RNA–Protein interactions for RNA: ENST00000484246.5

UPF3A-208, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 699 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-208ENST00000484246 CCNFP41002 786 aa15.42■□□□□ 0.06
UPF3A-208ENST00000484246 ETV5P41161 510 aa15.42■□□□□ 0.06
UPF3A-208ENST00000484246 PPM1FP49593 454 aaPredicted RBP15.42■□□□□ 0.06
UPF3A-208ENST00000484246 CSE1LP55060 971 aaKnown RBP15.42■□□□□ 0.06
UPF3A-208ENST00000484246 RAB15P59190 212 aa15.42■□□□□ 0.06
UPF3A-208ENST00000484246 PPP1CAP62136 330 aa15.42■□□□□ 0.06
UPF3A-208ENST00000484246 GUCY2DQ02846 1103 aa15.42■□□□□ 0.06
UPF3A-208ENST00000484246 GRB7Q14451 532 aa15.42■□□□□ 0.06
UPF3A-208ENST00000484246 ACSBG2Q5FVE4 666 aa15.42■□□□□ 0.06
UPF3A-208ENST00000484246 LRRC8EQ6NSJ5 796 aa15.42■□□□□ 0.06
UPF3A-208ENST00000484246 IRGCQ6NXR0 463 aa15.42■□□□□ 0.06
UPF3A-208ENST00000484246 ADGRF3Q8IZF5 1079 aa15.42■□□□□ 0.06
UPF3A-208ENST00000484246 FBXO15Q8NCQ5 510 aaPredicted RBP15.42■□□□□ 0.06
UPF3A-208ENST00000484246 OR4E2Q8NGC2 313 aa15.42■□□□□ 0.06
UPF3A-208ENST00000484246 INPP5DQ92835 1189 aa15.42■□□□□ 0.06
UPF3A-208ENST00000484246 SLC30A3Q99726 388 aa15.42■□□□□ 0.06
UPF3A-208ENST00000484246 RAB11FIP5Q9BXF6 653 aa15.42■□□□□ 0.06
UPF3A-208ENST00000484246 PITPNM3Q9BZ71 974 aa15.42■□□□□ 0.06
UPF3A-208ENST00000484246 ZFATQ9P243 1243 aa15.42■□□□□ 0.06
UPF3A-208ENST00000484246 GALPQ9UBC7 116 aa15.42■□□□□ 0.06
UPF3A-208ENST00000484246 DMGDHQ9UI17 866 aaKnown RBP15.42■□□□□ 0.06
UPF3A-208ENST00000484246 IGF2RP11717 2491 aa15.42■□□□□ 0.06
UPF3A-208ENST00000484246 MAP1BP46821 2468 aaKnown RBP15.41■□□□□ 0.06
UPF3A-208ENST00000484246 A0A087WV48 116 aa15.41■□□□□ 0.06
UPF3A-208ENST00000484246 TCRBV9S1A1TA0A576 114 aa15.41■□□□□ 0.06
UPF3A-208ENST00000484246 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.41■□□□□ 0.06
UPF3A-208ENST00000484246 BTN3A3O00478 584 aa15.41■□□□□ 0.06
UPF3A-208ENST00000484246 BTN3A1O00481 513 aa15.41■□□□□ 0.06
UPF3A-208ENST00000484246 TLX3O43711 291 aaPredicted RBP15.41■□□□□ 0.06
UPF3A-208ENST00000484246 C1orf105O95561 183 aa15.41■□□□□ 0.06
UPF3A-208ENST00000484246 F7P08709 466 aaPredicted RBP15.41■□□□□ 0.06
UPF3A-208ENST00000484246 MPC1LP0DKB6 136 aa15.41■□□□□ 0.06
UPF3A-208ENST00000484246 CCL4P13236 92 aa15.41■□□□□ 0.06
UPF3A-208ENST00000484246 NELFEP18615 380 aaKnown RBP15.41■□□□□ 0.06
UPF3A-208ENST00000484246 ITIH1P19827 911 aa15.41■□□□□ 0.06
UPF3A-208ENST00000484246 CD82P27701 267 aa15.41■□□□□ 0.06
UPF3A-208ENST00000484246 SKIV2L2P42285 1042 aaKnown RBP15.41■□□□□ 0.06
UPF3A-208ENST00000484246 RAB28P51157 221 aa15.41■□□□□ 0.06
UPF3A-208ENST00000484246 KPNA2P52292 529 aaKnown RBP15.41■□□□□ 0.06
UPF3A-208ENST00000484246 PCBP4P57723 403 aaKnown RBP15.41■□□□□ 0.06
UPF3A-208ENST00000484246 TIAL1Q01085 375 aaKnown RBP eCLIP15.41■□□□□ 0.06
UPF3A-208ENST00000484246 MC2RQ01718 297 aa15.41■□□□□ 0.06
UPF3A-208ENST00000484246 PRKAA1Q13131 559 aa15.41■□□□□ 0.06
UPF3A-208ENST00000484246 PRKG2Q13237 762 aa15.41■□□□□ 0.06
UPF3A-208ENST00000484246 DNTTIP2Q5QJE6 756 aaKnown RBP15.41■□□□□ 0.06
UPF3A-208ENST00000484246 UGT3A1Q6NUS8 523 aa15.41■□□□□ 0.06
UPF3A-208ENST00000484246 ARMC6Q6NXE6 501 aa15.41■□□□□ 0.06
UPF3A-208ENST00000484246 HMGCLL1Q8TB92 370 aa15.41■□□□□ 0.06
UPF3A-208ENST00000484246 RAD51AP1Q96B01 352 aa15.41■□□□□ 0.06
UPF3A-208ENST00000484246 FOPNLQ96NB1 174 aa15.41■□□□□ 0.06
UPF3A-208ENST00000484246 TEFMQ96QE5 360 aaKnown RBP15.41■□□□□ 0.06
UPF3A-208ENST00000484246 TAAR9Q96RI9 348 aa15.41■□□□□ 0.06
UPF3A-208ENST00000484246 GPR21Q99679 349 aa15.41■□□□□ 0.06
UPF3A-208ENST00000484246 TSPYL1Q9H0U9 437 aa15.41■□□□□ 0.06
UPF3A-208ENST00000484246 PPANQ9NQ55 473 aaKnown RBP15.41■□□□□ 0.06
UPF3A-208ENST00000484246 FBXO8Q9NRD0 319 aa15.41■□□□□ 0.06
UPF3A-208ENST00000484246 TAS2R13Q9NYV9 303 aa15.41■□□□□ 0.06
UPF3A-208ENST00000484246 SLC17A6Q9P2U8 582 aa15.41■□□□□ 0.06
UPF3A-208ENST00000484246 ZMIZ1Q9ULJ6 1067 aa15.41■□□□□ 0.06
UPF3A-208ENST00000484246 BTRCQ9Y297 605 aa15.41■□□□□ 0.06
UPF3A-208ENST00000484246 FAM159BA6NKW6 160 aa15.4■□□□□ 0.06
UPF3A-208ENST00000484246 EFCAB7A8K855 629 aa15.4■□□□□ 0.06
UPF3A-208ENST00000484246 C2orf74A8MZ97 194 aa15.4■□□□□ 0.06
UPF3A-208ENST00000484246 C9orf172C9J069 976 aa15.4■□□□□ 0.06
UPF3A-208ENST00000484246 ZNF500O60304 480 aaPredicted RBP15.4■□□□□ 0.06
UPF3A-208ENST00000484246 PSIP1O75475 530 aaKnown RBP15.4■□□□□ 0.06
UPF3A-208ENST00000484246 MSL3P1P0C860 447 aa15.4■□□□□ 0.06
UPF3A-208ENST00000484246 ERGP11308 486 aa15.4■□□□□ 0.06
UPF3A-208ENST00000484246 FDXRP22570 491 aa15.4■□□□□ 0.06
UPF3A-208ENST00000484246 ECHS1P30084 290 aa15.4■□□□□ 0.06
UPF3A-208ENST00000484246 SSTR1P30872 391 aa15.4■□□□□ 0.06
UPF3A-208ENST00000484246 MAGEA4P43358 317 aa15.4■□□□□ 0.06
UPF3A-208ENST00000484246 GPX6P59796 221 aa15.4■□□□□ 0.06
UPF3A-208ENST00000484246 ABRQ12979 859 aa15.4■□□□□ 0.06
UPF3A-208ENST00000484246 KLHL38Q2WGJ6 581 aa15.4■□□□□ 0.06
UPF3A-208ENST00000484246 SNAP47Q5SQN1 464 aa15.4■□□□□ 0.06
UPF3A-208ENST00000484246 RBM20Q5T481 1227 aaKnown RBP15.4■□□□□ 0.06
UPF3A-208ENST00000484246 CACHD1Q5VU97 1274 aa15.4■□□□□ 0.06
UPF3A-208ENST00000484246 FAM45BPQ6NSW5 357 aa15.4■□□□□ 0.06
UPF3A-208ENST00000484246 FAM92BQ6ZTR7 304 aa15.4■□□□□ 0.06
UPF3A-208ENST00000484246 ZC3HC1Q86WB0 502 aaKnown RBP15.4■□□□□ 0.06
UPF3A-208ENST00000484246 PALM2Q8IXS6 379 aa15.4■□□□□ 0.06
UPF3A-208ENST00000484246 SIDT2Q8NBJ9 832 aaKnown RBP15.4■□□□□ 0.06
UPF3A-208ENST00000484246 FLVCR1-AS1Q8TAF5 88 aa15.4■□□□□ 0.06
UPF3A-208ENST00000484246 FAM45AQ8TCE6 357 aa15.4■□□□□ 0.06
UPF3A-208ENST00000484246 MAGEC3Q8TD91 643 aa15.4■□□□□ 0.06
UPF3A-208ENST00000484246 CDKL2Q92772 493 aa15.4■□□□□ 0.06
UPF3A-208ENST00000484246 FAM136AQ96C01 138 aa15.4■□□□□ 0.06
UPF3A-208ENST00000484246 NDNQ99608 321 aa15.4■□□□□ 0.06
UPF3A-208ENST00000484246 MAP3K3Q99759 626 aa15.4■□□□□ 0.06
UPF3A-208ENST00000484246 ZPBPQ9BS86 351 aa15.4■□□□□ 0.06
UPF3A-208ENST00000484246 CHRNA10Q9GZZ6 450 aa15.4■□□□□ 0.06
UPF3A-208ENST00000484246 RHOJQ9H4E5 214 aa15.4■□□□□ 0.06
UPF3A-208ENST00000484246 C1GALT1Q9NS00 363 aa15.4■□□□□ 0.06
UPF3A-208ENST00000484246 ACTR10Q9NZ32 417 aa15.4■□□□□ 0.06
UPF3A-208ENST00000484246 SPATA7Q9P0W8 599 aa15.4■□□□□ 0.06
UPF3A-208ENST00000484246 MTRF1LQ9UGC7 380 aaKnown RBP15.4■□□□□ 0.06
UPF3A-208ENST00000484246 KLHL3Q9UH77 587 aa15.4■□□□□ 0.06
UPF3A-208ENST00000484246 TRMT6Q9UJA5 497 aaKnown RBP15.4■□□□□ 0.06
UPF3A-208ENST00000484246 PSAT1Q9Y617 370 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms