RNA–Protein interactions for RNA: ENST00000485985.1

LMBR1-217, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-217ENST00000485985 TRAPPC9Q96Q05 1148 aa20.2■□□□□ 0.82
LMBR1-217ENST00000485985 CHST8Q9H2A9 424 aa20.2■□□□□ 0.82
LMBR1-217ENST00000485985 FANCEQ9HB96 536 aa20.2■□□□□ 0.82
LMBR1-217ENST00000485985 RIMKLBQ9ULI2 386 aa20.2■□□□□ 0.82
LMBR1-217ENST00000485985 C2orf74A8MZ97 194 aa20.19■□□□□ 0.82
LMBR1-217ENST00000485985 E7EVH7 732 aa20.19■□□□□ 0.82
LMBR1-217ENST00000485985 QSOX1O00391 747 aa20.19■□□□□ 0.82
LMBR1-217ENST00000485985 ZSCAN5DPP0CG00 497 aa20.19■□□□□ 0.82
LMBR1-217ENST00000485985 RORAP35398 523 aa20.19■□□□□ 0.82
LMBR1-217ENST00000485985 UGT8Q16880 541 aa20.19■□□□□ 0.82
LMBR1-217ENST00000485985 PLEKHS1Q5SXH7 462 aa20.19■□□□□ 0.82
LMBR1-217ENST00000485985 IZUMO3Q5VZ72 239 aa20.19■□□□□ 0.82
LMBR1-217ENST00000485985 SPESP1Q6UW49 350 aa20.19■□□□□ 0.82
LMBR1-217ENST00000485985 CDHR3Q6ZTQ4 885 aa20.19■□□□□ 0.82
LMBR1-217ENST00000485985 DSELQ8IZU8 1212 aa20.19■□□□□ 0.82
LMBR1-217ENST00000485985 EFCAB3Q8N7B9 438 aa20.19■□□□□ 0.82
LMBR1-217ENST00000485985 GALNT11Q8NCW6 608 aa20.19■□□□□ 0.82
LMBR1-217ENST00000485985 FLVCR1-AS1Q8TAF5 88 aa20.19■□□□□ 0.82
LMBR1-217ENST00000485985 LKAAEAR1Q8TD35 194 aa20.19■□□□□ 0.82
LMBR1-217ENST00000485985 CPT1BQ92523 772 aa20.19■□□□□ 0.82
LMBR1-217ENST00000485985 LRFN5Q96NI6 719 aa20.19■□□□□ 0.82
LMBR1-217ENST00000485985 ASF1AQ9Y294 204 aa20.19■□□□□ 0.82
LMBR1-217ENST00000485985 TCAF1Q9Y4C2 921 aa20.19■□□□□ 0.82
LMBR1-217ENST00000485985 NUP210LQ5VU65 1888 aa20.19■□□□□ 0.82
LMBR1-217ENST00000485985 UNC79Q9P2D8 2635 aa20.18■□□□□ 0.82
LMBR1-217ENST00000485985 GAS8O95995 478 aa20.18■□□□□ 0.82
LMBR1-217ENST00000485985 APRTP07741 180 aa20.18■□□□□ 0.82
LMBR1-217ENST00000485985 GNLYP22749 145 aa20.18■□□□□ 0.82
LMBR1-217ENST00000485985 ADRA1DP25100 572 aa20.18■□□□□ 0.82
LMBR1-217ENST00000485985 SYTL3Q4VX76 610 aa20.18■□□□□ 0.82
LMBR1-217ENST00000485985 FAM69BQ5VUD6 431 aa20.18■□□□□ 0.82
LMBR1-217ENST00000485985 CPZQ66K79 652 aa20.18■□□□□ 0.82
LMBR1-217ENST00000485985 FAM198BQ6UWH4 519 aa20.18■□□□□ 0.82
LMBR1-217ENST00000485985 SYVN1Q86TM6 617 aa20.18■□□□□ 0.82
LMBR1-217ENST00000485985 CCDC89Q8N998 374 aa20.18■□□□□ 0.82
LMBR1-217ENST00000485985 CPT1CQ8TCG5 803 aa20.18■□□□□ 0.82
LMBR1-217ENST00000485985 TBRG4Q969Z0 631 aaKnown RBP eCLIP20.18■□□□□ 0.82
LMBR1-217ENST00000485985 PCMTD2Q9NV79 361 aa20.18■□□□□ 0.82
LMBR1-217ENST00000485985 SPHK1Q9NYA1 384 aa20.18■□□□□ 0.82
LMBR1-217ENST00000485985 PLAGL1Q9UM63 463 aa20.18■□□□□ 0.82
LMBR1-217ENST00000485985 ANKRD12Q6UB98 2062 aa20.17■□□□□ 0.82
LMBR1-217ENST00000485985 GOLGA6L6A8MZA4 724 aa20.17■□□□□ 0.82
LMBR1-217ENST00000485985 MEN1O00255 615 aa20.17■□□□□ 0.82
LMBR1-217ENST00000485985 HCRTR1O43613 425 aa20.17■□□□□ 0.82
LMBR1-217ENST00000485985 AGFG2O95081 481 aa20.17■□□□□ 0.82
LMBR1-217ENST00000485985 OR56A5P0C7T3 313 aa20.17■□□□□ 0.82
LMBR1-217ENST00000485985 UGT2B7P16662 529 aa20.17■□□□□ 0.82
LMBR1-217ENST00000485985 SHMT2P34897 504 aa20.17■□□□□ 0.82
LMBR1-217ENST00000485985 RPL22P35268 128 aaKnown RBP20.17■□□□□ 0.82
LMBR1-217ENST00000485985 PGDP52209 483 aa20.17■□□□□ 0.82
LMBR1-217ENST00000485985 GSDMDP57764 484 aa20.17■□□□□ 0.82
LMBR1-217ENST00000485985 RPS15P62841 145 aaKnown RBP20.17■□□□□ 0.82
LMBR1-217ENST00000485985 RPS6KA1Q15418 735 aa20.17■□□□□ 0.82
LMBR1-217ENST00000485985 ZIC1Q15915 447 aa20.17■□□□□ 0.82
LMBR1-217ENST00000485985 KCTD19Q17RG1 926 aaPredicted RBP20.17■□□□□ 0.82
LMBR1-217ENST00000485985 FHL5Q5TD97 284 aa20.17■□□□□ 0.82
LMBR1-217ENST00000485985 UNC5AQ6ZN44 842 aa20.17■□□□□ 0.82
LMBR1-217ENST00000485985 VRK3Q8IV63 474 aa20.17■□□□□ 0.82
LMBR1-217ENST00000485985 TBC1D21Q8IYX1 336 aa20.17■□□□□ 0.82
LMBR1-217ENST00000485985 OR4L1Q8NH43 312 aa20.17■□□□□ 0.82
LMBR1-217ENST00000485985 OR5K2Q8NHB8 316 aa20.17■□□□□ 0.82
LMBR1-217ENST00000485985 CLIP3Q96DZ5 547 aa20.17■□□□□ 0.82
LMBR1-217ENST00000485985 OR2A14Q96R47 310 aa20.17■□□□□ 0.82
LMBR1-217ENST00000485985 SLC25A23Q9BV35 468 aa20.17■□□□□ 0.82
LMBR1-217ENST00000485985 ACTR5Q9H9F9 607 aaPredicted RBP20.17■□□□□ 0.82
LMBR1-217ENST00000485985 FAM60AQ9NP50 221 aa20.17■□□□□ 0.82
LMBR1-217ENST00000485985 MLXIPLQ9NP71 852 aa20.17■□□□□ 0.82
LMBR1-217ENST00000485985 PAK5Q9P286 719 aa20.17■□□□□ 0.82
LMBR1-217ENST00000485985 MARCH4Q9P2E8 410 aaPredicted RBP20.17■□□□□ 0.82
LMBR1-217ENST00000485985 PLEKHB1Q9UF11 243 aaPredicted RBP20.17■□□□□ 0.82
LMBR1-217ENST00000485985 FARSAQ9Y285 508 aaKnown RBP20.17■□□□□ 0.82
LMBR1-217ENST00000485985 PCDHGA9Q9Y5G4 932 aaKnown RBP20.17■□□□□ 0.82
LMBR1-217ENST00000485985 PCM1Q15154 2024 aa20.16■□□□□ 0.82
LMBR1-217ENST00000485985 CAPN1P07384 714 aa20.16■□□□□ 0.82
LMBR1-217ENST00000485985 CHRM5P08912 532 aaPredicted RBP20.16■□□□□ 0.82
LMBR1-217ENST00000485985 CYP2A7P20853 494 aa20.16■□□□□ 0.82
LMBR1-217ENST00000485985 CCR7P32248 378 aa20.16■□□□□ 0.82
LMBR1-217ENST00000485985 CSE1LP55060 971 aaKnown RBP20.16■□□□□ 0.82
LMBR1-217ENST00000485985 CRADDP78560 199 aa20.16■□□□□ 0.82
LMBR1-217ENST00000485985 CHAF1BQ13112 559 aa20.16■□□□□ 0.82
LMBR1-217ENST00000485985 DEFB110Q30KQ9 67 aa20.16■□□□□ 0.82
LMBR1-217ENST00000485985 PTCHD3Q3KNS1 767 aa20.16■□□□□ 0.82
LMBR1-217ENST00000485985 LYPLAL1Q5VWZ2 237 aa20.16■□□□□ 0.82
LMBR1-217ENST00000485985 HIST2H2BCQ6DN03 193 aa20.16■□□□□ 0.82
LMBR1-217ENST00000485985 LDB1Q86U70 411 aaPredicted RBP20.16■□□□□ 0.82
LMBR1-217ENST00000485985 SYTL1Q8IYJ3 562 aa20.16■□□□□ 0.82
LMBR1-217ENST00000485985 ENDOVQ8N8Q3 282 aaKnown RBP20.16■□□□□ 0.82
LMBR1-217ENST00000485985 C19orf47Q8N9M1 422 aaKnown RBP20.16■□□□□ 0.82
LMBR1-217ENST00000485985 OR6P1Q8NGX9 317 aa20.16■□□□□ 0.82
LMBR1-217ENST00000485985 ADAMTS17Q8TE56 1095 aa20.16■□□□□ 0.82
LMBR1-217ENST00000485985 SGSM3Q96HU1 749 aa20.16■□□□□ 0.82
LMBR1-217ENST00000485985 SYTL2Q9HCH5 934 aa20.16■□□□□ 0.82
LMBR1-217ENST00000485985 LZTFL1Q9NQ48 299 aa20.16■□□□□ 0.82
LMBR1-217ENST00000485985 CDYLQ9Y232 598 aa20.16■□□□□ 0.82
LMBR1-217ENST00000485985 TDRKHQ9Y2W6 561 aaKnown RBP20.16■□□□□ 0.82
LMBR1-217ENST00000485985 NBPF19A0A087WUL8 3843 aa20.15■□□□□ 0.82
LMBR1-217ENST00000485985 ARGFXA6NJG6 315 aa20.15■□□□□ 0.82
LMBR1-217ENST00000485985 IQCF5A8MTL0 148 aa20.15■□□□□ 0.82
LMBR1-217ENST00000485985 H3BMH7 237 aa20.15■□□□□ 0.82
LMBR1-217ENST00000485985 KLK3P07288 261 aaPredicted RBP20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms