RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 UGT2B7P16662 529 aa23.74■■□□□ 1.39
LIME1-206ENST00000487026 ADRA1DP25100 572 aa23.74■■□□□ 1.39
LIME1-206ENST00000487026 PTGIRP43119 386 aa23.74■■□□□ 1.39
LIME1-206ENST00000487026 ITGA1P56199 1179 aa23.74■■□□□ 1.39
LIME1-206ENST00000487026 SEMA3AQ14563 771 aa23.74■■□□□ 1.39
LIME1-206ENST00000487026 ZIC1Q15915 447 aa23.74■■□□□ 1.39
LIME1-206ENST00000487026 ZNF534Q76KX8 674 aa23.74■■□□□ 1.39
LIME1-206ENST00000487026 SYTL1Q8IYJ3 562 aa23.74■■□□□ 1.39
LIME1-206ENST00000487026 TBC1D21Q8IYX1 336 aa23.74■■□□□ 1.39
LIME1-206ENST00000487026 OR4L1Q8NH43 312 aa23.74■■□□□ 1.39
LIME1-206ENST00000487026 TBRG4Q969Z0 631 aaKnown RBP eCLIP23.74■■□□□ 1.39
LIME1-206ENST00000487026 OR2A14Q96R47 310 aa23.74■■□□□ 1.39
LIME1-206ENST00000487026 NLNQ9BYT8 704 aa23.74■■□□□ 1.39
LIME1-206ENST00000487026 ING2Q9H160 280 aa23.74■■□□□ 1.39
LIME1-206ENST00000487026 CASS4Q9NQ75 786 aa23.74■■□□□ 1.39
LIME1-206ENST00000487026 TCFL5Q9UL49 500 aa23.74■■□□□ 1.39
LIME1-206ENST00000487026 TNRC6AQ8NDV7 1962 aaKnown RBP23.73■■□□□ 1.39
LIME1-206ENST00000487026 E7EQ34 232 aa23.73■■□□□ 1.39
LIME1-206ENST00000487026 CHRM5P08912 532 aaPredicted RBP23.73■■□□□ 1.39
LIME1-206ENST00000487026 ZSCAN5DPP0CG00 497 aa23.73■■□□□ 1.39
LIME1-206ENST00000487026 SHMT2P34897 504 aa23.73■■□□□ 1.39
LIME1-206ENST00000487026 DEFB110Q30KQ9 67 aa23.73■■□□□ 1.39
LIME1-206ENST00000487026 LYPLAL1Q5VWZ2 237 aa23.73■■□□□ 1.39
LIME1-206ENST00000487026 AFTPHQ6ULP2 937 aa23.73■■□□□ 1.39
LIME1-206ENST00000487026 FAM198BQ6UWH4 519 aa23.73■■□□□ 1.39
LIME1-206ENST00000487026 LDB1Q86U70 411 aaPredicted RBP23.73■■□□□ 1.39
LIME1-206ENST00000487026 C19orf47Q8N9M1 422 aaKnown RBP23.73■■□□□ 1.39
LIME1-206ENST00000487026 OR5K2Q8NHB8 316 aa23.73■■□□□ 1.39
LIME1-206ENST00000487026 ADAMTS17Q8TE56 1095 aa23.73■■□□□ 1.39
LIME1-206ENST00000487026 RANBP9Q96S59 729 aa23.73■■□□□ 1.39
LIME1-206ENST00000487026 FRMD8P1Q9BZ68 369 aaPredicted RBP23.73■■□□□ 1.39
LIME1-206ENST00000487026 SPRTNQ9H040 489 aaPredicted RBP23.73■■□□□ 1.39
LIME1-206ENST00000487026 ACSS2Q9NR19 701 aa23.73■■□□□ 1.39
LIME1-206ENST00000487026 POLG2Q9UHN1 485 aa23.73■■□□□ 1.39
LIME1-206ENST00000487026 MED13Q9UHV7 2174 aa23.72■■□□□ 1.39
LIME1-206ENST00000487026 CTSBP07858 339 aa23.72■■□□□ 1.39
LIME1-206ENST00000487026 CCR7P32248 378 aa23.72■■□□□ 1.39
LIME1-206ENST00000487026 FLVCR1-AS1Q8TAF5 88 aa23.72■■□□□ 1.39
LIME1-206ENST00000487026 N4BP2L2Q92802 583 aaPredicted RBP23.72■■□□□ 1.39
LIME1-206ENST00000487026 TTC1Q99614 292 aa23.72■■□□□ 1.39
LIME1-206ENST00000487026 SLC25A23Q9BV35 468 aa23.72■■□□□ 1.39
LIME1-206ENST00000487026 PTPN13Q12923 2485 aa23.72■■□□□ 1.39
LIME1-206ENST00000487026 SEC16AO15027 2179 aa23.71■■□□□ 1.39
LIME1-206ENST00000487026 IQCF5A8MTL0 148 aa23.71■■□□□ 1.39
LIME1-206ENST00000487026 APRTP07741 180 aa23.71■■□□□ 1.39
LIME1-206ENST00000487026 ACVR1Q04771 509 aa23.71■■□□□ 1.39
LIME1-206ENST00000487026 FASTKD1Q53R41 847 aaKnown RBP23.71■■□□□ 1.39
LIME1-206ENST00000487026 VRK3Q8IV63 474 aa23.71■■□□□ 1.39
LIME1-206ENST00000487026 FAM20CQ8IXL6 584 aa23.71■■□□□ 1.39
LIME1-206ENST00000487026 CCDC89Q8N998 374 aa23.71■■□□□ 1.39
LIME1-206ENST00000487026 LMNTD1Q8N9Z9 388 aa23.71■■□□□ 1.39
LIME1-206ENST00000487026 LKAAEAR1Q8TD35 194 aa23.71■■□□□ 1.39
LIME1-206ENST00000487026 TCTN2Q96GX1 697 aa23.71■■□□□ 1.39
LIME1-206ENST00000487026 TSGA10Q9BZW7 698 aa23.71■■□□□ 1.39
LIME1-206ENST00000487026 CHRAC1Q9NRG0 131 aa23.71■■□□□ 1.39
LIME1-206ENST00000487026 CIDEBQ9UHD4 219 aa23.71■■□□□ 1.39
LIME1-206ENST00000487026 RIMKLBQ9ULI2 386 aa23.71■■□□□ 1.39
LIME1-206ENST00000487026 TCAF1Q9Y4C2 921 aa23.71■■□□□ 1.39
LIME1-206ENST00000487026 ISM1B1AKI9 464 aa23.7■■□□□ 1.38
LIME1-206ENST00000487026 KRT86O43790 486 aa23.7■■□□□ 1.38
LIME1-206ENST00000487026 CBSLP0DN79 551 aa23.7■■□□□ 1.38
LIME1-206ENST00000487026 RPL22P35268 128 aaKnown RBP23.7■■□□□ 1.38
LIME1-206ENST00000487026 CBSP35520 551 aa23.7■■□□□ 1.38
LIME1-206ENST00000487026 GABRA4P48169 554 aa23.7■■□□□ 1.38
LIME1-206ENST00000487026 PGDP52209 483 aa23.7■■□□□ 1.38
LIME1-206ENST00000487026 PRAMEP78395 509 aa23.7■■□□□ 1.38
LIME1-206ENST00000487026 PLOD1Q02809 727 aaPredicted RBP23.7■■□□□ 1.38
LIME1-206ENST00000487026 HSPA14Q0VDF9 509 aa23.7■■□□□ 1.38
LIME1-206ENST00000487026 RPS6KA1Q15418 735 aa23.7■■□□□ 1.38
LIME1-206ENST00000487026 KCTD19Q17RG1 926 aaPredicted RBP23.7■■□□□ 1.38
LIME1-206ENST00000487026 MEI1Q5TIA1 1274 aa23.7■■□□□ 1.38
LIME1-206ENST00000487026 C1orf189Q5VU69 101 aa23.7■■□□□ 1.38
LIME1-206ENST00000487026 GPR135Q8IZ08 494 aa23.7■■□□□ 1.38
LIME1-206ENST00000487026 CFAP61Q8NHU2 1237 aa23.7■■□□□ 1.38
LIME1-206ENST00000487026 MIB2Q96AX9 1013 aa23.7■■□□□ 1.38
LIME1-206ENST00000487026 AP1M1Q9BXS5 423 aa23.7■■□□□ 1.38
LIME1-206ENST00000487026 OR6C2Q9NZP2 312 aa23.7■■□□□ 1.38
LIME1-206ENST00000487026 PAK5Q9P286 719 aa23.7■■□□□ 1.38
LIME1-206ENST00000487026 A0A0J9YY10 115 aa23.69■■□□□ 1.38
LIME1-206ENST00000487026 OR2B3O76000 313 aa23.69■■□□□ 1.38
LIME1-206ENST00000487026 TMEM63AO94886 807 aa23.69■■□□□ 1.38
LIME1-206ENST00000487026 PEBP1P30086 187 aaKnown RBP23.69■■□□□ 1.38
LIME1-206ENST00000487026 SESN2P58004 480 aaPredicted RBP23.69■■□□□ 1.38
LIME1-206ENST00000487026 UBAP2LQ14157 1087 aaKnown RBP23.69■■□□□ 1.38
LIME1-206ENST00000487026 NCF4Q15080 339 aa23.69■■□□□ 1.38
LIME1-206ENST00000487026 SIX1Q15475 284 aaPredicted RBP23.69■■□□□ 1.38
LIME1-206ENST00000487026 ZNF385CQ66K41 422 aaPredicted RBP23.69■■□□□ 1.38
LIME1-206ENST00000487026 NLRP9Q7RTR0 991 aa23.69■■□□□ 1.38
LIME1-206ENST00000487026 KRT222Q8N1A0 295 aa23.69■■□□□ 1.38
LIME1-206ENST00000487026 C2orf73Q8N5S3 287 aaPredicted RBP23.69■■□□□ 1.38
LIME1-206ENST00000487026 ZBTB2Q8N680 514 aa23.69■■□□□ 1.38
LIME1-206ENST00000487026 PPHLN1Q8NEY8 458 aaKnown RBP23.69■■□□□ 1.38
LIME1-206ENST00000487026 MARCH4Q9P2E8 410 aaPredicted RBP23.69■■□□□ 1.38
LIME1-206ENST00000487026 CDYLQ9Y232 598 aa23.69■■□□□ 1.38
LIME1-206ENST00000487026 KLHL20Q9Y2M5 609 aa23.69■■□□□ 1.38
LIME1-206ENST00000487026 A6NL46 340 aa23.68■■□□□ 1.38
LIME1-206ENST00000487026 H3BMH7 237 aa23.68■■□□□ 1.38
LIME1-206ENST00000487026 ZNF185O15231 689 aa23.68■■□□□ 1.38
LIME1-206ENST00000487026 HBQ1P09105 142 aa23.68■■□□□ 1.38
LIME1-206ENST00000487026 AGXTP21549 392 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms