RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 RSL1D1O76021 490 aaKnown RBP2.83□□□□□ -1.96
HMGN4-202ENST00000477243 GLCEO94923 617 aa2.83□□□□□ -1.96
HMGN4-202ENST00000477243 ZNF202O95125 648 aa2.83□□□□□ -1.96
HMGN4-202ENST00000477243 ZWINTO95229 277 aa2.83□□□□□ -1.96
HMGN4-202ENST00000477243 FGFR1OPO95684 399 aaKnown RBP2.83□□□□□ -1.96
HMGN4-202ENST00000477243 C9P02748 559 aa2.83□□□□□ -1.96
HMGN4-202ENST00000477243 SBK2P0C263 348 aa2.83□□□□□ -1.96
HMGN4-202ENST00000477243 PLA2G4BP0C869 781 aa2.83□□□□□ -1.96
HMGN4-202ENST00000477243 PCNAP12004 261 aa2.83□□□□□ -1.96
HMGN4-202ENST00000477243 RPA2P15927 270 aa2.83□□□□□ -1.96
HMGN4-202ENST00000477243 FUT1P19526 365 aa2.83□□□□□ -1.96
HMGN4-202ENST00000477243 ACAT1P24752 427 aaKnown RBP2.83□□□□□ -1.96
HMGN4-202ENST00000477243 ACADLP28330 430 aa2.83□□□□□ -1.96
HMGN4-202ENST00000477243 PTGER1P34995 402 aa2.83□□□□□ -1.96
HMGN4-202ENST00000477243 ADMP35318 185 aa2.83□□□□□ -1.96
HMGN4-202ENST00000477243 ETV4P43268 484 aa2.83□□□□□ -1.96
HMGN4-202ENST00000477243 OR1G1P47890 313 aa2.83□□□□□ -1.96
HMGN4-202ENST00000477243 CEBPDP49716 269 aaPredicted RBP2.83□□□□□ -1.96
HMGN4-202ENST00000477243 NUMBP49757 651 aa2.83□□□□□ -1.96
HMGN4-202ENST00000477243 ASCL1P50553 236 aa2.83□□□□□ -1.96
HMGN4-202ENST00000477243 HNRNPFP52597 415 aaKnown RBP2.83□□□□□ -1.96
HMGN4-202ENST00000477243 CACNA2D1P54289 1103 aa2.83□□□□□ -1.96
HMGN4-202ENST00000477243 AIF1P55008 147 aa2.83□□□□□ -1.96
HMGN4-202ENST00000477243 TAS2R40P59535 323 aa2.83□□□□□ -1.96
HMGN4-202ENST00000477243 SSTP61278 116 aa2.83□□□□□ -1.96
HMGN4-202ENST00000477243 UBE2HP62256 183 aa2.83□□□□□ -1.96
HMGN4-202ENST00000477243 RPL23AP62750 156 aaKnown RBP2.83□□□□□ -1.96
HMGN4-202ENST00000477243 MRPS34P82930 218 aaKnown RBP2.83□□□□□ -1.96
HMGN4-202ENST00000477243 ECT2LQ008S8 904 aa2.83□□□□□ -1.96
HMGN4-202ENST00000477243 DNASE1L3Q13609 305 aa2.83□□□□□ -1.96
HMGN4-202ENST00000477243 CUL1Q13616 776 aa2.83□□□□□ -1.96
HMGN4-202ENST00000477243 DHX34Q14147 1143 aaKnown RBP2.83□□□□□ -1.96
HMGN4-202ENST00000477243 DLG2Q15700 870 aa2.83□□□□□ -1.96
HMGN4-202ENST00000477243 CPSF6Q16630 551 aaKnown RBP eCLIP2.83□□□□□ -1.96
HMGN4-202ENST00000477243 PDK4Q16654 411 aa2.83□□□□□ -1.96
HMGN4-202ENST00000477243 KIF19Q2TAC6 998 aa2.83□□□□□ -1.96
HMGN4-202ENST00000477243 USP41Q3LFD5 358 aa2.83□□□□□ -1.96
HMGN4-202ENST00000477243 MCMDC2Q4G0Z9 681 aa2.83□□□□□ -1.96
HMGN4-202ENST00000477243 PLEKHO1Q53GL0 409 aaPredicted RBP2.83□□□□□ -1.96
HMGN4-202ENST00000477243 LRRC73Q5JTD7 316 aa2.83□□□□□ -1.96
HMGN4-202ENST00000477243 ARMC12Q5T9G4 340 aa2.83□□□□□ -1.96
HMGN4-202ENST00000477243 SLFN13Q68D06 897 aa2.83□□□□□ -1.96
HMGN4-202ENST00000477243 TXNRD3NBQ6F5E7 133 aa2.83□□□□□ -1.96
HMGN4-202ENST00000477243 WBP2NLQ6ICG8 309 aa2.83□□□□□ -1.96
HMGN4-202ENST00000477243 TMEM211Q6ICI0 200 aa2.83□□□□□ -1.96
HMGN4-202ENST00000477243 SULT1C3Q6IMI6 304 aa2.83□□□□□ -1.96
HMGN4-202ENST00000477243 ERICH5Q6P6B1 374 aa2.83□□□□□ -1.96
HMGN4-202ENST00000477243 ENPP7Q6UWV6 458 aa2.83□□□□□ -1.96
HMGN4-202ENST00000477243 DLEU7Q6UYE1 221 aa2.83□□□□□ -1.96
HMGN4-202ENST00000477243 SLC39A5Q6ZMH5 540 aa2.83□□□□□ -1.96
HMGN4-202ENST00000477243 TMEM182Q6ZP80 229 aaPredicted RBP2.83□□□□□ -1.96
HMGN4-202ENST00000477243 EFL1Q7Z2Z2 1120 aaKnown RBP2.83□□□□□ -1.96
HMGN4-202ENST00000477243 PALM2Q8IXS6 379 aa2.83□□□□□ -1.96
HMGN4-202ENST00000477243 ZNF808Q8N4W9 903 aaPredicted RBP2.83□□□□□ -1.96
HMGN4-202ENST00000477243 ZCCHC9Q8N567 271 aaKnown RBP2.83□□□□□ -1.96
HMGN4-202ENST00000477243 TRIML2Q8N7C3 387 aa2.83□□□□□ -1.96
HMGN4-202ENST00000477243 RNF148Q8N7C7 305 aa2.83□□□□□ -1.96
HMGN4-202ENST00000477243 NECAB1Q8N987 351 aa2.83□□□□□ -1.96
HMGN4-202ENST00000477243 FADS6Q8N9I5 356 aa2.83□□□□□ -1.96
HMGN4-202ENST00000477243 CLEC1AQ8NC01 280 aa2.83□□□□□ -1.96
HMGN4-202ENST00000477243 OR56B1Q8NGI3 324 aa2.83□□□□□ -1.96
HMGN4-202ENST00000477243 OR52B4Q8NGK2 314 aa2.83□□□□□ -1.96
HMGN4-202ENST00000477243 HUS1BQ8NHY5 278 aa2.83□□□□□ -1.96
HMGN4-202ENST00000477243 CPA5Q8WXQ8 436 aa2.83□□□□□ -1.96
HMGN4-202ENST00000477243 NSMAFQ92636 917 aa2.83□□□□□ -1.96
HMGN4-202ENST00000477243 NCLNQ969V3 563 aa2.83□□□□□ -1.96
HMGN4-202ENST00000477243 ST6GALNAC6Q969X2 333 aa2.83□□□□□ -1.96
HMGN4-202ENST00000477243 SLCO4A1Q96BD0 722 aa2.83□□□□□ -1.96
HMGN4-202ENST00000477243 NXNL1Q96CM4 212 aa2.83□□□□□ -1.96
HMGN4-202ENST00000477243 MSI2Q96DH6 328 aaKnown RBP2.83□□□□□ -1.96
HMGN4-202ENST00000477243 ERLEC1Q96DZ1 483 aa2.83□□□□□ -1.96
HMGN4-202ENST00000477243 RRNAD1Q96FB5 475 aaKnown RBP2.83□□□□□ -1.96
HMGN4-202ENST00000477243 DTD2Q96FN9 168 aa2.83□□□□□ -1.96
HMGN4-202ENST00000477243 LIN37Q96GY3 246 aaPredicted RBP2.83□□□□□ -1.96
HMGN4-202ENST00000477243 MSANTD3Q96H12 275 aa2.83□□□□□ -1.96
HMGN4-202ENST00000477243 PRICKLE1Q96MT3 831 aaPredicted RBP2.83□□□□□ -1.96
HMGN4-202ENST00000477243 CATSPER2Q96P56 530 aa2.83□□□□□ -1.96
HMGN4-202ENST00000477243 PLEKHG4BQ96PX9 1271 aa2.83□□□□□ -1.96
HMGN4-202ENST00000477243 PANX3Q96QZ0 392 aa2.83□□□□□ -1.96
HMGN4-202ENST00000477243 PNKPQ96T60 521 aa2.83□□□□□ -1.96
HMGN4-202ENST00000477243 SEPHS2Q99611 448 aa2.83□□□□□ -1.96
HMGN4-202ENST00000477243 ASCL2Q99929 193 aa2.83□□□□□ -1.96
HMGN4-202ENST00000477243 SPAG8Q99932 426 aaPredicted RBP2.83□□□□□ -1.96
HMGN4-202ENST00000477243 ZNF577Q9BSK1 485 aa2.83□□□□□ -1.96
HMGN4-202ENST00000477243 EDEM2Q9BV94 578 aa2.83□□□□□ -1.96
HMGN4-202ENST00000477243 GTPBP2Q9BX10 602 aaKnown RBP2.83□□□□□ -1.96
HMGN4-202ENST00000477243 HDHD5Q9BXW7 423 aa2.83□□□□□ -1.96
HMGN4-202ENST00000477243 NMNAT2Q9BZQ4 307 aa2.83□□□□□ -1.96
HMGN4-202ENST00000477243 ADAMTS10Q9H324 1103 aa2.83□□□□□ -1.96
HMGN4-202ENST00000477243 LMAN1LQ9HAT1 526 aa2.83□□□□□ -1.96
HMGN4-202ENST00000477243 CHMP1AQ9HD42 196 aaPredicted RBP2.83□□□□□ -1.96
HMGN4-202ENST00000477243 TNFRSF12AQ9NP84 129 aa2.83□□□□□ -1.96
HMGN4-202ENST00000477243 PANK4Q9NVE7 773 aa2.83□□□□□ -1.96
HMGN4-202ENST00000477243 MRPS18AQ9NVS2 196 aaKnown RBP2.83□□□□□ -1.96
HMGN4-202ENST00000477243 SIRT5Q9NXA8 310 aa2.83□□□□□ -1.96
HMGN4-202ENST00000477243 P4HTMQ9NXG6 502 aa2.83□□□□□ -1.96
HMGN4-202ENST00000477243 KLHL28Q9NXS3 571 aa2.83□□□□□ -1.96
HMGN4-202ENST00000477243 LARSQ9P2J5 1176 aaKnown RBP2.83□□□□□ -1.96
HMGN4-202ENST00000477243 DBNLQ9UJU6 430 aaKnown RBP2.83□□□□□ -1.96
HMGN4-202ENST00000477243 TMEM59LQ9UK28 342 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms