RNA–Protein interactions for RNA: ENST00000479339.5

CNKSR3-204, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best) BASIC

Gene CNKSR3, Length 2,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-204ENST00000479339 MAP3K6O95382 1288 aa12.91□□□□□ -0.34
CNKSR3-204ENST00000479339 CXCL14O95715 111 aa12.91□□□□□ -0.34
CNKSR3-204ENST00000479339 POMCP01189 267 aa12.91□□□□□ -0.34
CNKSR3-204ENST00000479339 PRLP01236 227 aa12.91□□□□□ -0.34
CNKSR3-204ENST00000479339 ITGAMP11215 1152 aa12.91□□□□□ -0.34
CNKSR3-204ENST00000479339 CD36P16671 472 aa12.91□□□□□ -0.34
CNKSR3-204ENST00000479339 CAPN3P20807 821 aa12.91□□□□□ -0.34
CNKSR3-204ENST00000479339 TGFBR2P37173 567 aa12.91□□□□□ -0.34
CNKSR3-204ENST00000479339 SLC26A3P40879 764 aa12.91□□□□□ -0.34
CNKSR3-204ENST00000479339 GLRBP48167 497 aa12.91□□□□□ -0.34
CNKSR3-204ENST00000479339 GBE1Q04446 702 aa12.91□□□□□ -0.34
CNKSR3-204ENST00000479339 DSC1Q08554 894 aa12.91□□□□□ -0.34
CNKSR3-204ENST00000479339 RIPPLY1Q0D2K3 151 aa12.91□□□□□ -0.34
CNKSR3-204ENST00000479339 KCNAB2Q13303 367 aa12.91□□□□□ -0.34
CNKSR3-204ENST00000479339 CDK5R2Q13319 367 aa12.91□□□□□ -0.34
CNKSR3-204ENST00000479339 TNK1Q13470 666 aa12.91□□□□□ -0.34
CNKSR3-204ENST00000479339 GRM3Q14832 879 aa12.91□□□□□ -0.34
CNKSR3-204ENST00000479339 PXDC1Q5TGL8 231 aa12.91□□□□□ -0.34
CNKSR3-204ENST00000479339 NXNL2Q5VZ03 156 aa12.91□□□□□ -0.34
CNKSR3-204ENST00000479339 BSPRYQ5W0U4 402 aa12.91□□□□□ -0.34
CNKSR3-204ENST00000479339 CES5AQ6NT32 575 aa12.91□□□□□ -0.34
CNKSR3-204ENST00000479339 ANKRD54Q6NXT1 300 aa12.91□□□□□ -0.34
CNKSR3-204ENST00000479339 LURAP1LQ8IV03 231 aa12.91□□□□□ -0.34
CNKSR3-204ENST00000479339 SLC22A15Q8IZD6 547 aa12.91□□□□□ -0.34
CNKSR3-204ENST00000479339 AGAP2Q99490 1192 aa12.91□□□□□ -0.34
CNKSR3-204ENST00000479339 SEPHS2Q99611 448 aa12.91□□□□□ -0.34
CNKSR3-204ENST00000479339 SNRNP25Q9BV90 132 aaKnown RBP12.91□□□□□ -0.34
CNKSR3-204ENST00000479339 VN1R3Q9BXE9 311 aa12.91□□□□□ -0.34
CNKSR3-204ENST00000479339 SMOC2Q9H3U7 446 aa12.91□□□□□ -0.34
CNKSR3-204ENST00000479339 NXF3Q9H4D5 531 aaKnown RBP12.91□□□□□ -0.34
CNKSR3-204ENST00000479339 EPHX3Q9H6B9 360 aa12.91□□□□□ -0.34
CNKSR3-204ENST00000479339 POLR3BQ9NW08 1133 aaPredicted RBP12.91□□□□□ -0.34
CNKSR3-204ENST00000479339 DNAJB9Q9UBS3 223 aa12.91□□□□□ -0.34
CNKSR3-204ENST00000479339 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.91□□□□□ -0.34
CNKSR3-204ENST00000479339 MAGED2Q9UNF1 606 aaPredicted RBP12.91□□□□□ -0.34
CNKSR3-204ENST00000479339 CFL2Q9Y281 166 aa12.91□□□□□ -0.34
CNKSR3-204ENST00000479339 LYVE1Q9Y5Y7 322 aa12.91□□□□□ -0.34
CNKSR3-204ENST00000479339 XIRP2A4UGR9 3374 aa12.91□□□□□ -0.34
CNKSR3-204ENST00000479339 A0A087X1B8 175 aa12.9□□□□□ -0.34
CNKSR3-204ENST00000479339 ACKR2O00590 384 aa12.9□□□□□ -0.34
CNKSR3-204ENST00000479339 PRKCBP05771 671 aa12.9□□□□□ -0.34
CNKSR3-204ENST00000479339 TCF3P15923 654 aa12.9□□□□□ -0.34
CNKSR3-204ENST00000479339 EFNA5P52803 228 aa12.9□□□□□ -0.34
CNKSR3-204ENST00000479339 POU6F2P78424 691 aaPredicted RBP12.9□□□□□ -0.34
CNKSR3-204ENST00000479339 CAPRIN1Q14444 709 aaKnown RBP12.9□□□□□ -0.34
CNKSR3-204ENST00000479339 DPYSL2Q16555 572 aa12.9□□□□□ -0.34
CNKSR3-204ENST00000479339 PYCR3Q53H96 274 aa12.9□□□□□ -0.34
CNKSR3-204ENST00000479339 CES3Q6UWW8 571 aa12.9□□□□□ -0.34
CNKSR3-204ENST00000479339 DPY19L3Q6ZPD9 716 aa12.9□□□□□ -0.34
CNKSR3-204ENST00000479339 TXNDC5Q8NBS9 432 aaKnown RBP12.9□□□□□ -0.34
CNKSR3-204ENST00000479339 FLCNQ8NFG4 579 aa12.9□□□□□ -0.34
CNKSR3-204ENST00000479339 OR10Z1Q8NGY1 313 aa12.9□□□□□ -0.34
CNKSR3-204ENST00000479339 SUSD6Q92537 303 aa12.9□□□□□ -0.34
CNKSR3-204ENST00000479339 GPR78Q96P69 363 aa12.9□□□□□ -0.34
CNKSR3-204ENST00000479339 TM9SF2Q99805 663 aa12.9□□□□□ -0.34
CNKSR3-204ENST00000479339 MSTO1Q9BUK6 570 aa12.9□□□□□ -0.34
CNKSR3-204ENST00000479339 S1PR5Q9H228 398 aa12.9□□□□□ -0.34
CNKSR3-204ENST00000479339 ACOT13Q9NPJ3 140 aa12.9□□□□□ -0.34
CNKSR3-204ENST00000479339 MIOSQ9NXC5 875 aa12.9□□□□□ -0.34
CNKSR3-204ENST00000479339 MAT2BQ9NZL9 334 aa12.9□□□□□ -0.34
CNKSR3-204ENST00000479339 USP22Q9UPT9 525 aa12.9□□□□□ -0.34
CNKSR3-204ENST00000479339 FIS1Q9Y3D6 152 aa12.9□□□□□ -0.34
CNKSR3-204ENST00000479339 ORC6Q9Y5N6 252 aa12.9□□□□□ -0.34
CNKSR3-204ENST00000479339 MEIOCA2RUB1 952 aa12.89□□□□□ -0.35
CNKSR3-204ENST00000479339 RGS10O43665 173 aa12.89□□□□□ -0.35
CNKSR3-204ENST00000479339 NPPAP01160 153 aa12.89□□□□□ -0.35
CNKSR3-204ENST00000479339 HOXB8P17481 243 aaPredicted RBP12.89□□□□□ -0.35
CNKSR3-204ENST00000479339 MAGP20916 626 aa12.89□□□□□ -0.35
CNKSR3-204ENST00000479339 CD6P30203 668 aa12.89□□□□□ -0.35
CNKSR3-204ENST00000479339 FMO4P31512 558 aa12.89□□□□□ -0.35
CNKSR3-204ENST00000479339 MAGEA11P43364 429 aa12.89□□□□□ -0.35
CNKSR3-204ENST00000479339 ETV1P50549 477 aa12.89□□□□□ -0.35
CNKSR3-204ENST00000479339 RAB10P61026 200 aa12.89□□□□□ -0.35
CNKSR3-204ENST00000479339 CHRNB3Q05901 458 aa12.89□□□□□ -0.35
CNKSR3-204ENST00000479339 FAPQ12884 760 aa12.89□□□□□ -0.35
CNKSR3-204ENST00000479339 ACAP2Q15057 778 aa12.89□□□□□ -0.35
CNKSR3-204ENST00000479339 DDR2Q16832 855 aa12.89□□□□□ -0.35
CNKSR3-204ENST00000479339 VPS26BQ4G0F5 336 aa12.89□□□□□ -0.35
CNKSR3-204ENST00000479339 SDE2Q6IQ49 451 aa12.89□□□□□ -0.35
CNKSR3-204ENST00000479339 UTS2BQ765I0 119 aa12.89□□□□□ -0.35
CNKSR3-204ENST00000479339 MICU2Q8IYU8 434 aa12.89□□□□□ -0.35
CNKSR3-204ENST00000479339 AADATQ8N5Z0 425 aa12.89□□□□□ -0.35
CNKSR3-204ENST00000479339 PAF1Q8N7H5 531 aa12.89□□□□□ -0.35
CNKSR3-204ENST00000479339 OR10T2Q8NGX3 314 aa12.89□□□□□ -0.35
CNKSR3-204ENST00000479339 IPCEF1Q8WWN9 437 aaPredicted RBP12.89□□□□□ -0.35
CNKSR3-204ENST00000479339 SH3KBP1Q96B97 665 aa12.89□□□□□ -0.35
CNKSR3-204ENST00000479339 C19orf60Q96EN9 201 aa12.89□□□□□ -0.35
CNKSR3-204ENST00000479339 ITPAQ9BY32 194 aa12.89□□□□□ -0.35
CNKSR3-204ENST00000479339 ROGDIQ9GZN7 287 aa12.89□□□□□ -0.35
CNKSR3-204ENST00000479339 GLTPQ9NZD2 209 aa12.89□□□□□ -0.35
CNKSR3-204ENST00000479339 ERVK-18Q9QC07 812 aa12.89□□□□□ -0.35
CNKSR3-204ENST00000479339 KLHL21Q9UJP4 597 aa12.89□□□□□ -0.35
CNKSR3-204ENST00000479339 ERVW-1Q9UQF0 538 aa12.89□□□□□ -0.35
CNKSR3-204ENST00000479339 TLR6Q9Y2C9 796 aa12.89□□□□□ -0.35
CNKSR3-204ENST00000479339 AP3M1Q9Y2T2 418 aa12.89□□□□□ -0.35
CNKSR3-204ENST00000479339 ATP6AP2A0A1C7CYW4 349 aa12.89□□□□□ -0.35
CNKSR3-204ENST00000479339 OR2A25A4D2G3 310 aa12.89□□□□□ -0.35
CNKSR3-204ENST00000479339 AIREO43918 545 aa12.89□□□□□ -0.35
CNKSR3-204ENST00000479339 CPNE3O75131 537 aaKnown RBP12.89□□□□□ -0.35
CNKSR3-204ENST00000479339 PDGFAP04085 211 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms