RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 LINGO4Q6UY18 593 aa13.05□□□□□ -0.32
PDZRN3-208ENST00000479530 DET1Q7L5Y6 550 aa13.05□□□□□ -0.32
PDZRN3-208ENST00000479530 PAGE2Q7Z2X7 111 aa13.05□□□□□ -0.32
PDZRN3-208ENST00000479530 B3GNT8Q7Z7M8 397 aa13.05□□□□□ -0.32
PDZRN3-208ENST00000479530 DCP2Q8IU60 420 aaKnown RBP13.05□□□□□ -0.32
PDZRN3-208ENST00000479530 MSRB3Q8IXL7 192 aa13.05□□□□□ -0.32
PDZRN3-208ENST00000479530 RAVER1Q8IY67 606 aaKnown RBP13.05□□□□□ -0.32
PDZRN3-208ENST00000479530 SIDT2Q8NBJ9 832 aaKnown RBP13.05□□□□□ -0.32
PDZRN3-208ENST00000479530 S100ZQ8WXG8 99 aa13.05□□□□□ -0.32
PDZRN3-208ENST00000479530 RORBQ92753 470 aa13.05□□□□□ -0.32
PDZRN3-208ENST00000479530 RMDN1Q96DB5 314 aa13.05□□□□□ -0.32
PDZRN3-208ENST00000479530 RDH12Q96NR8 316 aa13.05□□□□□ -0.32
PDZRN3-208ENST00000479530 ZNF300Q96RE9 604 aaPredicted RBP13.05□□□□□ -0.32
PDZRN3-208ENST00000479530 ARPC5LQ9BPX5 153 aa13.05□□□□□ -0.32
PDZRN3-208ENST00000479530 NUSAP1Q9BXS6 441 aaKnown RBP13.05□□□□□ -0.32
PDZRN3-208ENST00000479530 UGT2B28Q9BY64 529 aa13.05□□□□□ -0.32
PDZRN3-208ENST00000479530 SLIRPQ9GZT3 109 aaKnown RBP13.05□□□□□ -0.32
PDZRN3-208ENST00000479530 TLR8Q9NR97 1041 aaKnown RBP13.05□□□□□ -0.32
PDZRN3-208ENST00000479530 SLC6A13Q9NSD5 602 aa13.05□□□□□ -0.32
PDZRN3-208ENST00000479530 ZNF229Q9UJW7 825 aa13.05□□□□□ -0.32
PDZRN3-208ENST00000479530 A6NL46 340 aa13.05□□□□□ -0.32
PDZRN3-208ENST00000479530 NIPSNAP2O75323 286 aa13.05□□□□□ -0.32
PDZRN3-208ENST00000479530 KATNA1O75449 491 aa13.05□□□□□ -0.32
PDZRN3-208ENST00000479530 TSPAN12O95859 305 aa13.05□□□□□ -0.32
PDZRN3-208ENST00000479530 CAPN1P07384 714 aa13.05□□□□□ -0.32
PDZRN3-208ENST00000479530 CNPP09543 421 aaKnown RBP13.05□□□□□ -0.32
PDZRN3-208ENST00000479530 ITGB6P18564 788 aa13.05□□□□□ -0.32
PDZRN3-208ENST00000479530 ATF6P18850 670 aa13.05□□□□□ -0.32
PDZRN3-208ENST00000479530 MAGP20916 626 aa13.05□□□□□ -0.32
PDZRN3-208ENST00000479530 PSMB9P28065 219 aa13.05□□□□□ -0.32
PDZRN3-208ENST00000479530 PWP1Q13610 501 aa13.05□□□□□ -0.32
PDZRN3-208ENST00000479530 MRPL58Q14197 206 aaKnown RBP13.05□□□□□ -0.32
PDZRN3-208ENST00000479530 NPTX1Q15818 432 aa13.05□□□□□ -0.32
PDZRN3-208ENST00000479530 TCTN1Q2MV58 587 aa13.05□□□□□ -0.32
PDZRN3-208ENST00000479530 PARP15Q460N3 678 aa13.05□□□□□ -0.32
PDZRN3-208ENST00000479530 PSAPL1Q6NUJ1 521 aa13.05□□□□□ -0.32
PDZRN3-208ENST00000479530 CHPFQ8IZ52 775 aa13.05□□□□□ -0.32
PDZRN3-208ENST00000479530 SLC22A15Q8IZD6 547 aa13.05□□□□□ -0.32
PDZRN3-208ENST00000479530 GPR150Q8NGU9 434 aa13.05□□□□□ -0.32
PDZRN3-208ENST00000479530 BCL7CQ8WUZ0 217 aaPredicted RBP13.05□□□□□ -0.32
PDZRN3-208ENST00000479530 YIPF6Q96EC8 236 aa13.05□□□□□ -0.32
PDZRN3-208ENST00000479530 DHRS1Q96LJ7 313 aa13.05□□□□□ -0.32
PDZRN3-208ENST00000479530 MYOCQ99972 504 aa13.05□□□□□ -0.32
PDZRN3-208ENST00000479530 GORASP2Q9H8Y8 452 aa13.05□□□□□ -0.32
PDZRN3-208ENST00000479530 ABCB10Q9NRK6 738 aa13.05□□□□□ -0.32
PDZRN3-208ENST00000479530 MARCH5Q9NX47 278 aa13.05□□□□□ -0.32
PDZRN3-208ENST00000479530 SLC25A37Q9NYZ2 338 aa13.05□□□□□ -0.32
PDZRN3-208ENST00000479530 USE1Q9NZ43 259 aa13.05□□□□□ -0.32
PDZRN3-208ENST00000479530 PCDHB14Q9Y5E9 798 aa13.05□□□□□ -0.32
PDZRN3-208ENST00000479530 PATJQ8NI35 1801 aa13.05□□□□□ -0.32
PDZRN3-208ENST00000479530 H3BNC9 293 aa13.04□□□□□ -0.32
PDZRN3-208ENST00000479530 ARVCFO00192 962 aa13.04□□□□□ -0.32
PDZRN3-208ENST00000479530 BCKDKO14874 412 aa13.04□□□□□ -0.32
PDZRN3-208ENST00000479530 SLC22A1O15245 554 aa13.04□□□□□ -0.32
PDZRN3-208ENST00000479530 PRAMEF12O95522 483 aa13.04□□□□□ -0.32
PDZRN3-208ENST00000479530 FADS2O95864 444 aaKnown RBP13.04□□□□□ -0.32
PDZRN3-208ENST00000479530 NPPAP01160 153 aa13.04□□□□□ -0.32
PDZRN3-208ENST00000479530 SERPINF2P08697 491 aa13.04□□□□□ -0.32
PDZRN3-208ENST00000479530 CD40LGP29965 261 aa13.04□□□□□ -0.32
PDZRN3-208ENST00000479530 NR4A2P43354 598 aa13.04□□□□□ -0.32
PDZRN3-208ENST00000479530 SEPHS1P49903 392 aa13.04□□□□□ -0.32
PDZRN3-208ENST00000479530 ACLYP53396 1101 aa13.04□□□□□ -0.32
PDZRN3-208ENST00000479530 FAM189BP81408 668 aa13.04□□□□□ -0.32
PDZRN3-208ENST00000479530 NR6A1Q15406 480 aa13.04□□□□□ -0.32
PDZRN3-208ENST00000479530 C16orf59Q7L2K0 433 aa13.04□□□□□ -0.32
PDZRN3-208ENST00000479530 P2RY8Q86VZ1 359 aa13.04□□□□□ -0.32
PDZRN3-208ENST00000479530 CYP4Z1Q86W10 505 aa13.04□□□□□ -0.32
PDZRN3-208ENST00000479530 DENND1CQ8IV53 801 aa13.04□□□□□ -0.32
PDZRN3-208ENST00000479530 EEF1AKMT1Q8WVE0 214 aa13.04□□□□□ -0.32
PDZRN3-208ENST00000479530 FATE1Q969F0 183 aa13.04□□□□□ -0.32
PDZRN3-208ENST00000479530 POPDC3Q9HBV1 291 aa13.04□□□□□ -0.32
PDZRN3-208ENST00000479530 MAGEE1Q9HCI5 957 aa13.04□□□□□ -0.32
PDZRN3-208ENST00000479530 TAS2R13Q9NYV9 303 aa13.04□□□□□ -0.32
PDZRN3-208ENST00000479530 FNIP2Q9P278 1114 aa13.04□□□□□ -0.32
PDZRN3-208ENST00000479530 VWA8A3KMH1 1905 aa13.04□□□□□ -0.32
PDZRN3-208ENST00000479530 PSMD11O00231 422 aa13.04□□□□□ -0.32
PDZRN3-208ENST00000479530 LSM1O15116 133 aaKnown RBP13.04□□□□□ -0.32
PDZRN3-208ENST00000479530 EOMESO95936 686 aa13.04□□□□□ -0.32
PDZRN3-208ENST00000479530 FGF1P05230 155 aa13.04□□□□□ -0.32
PDZRN3-208ENST00000479530 PIK3CGP48736 1102 aa13.04□□□□□ -0.32
PDZRN3-208ENST00000479530 SLC11A1P49279 550 aa13.04□□□□□ -0.32
PDZRN3-208ENST00000479530 PCYT1AP49585 367 aa13.04□□□□□ -0.32
PDZRN3-208ENST00000479530 FCGRTP55899 365 aa13.04□□□□□ -0.32
PDZRN3-208ENST00000479530 IL1RL1Q01638 556 aa13.04□□□□□ -0.32
PDZRN3-208ENST00000479530 RAD51Q06609 339 aa13.04□□□□□ -0.32
PDZRN3-208ENST00000479530 GPNMBQ14956 572 aa13.04□□□□□ -0.32
PDZRN3-208ENST00000479530 ABRAXAS2Q15018 415 aa13.04□□□□□ -0.32
PDZRN3-208ENST00000479530 KIAA0040Q15053 153 aa13.04□□□□□ -0.32
PDZRN3-208ENST00000479530 PTPRNQ16849 979 aa13.04□□□□□ -0.32
PDZRN3-208ENST00000479530 DGUOKQ16854 277 aa13.04□□□□□ -0.32
PDZRN3-208ENST00000479530 CLIP4Q8N3C7 705 aa13.04□□□□□ -0.32
PDZRN3-208ENST00000479530 OR56A4Q8NGH8 313 aa13.04□□□□□ -0.32
PDZRN3-208ENST00000479530 METTL6Q8TCB7 284 aa13.04□□□□□ -0.32
PDZRN3-208ENST00000479530 UBE2FQ969M7 185 aa13.04□□□□□ -0.32
PDZRN3-208ENST00000479530 FAM162AQ96A26 154 aa13.04□□□□□ -0.32
PDZRN3-208ENST00000479530 CTRCQ99895 268 aa13.04□□□□□ -0.32
PDZRN3-208ENST00000479530 TPK1Q9H3S4 243 aa13.04□□□□□ -0.32
PDZRN3-208ENST00000479530 SYTL2Q9HCH5 934 aa13.04□□□□□ -0.32
PDZRN3-208ENST00000479530 HEBP1Q9NRV9 189 aa13.04□□□□□ -0.32
PDZRN3-208ENST00000479530 C3orf18Q9UK00 162 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms