RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 LOC730098B7Z3J9 87 aa13.94□□□□□ -0.18
NPHP4-208ENST00000478423 OR6B1O95007 311 aa13.94□□□□□ -0.18
NPHP4-208ENST00000478423 TGFB1P01137 390 aa13.94□□□□□ -0.18
NPHP4-208ENST00000478423 RHOP08100 348 aa13.94□□□□□ -0.18
NPHP4-208ENST00000478423 THRBP10828 461 aa13.94□□□□□ -0.18
NPHP4-208ENST00000478423 TCF3P15923 654 aa13.94□□□□□ -0.18
NPHP4-208ENST00000478423 AOC1P19801 751 aa13.94□□□□□ -0.18
NPHP4-208ENST00000478423 GSCP56915 257 aaPredicted RBP13.94□□□□□ -0.18
NPHP4-208ENST00000478423 ANGPT1Q15389 498 aa13.94□□□□□ -0.18
NPHP4-208ENST00000478423 CLLU1OSQ5K130 101 aa13.94□□□□□ -0.18
NPHP4-208ENST00000478423 DPY19L3Q6ZPD9 716 aa13.94□□□□□ -0.18
NPHP4-208ENST00000478423 NXPE1Q8N323 547 aa13.94□□□□□ -0.18
NPHP4-208ENST00000478423 AMER2Q8N7J2 671 aa13.94□□□□□ -0.18
NPHP4-208ENST00000478423 C19orf18Q8NEA5 215 aa13.94□□□□□ -0.18
NPHP4-208ENST00000478423 NAT14Q8WUY8 206 aa13.94□□□□□ -0.18
NPHP4-208ENST00000478423 CARS2Q9HA77 564 aaKnown RBP13.94□□□□□ -0.18
NPHP4-208ENST00000478423 BACE2Q9Y5Z0 518 aa13.94□□□□□ -0.18
NPHP4-208ENST00000478423 CXCR6O00574 342 aa13.94□□□□□ -0.18
NPHP4-208ENST00000478423 IFNW1P05000 195 aa13.94□□□□□ -0.18
NPHP4-208ENST00000478423 LYNP07948 512 aa13.94□□□□□ -0.18
NPHP4-208ENST00000478423 ITGAXP20702 1163 aa13.94□□□□□ -0.18
NPHP4-208ENST00000478423 DNAJB1P25685 340 aa13.94□□□□□ -0.18
NPHP4-208ENST00000478423 YAP1P46937 504 aaKnown RBP13.94□□□□□ -0.18
NPHP4-208ENST00000478423 TAS2R41P59536 307 aa13.94□□□□□ -0.18
NPHP4-208ENST00000478423 C1QTNF8P60827 252 aa13.94□□□□□ -0.18
NPHP4-208ENST00000478423 HERC3Q15034 1050 aa13.94□□□□□ -0.18
NPHP4-208ENST00000478423 FGD2Q7Z6J4 655 aa13.94□□□□□ -0.18
NPHP4-208ENST00000478423 TMCO2Q7Z6W1 182 aaPredicted RBP13.94□□□□□ -0.18
NPHP4-208ENST00000478423 POMGNT2Q8NAT1 580 aa13.94□□□□□ -0.18
NPHP4-208ENST00000478423 ZCCHC10Q8TBK6 192 aa13.94□□□□□ -0.18
NPHP4-208ENST00000478423 PCBD2Q9H0N5 130 aa13.94□□□□□ -0.18
NPHP4-208ENST00000478423 EPB41L1Q9H4G0 881 aa13.94□□□□□ -0.18
NPHP4-208ENST00000478423 CFAP20Q9Y6A4 193 aaKnown RBP13.94□□□□□ -0.18
NPHP4-208ENST00000478423 SLX4Q8IY92 1834 aa13.93□□□□□ -0.18
NPHP4-208ENST00000478423 GTPBP1O00178 669 aaKnown RBP13.93□□□□□ -0.18
NPHP4-208ENST00000478423 PCDH7O60245 1069 aa13.93□□□□□ -0.18
NPHP4-208ENST00000478423 UGT2B17O75795 530 aa13.93□□□□□ -0.18
NPHP4-208ENST00000478423 ALOX12P18054 663 aa13.93□□□□□ -0.18
NPHP4-208ENST00000478423 CCNFP41002 786 aa13.93□□□□□ -0.18
NPHP4-208ENST00000478423 CLCNKAP51800 687 aa13.93□□□□□ -0.18
NPHP4-208ENST00000478423 HTRA3P83110 453 aa13.93□□□□□ -0.18
NPHP4-208ENST00000478423 PM20D1Q6GTS8 502 aa13.93□□□□□ -0.18
NPHP4-208ENST00000478423 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.93□□□□□ -0.18
NPHP4-208ENST00000478423 KCNA7Q96RP8 456 aa13.93□□□□□ -0.18
NPHP4-208ENST00000478423 HMG20AQ9NP66 347 aa13.93□□□□□ -0.18
NPHP4-208ENST00000478423 C8orf4Q9NR00 106 aa13.93□□□□□ -0.18
NPHP4-208ENST00000478423 GIMAP2Q9UG22 337 aa13.93□□□□□ -0.18
NPHP4-208ENST00000478423 SLCO3A1Q9UIG8 710 aa13.93□□□□□ -0.18
NPHP4-208ENST00000478423 ADAM30Q9UKF2 790 aa13.93□□□□□ -0.18
NPHP4-208ENST00000478423 GSTK1Q9Y2Q3 226 aa13.93□□□□□ -0.18
NPHP4-208ENST00000478423 TULP3O75386 442 aa13.93□□□□□ -0.18
NPHP4-208ENST00000478423 PGLSO95336 258 aa13.93□□□□□ -0.18
NPHP4-208ENST00000478423 HIST1H2ABP04908 130 aa13.93□□□□□ -0.18
NPHP4-208ENST00000478423 CKMT2P17540 419 aa13.93□□□□□ -0.18
NPHP4-208ENST00000478423 PRPS1L1P21108 318 aa13.93□□□□□ -0.18
NPHP4-208ENST00000478423 NT5EP21589 574 aa13.93□□□□□ -0.18
NPHP4-208ENST00000478423 DCTN2Q13561 401 aaKnown RBP13.93□□□□□ -0.18
NPHP4-208ENST00000478423 PDZK1Q5T2W1 519 aa13.93□□□□□ -0.18
NPHP4-208ENST00000478423 IRAK1BP1Q5VVH5 260 aa13.93□□□□□ -0.18
NPHP4-208ENST00000478423 C6orf89Q6UWU4 347 aa13.93□□□□□ -0.18
NPHP4-208ENST00000478423 HIST3H2AQ7L7L0 130 aa13.93□□□□□ -0.18
NPHP4-208ENST00000478423 FAM129CQ86XR2 697 aa13.93□□□□□ -0.18
NPHP4-208ENST00000478423 HIST1H2ACQ93077 130 aa13.93□□□□□ -0.18
NPHP4-208ENST00000478423 LRRC58Q96CX6 371 aa13.93□□□□□ -0.18
NPHP4-208ENST00000478423 RBM4BQ9BQ04 359 aaKnown RBP13.93□□□□□ -0.18
NPHP4-208ENST00000478423 RBM4Q9BWF3 364 aaKnown RBP13.93□□□□□ -0.18
NPHP4-208ENST00000478423 MAT2BQ9NZL9 334 aa13.93□□□□□ -0.18
NPHP4-208ENST00000478423 DAPK2Q9UIK4 370 aa13.93□□□□□ -0.18
NPHP4-208ENST00000478423 N6AMT1Q9Y5N5 214 aa13.93□□□□□ -0.18
NPHP4-208ENST00000478423 BHMG1C9JSJ3 638 aaPredicted RBP13.93□□□□□ -0.18
NPHP4-208ENST00000478423 OR1I1O60431 355 aa13.93□□□□□ -0.18
NPHP4-208ENST00000478423 SOCS5O75159 536 aa13.93□□□□□ -0.18
NPHP4-208ENST00000478423 FYNP06241 537 aa13.93□□□□□ -0.18
NPHP4-208ENST00000478423 RB1P06400 928 aa13.93□□□□□ -0.18
NPHP4-208ENST00000478423 GMPRP36959 345 aa13.93□□□□□ -0.18
NPHP4-208ENST00000478423 CDK9P50750 372 aaKnown RBP13.93□□□□□ -0.18
NPHP4-208ENST00000478423 LMAN2Q12907 356 aa13.93□□□□□ -0.18
NPHP4-208ENST00000478423 ZBTB6Q15916 424 aa13.93□□□□□ -0.18
NPHP4-208ENST00000478423 PTCHD4Q6ZW05 846 aa13.93□□□□□ -0.18
NPHP4-208ENST00000478423 SRMSQ9H3Y6 488 aa13.93□□□□□ -0.18
NPHP4-208ENST00000478423 NHSL1Q5SYE7 1610 aa13.92□□□□□ -0.18
NPHP4-208ENST00000478423 hCG_2039718K7EN88 272 aa13.92□□□□□ -0.18
NPHP4-208ENST00000478423 FABP3P05413 133 aa13.92□□□□□ -0.18
NPHP4-208ENST00000478423 DBTP11182 482 aaKnown RBP13.92□□□□□ -0.18
NPHP4-208ENST00000478423 MTHFD1P11586 935 aaKnown RBP13.92□□□□□ -0.18
NPHP4-208ENST00000478423 ARSDP51689 593 aa13.92□□□□□ -0.18
NPHP4-208ENST00000478423 AQP4P55087 323 aa13.92□□□□□ -0.18
NPHP4-208ENST00000478423 NIPAL4Q0D2K0 466 aa13.92□□□□□ -0.18
NPHP4-208ENST00000478423 CYS1Q717R9 158 aa13.92□□□□□ -0.18
NPHP4-208ENST00000478423 SCD5Q86SK9 330 aa13.92□□□□□ -0.18
NPHP4-208ENST00000478423 ZMIZ2Q8NF64 920 aa13.92□□□□□ -0.18
NPHP4-208ENST00000478423 TEX47Q8TBZ9 253 aa13.92□□□□□ -0.18
NPHP4-208ENST00000478423 CANT1Q8WVQ1 401 aa13.92□□□□□ -0.18
NPHP4-208ENST00000478423 TFGQ92734 400 aaPredicted RBP13.92□□□□□ -0.18
NPHP4-208ENST00000478423 KLHL25Q9H0H3 589 aa13.92□□□□□ -0.18
NPHP4-208ENST00000478423 CCNB1IP1Q9NPC3 277 aa13.92□□□□□ -0.18
NPHP4-208ENST00000478423 EDDM13A0A1B0GTR0 161 aa13.92□□□□□ -0.18
NPHP4-208ENST00000478423 E7ENX8 843 aa13.92□□□□□ -0.18
NPHP4-208ENST00000478423 TNFRSF11BO00300 401 aa13.92□□□□□ -0.18
NPHP4-208ENST00000478423 LAMP2P13473 410 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms