RNA–Protein interactions for RNA: ENST00000481260.1

RAPGEF1-207, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 1,034 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-207ENST00000481260 RAB15P59190 212 aa11.05□□□□□ -0.64
RAPGEF1-207ENST00000481260 YBX1P67809 324 aaKnown RBP11.05□□□□□ -0.64
RAPGEF1-207ENST00000481260 TIAL1Q01085 375 aaKnown RBP eCLIP11.05□□□□□ -0.64
RAPGEF1-207ENST00000481260 C2orf54Q08AI8 447 aa11.05□□□□□ -0.64
RAPGEF1-207ENST00000481260 TUBB3Q13509 450 aa11.05□□□□□ -0.64
RAPGEF1-207ENST00000481260 DEFB110Q30KQ9 67 aa11.05□□□□□ -0.64
RAPGEF1-207ENST00000481260 BBS9Q3SYG4 887 aa11.05□□□□□ -0.64
RAPGEF1-207ENST00000481260 ACSBG2Q5FVE4 666 aa11.05□□□□□ -0.64
RAPGEF1-207ENST00000481260 TMEM164Q5U3C3 297 aa11.05□□□□□ -0.64
RAPGEF1-207ENST00000481260 FAM69BQ5VUD6 431 aa11.05□□□□□ -0.64
RAPGEF1-207ENST00000481260 BROXQ5VW32 411 aa11.05□□□□□ -0.64
RAPGEF1-207ENST00000481260 LCN10Q6JVE6 187 aa11.05□□□□□ -0.64
RAPGEF1-207ENST00000481260 CEACAM20Q6UY09 585 aa11.05□□□□□ -0.64
RAPGEF1-207ENST00000481260 SYT10Q6XYQ8 523 aa11.05□□□□□ -0.64
RAPGEF1-207ENST00000481260 AMIGO1Q86WK6 493 aa11.05□□□□□ -0.64
RAPGEF1-207ENST00000481260 TMEM151BQ8IW70 566 aa11.05□□□□□ -0.64
RAPGEF1-207ENST00000481260 SIDT2Q8NBJ9 832 aaKnown RBP11.05□□□□□ -0.64
RAPGEF1-207ENST00000481260 SLC38A9Q8NBW4 561 aa11.05□□□□□ -0.64
RAPGEF1-207ENST00000481260 GRK7Q8WTQ7 553 aa11.05□□□□□ -0.64
RAPGEF1-207ENST00000481260 TTC9Q92623 222 aa11.05□□□□□ -0.64
RAPGEF1-207ENST00000481260 SLCO2A1Q92959 643 aa11.05□□□□□ -0.64
RAPGEF1-207ENST00000481260 STAMBPL1Q96FJ0 436 aa11.05□□□□□ -0.64
RAPGEF1-207ENST00000481260 OR2A14Q96R47 310 aa11.05□□□□□ -0.64
RAPGEF1-207ENST00000481260 ULBP3Q9BZM4 244 aa11.05□□□□□ -0.64
RAPGEF1-207ENST00000481260 MVB12BQ9H7P6 319 aa11.05□□□□□ -0.64
RAPGEF1-207ENST00000481260 XAB2Q9HCS7 855 aaKnown RBP11.05□□□□□ -0.64
RAPGEF1-207ENST00000481260 FAM60AQ9NP50 221 aa11.05□□□□□ -0.64
RAPGEF1-207ENST00000481260 ANAPC5Q9UJX4 755 aa11.05□□□□□ -0.64
RAPGEF1-207ENST00000481260 TMEM184BQ9Y519 407 aaPredicted RBP11.05□□□□□ -0.64
RAPGEF1-207ENST00000481260 HEBP2Q9Y5Z4 205 aa11.05□□□□□ -0.64
RAPGEF1-207ENST00000481260 TOX3O15405 576 aaPredicted RBP11.04□□□□□ -0.64
RAPGEF1-207ENST00000481260 NKX2-8O15522 239 aa11.04□□□□□ -0.64
RAPGEF1-207ENST00000481260 NRP2O60462 931 aa11.04□□□□□ -0.64
RAPGEF1-207ENST00000481260 HAUS5O94927 633 aa11.04□□□□□ -0.64
RAPGEF1-207ENST00000481260 CHRM5P08912 532 aaPredicted RBP11.04□□□□□ -0.64
RAPGEF1-207ENST00000481260 SPTBP11277 2137 aa11.04□□□□□ -0.64
RAPGEF1-207ENST00000481260 FGF5P12034 268 aa11.04□□□□□ -0.64
RAPGEF1-207ENST00000481260 RPS3P23396 243 aaKnown RBP eCLIP11.04□□□□□ -0.64
RAPGEF1-207ENST00000481260 NDUFS1P28331 727 aa11.04□□□□□ -0.64
RAPGEF1-207ENST00000481260 GABRB3P28472 473 aa11.04□□□□□ -0.64
RAPGEF1-207ENST00000481260 PKLRP30613 574 aa11.04□□□□□ -0.64
RAPGEF1-207ENST00000481260 RPL21P46778 160 aaKnown RBP11.04□□□□□ -0.64
RAPGEF1-207ENST00000481260 ITGA8P53708 1063 aa11.04□□□□□ -0.64
RAPGEF1-207ENST00000481260 DR1Q01658 176 aa11.04□□□□□ -0.64
RAPGEF1-207ENST00000481260 CUL1Q13616 776 aa11.04□□□□□ -0.64
RAPGEF1-207ENST00000481260 LY6DQ14210 128 aa11.04□□□□□ -0.64
RAPGEF1-207ENST00000481260 GBX1Q14549 363 aa11.04□□□□□ -0.64
RAPGEF1-207ENST00000481260 CRYMQ14894 314 aa11.04□□□□□ -0.64
RAPGEF1-207ENST00000481260 FASTKD3Q14CZ7 662 aaKnown RBP11.04□□□□□ -0.64
RAPGEF1-207ENST00000481260 TRADDQ15628 312 aa11.04□□□□□ -0.64
RAPGEF1-207ENST00000481260 LINC00303Q3SY05 128 aa11.04□□□□□ -0.64
RAPGEF1-207ENST00000481260 HSP90AA5PQ58FG0 334 aa11.04□□□□□ -0.64
RAPGEF1-207ENST00000481260 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.04□□□□□ -0.64
RAPGEF1-207ENST00000481260 AARS2Q5JTZ9 985 aaKnown RBP11.04□□□□□ -0.64
RAPGEF1-207ENST00000481260 ARMC6Q6NXE6 501 aa11.04□□□□□ -0.64
RAPGEF1-207ENST00000481260 FAM199XQ6PEV8 388 aaPredicted RBP11.04□□□□□ -0.64
RAPGEF1-207ENST00000481260 TRMT10BQ6PF06 316 aaKnown RBP11.04□□□□□ -0.64
RAPGEF1-207ENST00000481260 CNSTQ6PJW8 725 aa11.04□□□□□ -0.64
RAPGEF1-207ENST00000481260 CDHR3Q6ZTQ4 885 aa11.04□□□□□ -0.64
RAPGEF1-207ENST00000481260 RASGRP3Q8IV61 690 aa11.04□□□□□ -0.64
RAPGEF1-207ENST00000481260 D2HGDHQ8N465 521 aa11.04□□□□□ -0.64
RAPGEF1-207ENST00000481260 OR1L3Q8NH93 324 aa11.04□□□□□ -0.64
RAPGEF1-207ENST00000481260 OR5K2Q8NHB8 316 aa11.04□□□□□ -0.64
RAPGEF1-207ENST00000481260 SNRNP27Q8WVK2 155 aaKnown RBP11.04□□□□□ -0.64
RAPGEF1-207ENST00000481260 ZFPM2Q8WW38 1151 aa11.04□□□□□ -0.64
RAPGEF1-207ENST00000481260 UBXN4Q92575 508 aa11.04□□□□□ -0.64
RAPGEF1-207ENST00000481260 EXTL1Q92935 676 aa11.04□□□□□ -0.64
RAPGEF1-207ENST00000481260 CFAP36Q96G28 342 aa11.04□□□□□ -0.64
RAPGEF1-207ENST00000481260 TRAPPC9Q96Q05 1148 aa11.04□□□□□ -0.64
RAPGEF1-207ENST00000481260 NDNQ99608 321 aa11.04□□□□□ -0.64
RAPGEF1-207ENST00000481260 ASPSCR1Q9BZE9 553 aa11.04□□□□□ -0.64
RAPGEF1-207ENST00000481260 B3GNT4Q9C0J1 378 aa11.04□□□□□ -0.64
RAPGEF1-207ENST00000481260 TWSG1Q9GZX9 223 aa11.04□□□□□ -0.64
RAPGEF1-207ENST00000481260 TRIT1Q9H3H1 467 aaKnown RBP11.04□□□□□ -0.64
RAPGEF1-207ENST00000481260 IARS2Q9NSE4 1012 aaKnown RBP11.04□□□□□ -0.64
RAPGEF1-207ENST00000481260 C20orf96Q9NUD7 363 aaPredicted RBP11.04□□□□□ -0.64
RAPGEF1-207ENST00000481260 LNPEPQ9UIQ6 1025 aa11.04□□□□□ -0.64
RAPGEF1-207ENST00000481260 GNPTGQ9UJJ9 305 aa11.04□□□□□ -0.64
RAPGEF1-207ENST00000481260 SNX24Q9Y343 169 aa11.04□□□□□ -0.64
RAPGEF1-207ENST00000481260 KIF2AO00139 706 aaPredicted RBP11.03□□□□□ -0.64
RAPGEF1-207ENST00000481260 TERTO14746 1132 aaKnown RBP11.03□□□□□ -0.64
RAPGEF1-207ENST00000481260 PIAS1O75925 651 aa11.03□□□□□ -0.64
RAPGEF1-207ENST00000481260 GSTM1P09488 218 aa11.03□□□□□ -0.64
RAPGEF1-207ENST00000481260 FURINP09958 794 aa11.03□□□□□ -0.64
RAPGEF1-207ENST00000481260 ATXN8OSP0DMR3 200 aa11.03□□□□□ -0.64
RAPGEF1-207ENST00000481260 PRKAR1AP10644 381 aa11.03□□□□□ -0.64
RAPGEF1-207ENST00000481260 CDH3P22223 829 aa11.03□□□□□ -0.64
RAPGEF1-207ENST00000481260 CD82P27701 267 aa11.03□□□□□ -0.64
RAPGEF1-207ENST00000481260 PSMB5P28074 263 aa11.03□□□□□ -0.64
RAPGEF1-207ENST00000481260 CLCN7P51798 805 aa11.03□□□□□ -0.64
RAPGEF1-207ENST00000481260 FOXL2P58012 376 aa11.03□□□□□ -0.64
RAPGEF1-207ENST00000481260 HSD11B2P80365 405 aa11.03□□□□□ -0.64
RAPGEF1-207ENST00000481260 SARNPP82979 210 aaKnown RBP11.03□□□□□ -0.64
RAPGEF1-207ENST00000481260 GSTM4Q03013 218 aa11.03□□□□□ -0.64
RAPGEF1-207ENST00000481260 FASTKQ14296 549 aaKnown RBP11.03□□□□□ -0.64
RAPGEF1-207ENST00000481260 KYNUQ16719 465 aa11.03□□□□□ -0.64
RAPGEF1-207ENST00000481260 MRNIPQ6NTE8 343 aa11.03□□□□□ -0.64
RAPGEF1-207ENST00000481260 HIBCHQ6NVY1 386 aaPredicted RBP11.03□□□□□ -0.64
RAPGEF1-207ENST00000481260 KLHL35Q6PF15 583 aa11.03□□□□□ -0.64
RAPGEF1-207ENST00000481260 SPESP1Q6UW49 350 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms