RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 CDK20Q8IZL9 346 aa14.07□□□□□ -0.16
COL20A1-206ENST00000479501 DEPDC4Q8N2C3 294 aa14.07□□□□□ -0.16
COL20A1-206ENST00000479501 VPS35Q96QK1 796 aa14.07□□□□□ -0.16
COL20A1-206ENST00000479501 FERD3LQ96RJ6 166 aa14.07□□□□□ -0.16
COL20A1-206ENST00000479501 GIMAP2Q9UG22 337 aa14.07□□□□□ -0.16
COL20A1-206ENST00000479501 A0A088AWK7 358 aa14.06□□□□□ -0.16
COL20A1-206ENST00000479501 ISM1B1AKI9 464 aa14.06□□□□□ -0.16
COL20A1-206ENST00000479501 STX11O75558 287 aa14.06□□□□□ -0.16
COL20A1-206ENST00000479501 ZNF10P21506 573 aaPredicted RBP14.06□□□□□ -0.16
COL20A1-206ENST00000479501 RHDQ02161 417 aa14.06□□□□□ -0.16
COL20A1-206ENST00000479501 C2orf80Q0P641 193 aa14.06□□□□□ -0.16
COL20A1-206ENST00000479501 PPIGQ13427 754 aaKnown RBP eCLIP14.06□□□□□ -0.16
COL20A1-206ENST00000479501 CDC73Q6P1J9 531 aa14.06□□□□□ -0.16
COL20A1-206ENST00000479501 ALKAL1Q6UXT8 129 aa14.06□□□□□ -0.16
COL20A1-206ENST00000479501 GDPD4Q6W3E5 623 aa14.06□□□□□ -0.16
COL20A1-206ENST00000479501 PAQR9Q6ZVX9 377 aa14.06□□□□□ -0.16
COL20A1-206ENST00000479501 COLGALT2Q8IYK4 626 aa14.06□□□□□ -0.16
COL20A1-206ENST00000479501 NSMCE3Q96MG7 304 aa14.06□□□□□ -0.16
COL20A1-206ENST00000479501 RANBP9Q96S59 729 aa14.06□□□□□ -0.16
COL20A1-206ENST00000479501 RBM4BQ9BQ04 359 aaKnown RBP14.06□□□□□ -0.16
COL20A1-206ENST00000479501 AIF1LQ9BQI0 150 aa14.06□□□□□ -0.16
COL20A1-206ENST00000479501 RBM4Q9BWF3 364 aaKnown RBP14.06□□□□□ -0.16
COL20A1-206ENST00000479501 EBPLQ9BY08 206 aa14.06□□□□□ -0.16
COL20A1-206ENST00000479501 ZIM2Q9NZV7 527 aa14.06□□□□□ -0.16
COL20A1-206ENST00000479501 GPC6Q9Y625 555 aaPredicted RBP14.06□□□□□ -0.16
COL20A1-206ENST00000479501 LAMB2P55268 1798 aa14.06□□□□□ -0.16
COL20A1-206ENST00000479501 ZNF840PA6NDX5 716 aa14.06□□□□□ -0.16
COL20A1-206ENST00000479501 CYP7B1O75881 506 aa14.06□□□□□ -0.16
COL20A1-206ENST00000479501 BCAS2O75934 225 aaPredicted RBP14.06□□□□□ -0.16
COL20A1-206ENST00000479501 SPIBQ01892 262 aa14.06□□□□□ -0.16
COL20A1-206ENST00000479501 PLA2G4EQ3MJ16 856 aa14.06□□□□□ -0.16
COL20A1-206ENST00000479501 CGB2Q6NT52 195 aa14.06□□□□□ -0.16
COL20A1-206ENST00000479501 VN1R5Q7Z5H4 357 aa14.06□□□□□ -0.16
COL20A1-206ENST00000479501 C10orf53Q8N6V4 93 aa14.06□□□□□ -0.16
COL20A1-206ENST00000479501 BEND7Q8N7W2 519 aaPredicted RBP14.06□□□□□ -0.16
COL20A1-206ENST00000479501 PDPRQ8NCN5 879 aa14.06□□□□□ -0.16
COL20A1-206ENST00000479501 USP7Q93009 1102 aa14.06□□□□□ -0.16
COL20A1-206ENST00000479501 MTERF1Q99551 399 aaKnown RBP14.06□□□□□ -0.16
COL20A1-206ENST00000479501 KLHL31Q9H511 634 aa14.06□□□□□ -0.16
COL20A1-206ENST00000479501 NSUN3Q9H649 340 aaKnown RBP14.06□□□□□ -0.16
COL20A1-206ENST00000479501 MRPS7Q9Y2R9 242 aaKnown RBP14.06□□□□□ -0.16
COL20A1-206ENST00000479501 SCN9AQ15858 1988 aa14.06□□□□□ -0.16
COL20A1-206ENST00000479501 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.06□□□□□ -0.16
COL20A1-206ENST00000479501 STX16O14662 325 aa14.06□□□□□ -0.16
COL20A1-206ENST00000479501 INPPL1O15357 1258 aa14.06□□□□□ -0.16
COL20A1-206ENST00000479501 MTX2O75431 263 aa14.06□□□□□ -0.16
COL20A1-206ENST00000479501 CLTBP09497 229 aa14.06□□□□□ -0.16
COL20A1-206ENST00000479501 HPGDP15428 266 aa14.06□□□□□ -0.16
COL20A1-206ENST00000479501 IFNGR2P38484 337 aa14.06□□□□□ -0.16
COL20A1-206ENST00000479501 WASP42768 502 aa14.06□□□□□ -0.16
COL20A1-206ENST00000479501 RPL26P61254 145 aaKnown RBP14.06□□□□□ -0.16
COL20A1-206ENST00000479501 SIM2Q14190 667 aaPredicted RBP14.06□□□□□ -0.16
COL20A1-206ENST00000479501 MED22Q15528 200 aa14.06□□□□□ -0.16
COL20A1-206ENST00000479501 Q6ZVU0 165 aa14.06□□□□□ -0.16
COL20A1-206ENST00000479501 ZNF438Q7Z4V0 828 aa14.06□□□□□ -0.16
COL20A1-206ENST00000479501 TTC9BQ8N6N2 239 aa14.06□□□□□ -0.16
COL20A1-206ENST00000479501 OR4F6Q8NGB9 312 aa14.06□□□□□ -0.16
COL20A1-206ENST00000479501 TOP1MTQ969P6 601 aa14.06□□□□□ -0.16
COL20A1-206ENST00000479501 CXorf40BQ96DE9 158 aa14.06□□□□□ -0.16
COL20A1-206ENST00000479501 PHPT1Q9NRX4 125 aaPredicted RBP14.06□□□□□ -0.16
COL20A1-206ENST00000479501 RUVBL1Q9Y265 456 aaKnown RBP14.06□□□□□ -0.16
COL20A1-206ENST00000479501 A0A1W2PP18 115 aa14.05□□□□□ -0.16
COL20A1-206ENST00000479501 GDF5P43026 501 aa14.05□□□□□ -0.16
COL20A1-206ENST00000479501 NFKB2Q00653 900 aa14.05□□□□□ -0.16
COL20A1-206ENST00000479501 PPP1R3AQ16821 1122 aa14.05□□□□□ -0.16
COL20A1-206ENST00000479501 MYLK3Q32MK0 819 aa14.05□□□□□ -0.16
COL20A1-206ENST00000479501 CAMKK1Q8N5S9 505 aa14.05□□□□□ -0.16
COL20A1-206ENST00000479501 KCNN1Q92952 543 aa14.05□□□□□ -0.16
COL20A1-206ENST00000479501 CREBZFQ9NS37 354 aa14.05□□□□□ -0.16
COL20A1-206ENST00000479501 CLN6Q9NWW5 311 aa14.05□□□□□ -0.16
COL20A1-206ENST00000479501 CXCR6O00574 342 aa14.05□□□□□ -0.16
COL20A1-206ENST00000479501 T-ENOLP0DO92 83 aa14.05□□□□□ -0.16
COL20A1-206ENST00000479501 SSR2P43308 183 aa14.05□□□□□ -0.16
COL20A1-206ENST00000479501 CENPAP49450 140 aa14.05□□□□□ -0.16
COL20A1-206ENST00000479501 GSK3BP49841 420 aa14.05□□□□□ -0.16
COL20A1-206ENST00000479501 DGKQP52824 942 aa14.05□□□□□ -0.16
COL20A1-206ENST00000479501 TPTEP56180 551 aa14.05□□□□□ -0.16
COL20A1-206ENST00000479501 BNC1Q01954 994 aa14.05□□□□□ -0.16
COL20A1-206ENST00000479501 SRSF11Q05519 484 aaKnown RBP14.05□□□□□ -0.16
COL20A1-206ENST00000479501 PYDC2Q56P42 97 aa14.05□□□□□ -0.16
COL20A1-206ENST00000479501 TNFAIP8L3Q5GJ75 292 aa14.05□□□□□ -0.16
COL20A1-206ENST00000479501 PLET1Q6UQ28 207 aa14.05□□□□□ -0.16
COL20A1-206ENST00000479501 ERI1Q8IV48 349 aaKnown RBP14.05□□□□□ -0.16
COL20A1-206ENST00000479501 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.05□□□□□ -0.16
COL20A1-206ENST00000479501 CGREF1Q99674 301 aa14.05□□□□□ -0.16
COL20A1-206ENST00000479501 PKP2Q99959 881 aa14.05□□□□□ -0.16
COL20A1-206ENST00000479501 HTATIP2Q9BUP3 242 aa14.05□□□□□ -0.16
COL20A1-206ENST00000479501 SLC32A1Q9H598 525 aa14.05□□□□□ -0.16
COL20A1-206ENST00000479501 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.05□□□□□ -0.16
COL20A1-206ENST00000479501 STX4Q12846 297 aa14.05□□□□□ -0.16
COL20A1-206ENST00000479501 DLG1Q12959 904 aa14.05□□□□□ -0.16
COL20A1-206ENST00000479501 KIAA1324Q6UXG2 1013 aaKnown RBP14.05□□□□□ -0.16
COL20A1-206ENST00000479501 CYP2U1Q7Z449 544 aa14.05□□□□□ -0.16
COL20A1-206ENST00000479501 AHI1Q8N157 1196 aa14.05□□□□□ -0.16
COL20A1-206ENST00000479501 C11orf65Q8NCR3 313 aa14.05□□□□□ -0.16
COL20A1-206ENST00000479501 TAMM41Q96BW9 452 aa14.05□□□□□ -0.16
COL20A1-206ENST00000479501 SPATA5L1Q9BVQ7 753 aa14.05□□□□□ -0.16
COL20A1-206ENST00000479501 RETREG1Q9H6L5 497 aa14.05□□□□□ -0.16
COL20A1-206ENST00000479501 CCDC177Q9NQR7 707 aaPredicted RBP14.05□□□□□ -0.16
COL20A1-206ENST00000479501 ZNF221Q9UK13 617 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms