RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 IGLON5A6NGN9 336 aa8.63□□□□□ -1.03
CDC42SE1-204ENST00000483763 EIF3FO00303 357 aaPredicted RBP8.63□□□□□ -1.03
CDC42SE1-204ENST00000483763 NRP2O60462 931 aa8.63□□□□□ -1.03
CDC42SE1-204ENST00000483763 FTH1P02794 183 aa8.63□□□□□ -1.03
CDC42SE1-204ENST00000483763 C8GP07360 202 aa8.63□□□□□ -1.03
CDC42SE1-204ENST00000483763 EZRP15311 586 aaKnown RBP8.63□□□□□ -1.03
CDC42SE1-204ENST00000483763 EPB42P16452 691 aa8.63□□□□□ -1.03
CDC42SE1-204ENST00000483763 TCN1P20061 433 aaPredicted RBP8.63□□□□□ -1.03
CDC42SE1-204ENST00000483763 POU3F3P20264 500 aaPredicted RBP8.63□□□□□ -1.03
CDC42SE1-204ENST00000483763 ITPKAP23677 461 aa8.63□□□□□ -1.03
CDC42SE1-204ENST00000483763 IL12AP29459 219 aa8.63□□□□□ -1.03
CDC42SE1-204ENST00000483763 TIE1P35590 1138 aa8.63□□□□□ -1.03
CDC42SE1-204ENST00000483763 EIF2DP41214 584 aaKnown RBP8.63□□□□□ -1.03
CDC42SE1-204ENST00000483763 MLLT3P42568 568 aaPredicted RBP8.63□□□□□ -1.03
CDC42SE1-204ENST00000483763 GPR1P46091 355 aa8.63□□□□□ -1.03
CDC42SE1-204ENST00000483763 SLC6A12P48065 614 aa8.63□□□□□ -1.03
CDC42SE1-204ENST00000483763 ATP4BP51164 291 aa8.63□□□□□ -1.03
CDC42SE1-204ENST00000483763 ATXN3P54252 364 aaPredicted RBP8.63□□□□□ -1.03
CDC42SE1-204ENST00000483763 HMGCS1Q01581 520 aa8.63□□□□□ -1.03
CDC42SE1-204ENST00000483763 AGBL4Q5VU57 503 aa8.63□□□□□ -1.03
CDC42SE1-204ENST00000483763 MIER2Q8N344 545 aa8.63□□□□□ -1.03
CDC42SE1-204ENST00000483763 LMNTD1Q8N9Z9 388 aa8.63□□□□□ -1.03
CDC42SE1-204ENST00000483763 VPS33AQ96AX1 596 aa8.63□□□□□ -1.03
CDC42SE1-204ENST00000483763 PPP1R16AQ96I34 528 aa8.63□□□□□ -1.03
CDC42SE1-204ENST00000483763 NTMT1Q9BV86 223 aa8.63□□□□□ -1.03
CDC42SE1-204ENST00000483763 LGR4Q9BXB1 951 aa8.63□□□□□ -1.03
CDC42SE1-204ENST00000483763 HDAC8Q9BY41 377 aa8.63□□□□□ -1.03
CDC42SE1-204ENST00000483763 TRIM8Q9BZR9 551 aa8.63□□□□□ -1.03
CDC42SE1-204ENST00000483763 SLC6A17Q9H1V8 727 aa8.63□□□□□ -1.03
CDC42SE1-204ENST00000483763 ACTL8Q9H568 366 aa8.63□□□□□ -1.03
CDC42SE1-204ENST00000483763 RAD18Q9NS91 495 aa8.63□□□□□ -1.03
CDC42SE1-204ENST00000483763 ASPDHA6ND91 283 aa8.62□□□□□ -1.03
CDC42SE1-204ENST00000483763 PRORSD1PA6NEY8 169 aa8.62□□□□□ -1.03
CDC42SE1-204ENST00000483763 NR5A2O00482 541 aa8.62□□□□□ -1.03
CDC42SE1-204ENST00000483763 NPC1O15118 1278 aa8.62□□□□□ -1.03
CDC42SE1-204ENST00000483763 ATG13O75143 517 aa8.62□□□□□ -1.03
CDC42SE1-204ENST00000483763 CIB2O75838 187 aa8.62□□□□□ -1.03
CDC42SE1-204ENST00000483763 RSL1D1O76021 490 aaKnown RBP8.62□□□□□ -1.03
CDC42SE1-204ENST00000483763 CHEK2O96017 543 aa8.62□□□□□ -1.03
CDC42SE1-204ENST00000483763 IDO1P14902 403 aa8.62□□□□□ -1.03
CDC42SE1-204ENST00000483763 ZNF8P17098 575 aaPredicted RBP8.62□□□□□ -1.03
CDC42SE1-204ENST00000483763 NEK2P51955 445 aa8.62□□□□□ -1.03
CDC42SE1-204ENST00000483763 DPTQ07507 201 aa8.62□□□□□ -1.03
CDC42SE1-204ENST00000483763 CST6Q15828 149 aa8.62□□□□□ -1.03
CDC42SE1-204ENST00000483763 CPSF6Q16630 551 aaKnown RBP eCLIP8.62□□□□□ -1.03
CDC42SE1-204ENST00000483763 MMEL1Q495T6 779 aa8.62□□□□□ -1.03
CDC42SE1-204ENST00000483763 TMEM52BQ4KMG9 183 aa8.62□□□□□ -1.03
CDC42SE1-204ENST00000483763 SGO1Q5FBB7 561 aa8.62□□□□□ -1.03
CDC42SE1-204ENST00000483763 C8orf82Q6P1X6 216 aaPredicted RBP8.62□□□□□ -1.03
CDC42SE1-204ENST00000483763 C16orf89Q6UX73 402 aa8.62□□□□□ -1.03
CDC42SE1-204ENST00000483763 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.62□□□□□ -1.03
CDC42SE1-204ENST00000483763 BNC2Q6ZN30 1099 aaPredicted RBP8.62□□□□□ -1.03
CDC42SE1-204ENST00000483763 FNDC5Q8NAU1 212 aa8.62□□□□□ -1.03
CDC42SE1-204ENST00000483763 SPDYE1Q8NFV5 336 aaPredicted RBP8.62□□□□□ -1.03
CDC42SE1-204ENST00000483763 PROKR1Q8TCW9 393 aa8.62□□□□□ -1.03
CDC42SE1-204ENST00000483763 MIEF2Q96C03 454 aa8.62□□□□□ -1.03
CDC42SE1-204ENST00000483763 MTFMTQ96DP5 389 aaKnown RBP8.62□□□□□ -1.03
CDC42SE1-204ENST00000483763 CCM2Q9BSQ5 444 aa8.62□□□□□ -1.03
CDC42SE1-204ENST00000483763 SLC25A23Q9BV35 468 aa8.62□□□□□ -1.03
CDC42SE1-204ENST00000483763 RSPH9Q9H1X1 276 aaPredicted RBP8.62□□□□□ -1.03
CDC42SE1-204ENST00000483763 SLC32A1Q9H598 525 aa8.62□□□□□ -1.03
CDC42SE1-204ENST00000483763 DYRK4Q9NR20 520 aa8.62□□□□□ -1.03
CDC42SE1-204ENST00000483763 INTS7Q9NVH2 962 aaKnown RBP8.62□□□□□ -1.03
CDC42SE1-204ENST00000483763 AIG1Q9NVV5 245 aa8.62□□□□□ -1.03
CDC42SE1-204ENST00000483763 SLAMF8Q9P0V8 285 aa8.62□□□□□ -1.03
CDC42SE1-204ENST00000483763 THEGQ9P2T0 379 aa8.62□□□□□ -1.03
CDC42SE1-204ENST00000483763 STX18Q9P2W9 335 aaKnown RBP8.62□□□□□ -1.03
CDC42SE1-204ENST00000483763 KLQ9UEF7 1012 aa8.62□□□□□ -1.03
CDC42SE1-204ENST00000483763 TMEM98Q9Y2Y6 226 aa8.62□□□□□ -1.03
CDC42SE1-204ENST00000483763 ANGPTL3Q9Y5C1 460 aa8.62□□□□□ -1.03
CDC42SE1-204ENST00000483763 TRPM6Q9BX84 2022 aa8.62□□□□□ -1.03
CDC42SE1-204ENST00000483763 A0A1W2PP55 124 aa8.62□□□□□ -1.03
CDC42SE1-204ENST00000483763 ANKRD33BA6NCL7 494 aa8.62□□□□□ -1.03
CDC42SE1-204ENST00000483763 GRXCR2A6NFK2 248 aa8.62□□□□□ -1.03
CDC42SE1-204ENST00000483763 SYNCRIPO60506 623 aaKnown RBP8.62□□□□□ -1.03
CDC42SE1-204ENST00000483763 PSIP1O75475 530 aaKnown RBP8.62□□□□□ -1.03
CDC42SE1-204ENST00000483763 WDR47O94967 919 aa8.62□□□□□ -1.03
CDC42SE1-204ENST00000483763 SLC16A8O95907 504 aa8.62□□□□□ -1.03
CDC42SE1-204ENST00000483763 APODP05090 189 aa8.62□□□□□ -1.03
CDC42SE1-204ENST00000483763 HIST1H2AGP0C0S8 130 aaPredicted RBP8.62□□□□□ -1.03
CDC42SE1-204ENST00000483763 MPC1LP0DKB6 136 aa8.62□□□□□ -1.03
CDC42SE1-204ENST00000483763 G6PDP11413 515 aa8.62□□□□□ -1.03
CDC42SE1-204ENST00000483763 HIST1H2ADP20671 130 aa8.62□□□□□ -1.03
CDC42SE1-204ENST00000483763 PFN3P60673 137 aa8.62□□□□□ -1.03
CDC42SE1-204ENST00000483763 STX1BP61266 288 aa8.62□□□□□ -1.03
CDC42SE1-204ENST00000483763 PSME3P61289 254 aa8.62□□□□□ -1.03
CDC42SE1-204ENST00000483763 ERVK-8P63133 956 aa8.62□□□□□ -1.03
CDC42SE1-204ENST00000483763 CDKL1Q00532 357 aa8.62□□□□□ -1.03
CDC42SE1-204ENST00000483763 STX5Q13190 355 aa8.62□□□□□ -1.03
CDC42SE1-204ENST00000483763 CAMK2GQ13555 558 aaPredicted RBP8.62□□□□□ -1.03
CDC42SE1-204ENST00000483763 FGL2Q14314 439 aa8.62□□□□□ -1.03
CDC42SE1-204ENST00000483763 BLOC1S3Q6QNY0 202 aa8.62□□□□□ -1.03
CDC42SE1-204ENST00000483763 C11orf96Q7Z7L8 435 aa8.62□□□□□ -1.03
CDC42SE1-204ENST00000483763 TRAPPC5Q8IUR0 188 aa8.62□□□□□ -1.03
CDC42SE1-204ENST00000483763 CFAP206Q8IYR0 622 aa8.62□□□□□ -1.03
CDC42SE1-204ENST00000483763 SMRP1Q8NCR6 262 aa8.62□□□□□ -1.03
CDC42SE1-204ENST00000483763 PPFIBP2Q8ND30 876 aa8.62□□□□□ -1.03
CDC42SE1-204ENST00000483763 STMN2Q93045 179 aa8.62□□□□□ -1.03
CDC42SE1-204ENST00000483763 TMEM159Q96B96 161 aa8.62□□□□□ -1.03
CDC42SE1-204ENST00000483763 HIST1H2AHQ96KK5 128 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms