 67 aaKnown RBP25.51■■□□□ 1.67
HLA-C-208ENST00000487245 PTSQ03393 145 aa25.51■■□□□ 1.67
HLA-C-208ENST00000487245 CYP4F3Q08477 520 aa25.51■■□□□ 1.67
HLA-C-208ENST00000487245 PMS2P3Q13401 168 aa25.51■■□□□ 1.67
HLA-C-208ENST00000487245 CROCCP3Q8IVE0 287 aa25.51■■□□□ 1.67
HLA-C-208ENST00000487245 USP7Q93009 1102 aa25.51■■□□□ 1.67
HLA-C-208ENST00000487245 VOPP1Q96AW1 172 aa25.51■■□□□ 1.67
HLA-C-208ENST00000487245 OSBPL6Q9BZF3 934 aa25.51■■□□□ 1.67
HLA-C-208ENST00000487245 ZNHIT2Q9UHR6 403 aa25.51■■□□□ 1.67
HLA-C-208ENST00000487245 THRBP10828 461 aa25.51■■□□□ 1.67
HLA-C-208ENST00000487245 PCSK2P16519 638 aa25.51■■□□□ 1.67
HLA-C-208ENST00000487245 GJA1P17302 382 aa25.51■■□□□ 1.67
HLA-C-208ENST00000487245 SOX11P35716 441 aa25.51■■□□□ 1.67
HLA-C-208ENST00000487245 EPS8Q12929 822 aa25.51■■□□□ 1.67
HLA-C-208ENST00000487245 RAB39AQ14964 217 aa25.51■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms