RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 DMRTB1Q96MA1 342 aa6.74□□□□□ -1.33
UBR4-212ENST00000475973 PSKH2Q96QS6 385 aa6.74□□□□□ -1.33
UBR4-212ENST00000475973 FAM129BQ96TA1 746 aa6.74□□□□□ -1.33
UBR4-212ENST00000475973 TTPALQ9BTX7 342 aa6.74□□□□□ -1.33
UBR4-212ENST00000475973 BDH2Q9BUT1 245 aa6.74□□□□□ -1.33
UBR4-212ENST00000475973 CHID1Q9BWS9 393 aa6.74□□□□□ -1.33
UBR4-212ENST00000475973 BTBD2Q9BX70 525 aa6.74□□□□□ -1.33
UBR4-212ENST00000475973 MROQ9BYG7 248 aa6.74□□□□□ -1.33
UBR4-212ENST00000475973 GPR62Q9BZJ7 368 aa6.74□□□□□ -1.33
UBR4-212ENST00000475973 UNKQ9C0B0 810 aaKnown RBP6.74□□□□□ -1.33
UBR4-212ENST00000475973 GABARAPL1Q9H0R8 117 aa6.74□□□□□ -1.33
UBR4-212ENST00000475973 P2RY12Q9H244 342 aa6.74□□□□□ -1.33
UBR4-212ENST00000475973 ATXN3LQ9H3M9 355 aa6.74□□□□□ -1.33
UBR4-212ENST00000475973 MAGIXQ9H6Y5 334 aa6.74□□□□□ -1.33
UBR4-212ENST00000475973 MID1IP1Q9NPA3 183 aa6.74□□□□□ -1.33
UBR4-212ENST00000475973 LATS2Q9NRM7 1088 aa6.74□□□□□ -1.33
UBR4-212ENST00000475973 SLAMF8Q9P0V8 285 aa6.74□□□□□ -1.33
UBR4-212ENST00000475973 IFT80Q9P2H3 777 aaPredicted RBP6.74□□□□□ -1.33
UBR4-212ENST00000475973 DNMT3BQ9UBC3 853 aaKnown RBP6.74□□□□□ -1.33
UBR4-212ENST00000475973 UXTQ9UBK9 157 aaPredicted RBP6.74□□□□□ -1.33
UBR4-212ENST00000475973 FBXL21Q9UKT6 434 aa6.74□□□□□ -1.33
UBR4-212ENST00000475973 PSME2Q9UL46 239 aa6.74□□□□□ -1.33
UBR4-212ENST00000475973 DUSP12Q9UNI6 340 aa6.74□□□□□ -1.33
UBR4-212ENST00000475973 ERGIC3Q9Y282 383 aa6.74□□□□□ -1.33
UBR4-212ENST00000475973 MAN2B2Q9Y2E5 1009 aa6.74□□□□□ -1.33
UBR4-212ENST00000475973 AP3M1Q9Y2T2 418 aa6.74□□□□□ -1.33
UBR4-212ENST00000475973 KCTD3Q9Y597 815 aa6.74□□□□□ -1.33
UBR4-212ENST00000475973 TIMM13Q9Y5L4 95 aaPredicted RBP6.74□□□□□ -1.33
UBR4-212ENST00000475973 SHROOM3Q8TF72 1996 aa6.74□□□□□ -1.33
UBR4-212ENST00000475973 TCF20Q9UGU0 1960 aaKnown RBP6.74□□□□□ -1.33
UBR4-212ENST00000475973 BPTFQ12830 3046 aa6.74□□□□□ -1.33
UBR4-212ENST00000475973 A0A1W2PQH9 124 aa6.73□□□□□ -1.33
UBR4-212ENST00000475973 FUOMA2VDF0 154 aa6.73□□□□□ -1.33
UBR4-212ENST00000475973 SYCE1LA8MT33 242 aa6.73□□□□□ -1.33
UBR4-212ENST00000475973 F8W810 466 aa6.73□□□□□ -1.33
UBR4-212ENST00000475973 LSM1O15116 133 aaKnown RBP6.73□□□□□ -1.33
UBR4-212ENST00000475973 MAGEB3O15480 346 aa6.73□□□□□ -1.33
UBR4-212ENST00000475973 SPINT1O43278 529 aa6.73□□□□□ -1.33
UBR4-212ENST00000475973 TGM5O43548 720 aa6.73□□□□□ -1.33
UBR4-212ENST00000475973 PFDN1O60925 122 aa6.73□□□□□ -1.33
UBR4-212ENST00000475973 XYLBO75191 536 aa6.73□□□□□ -1.33
UBR4-212ENST00000475973 UGT2B11O75310 529 aa6.73□□□□□ -1.33
UBR4-212ENST00000475973 B3GAT3O94766 335 aa6.73□□□□□ -1.33
UBR4-212ENST00000475973 GABARAPO95166 117 aa6.73□□□□□ -1.33
UBR4-212ENST00000475973 STAMBPO95630 424 aa6.73□□□□□ -1.33
UBR4-212ENST00000475973 EFEMP2O95967 443 aa6.73□□□□□ -1.33
UBR4-212ENST00000475973 FUCA1P04066 466 aa6.73□□□□□ -1.33
UBR4-212ENST00000475973 SEMG1P04279 462 aa6.73□□□□□ -1.33
UBR4-212ENST00000475973 ASGR2P07307 311 aa6.73□□□□□ -1.33
UBR4-212ENST00000475973 RETP07949 1114 aa6.73□□□□□ -1.33
UBR4-212ENST00000475973 HNRNPA1P09651 372 aaKnown RBP eCLIP6.73□□□□□ -1.33
UBR4-212ENST00000475973 ITGAMP11215 1152 aa6.73□□□□□ -1.33
UBR4-212ENST00000475973 ACPPP15309 386 aa6.73□□□□□ -1.33
UBR4-212ENST00000475973 TCF3P15923 654 aa6.73□□□□□ -1.33
UBR4-212ENST00000475973 NELFEP18615 380 aaKnown RBP6.73□□□□□ -1.33
UBR4-212ENST00000475973 CES1P23141 567 aa6.73□□□□□ -1.33
UBR4-212ENST00000475973 PTPN6P29350 595 aa6.73□□□□□ -1.33
UBR4-212ENST00000475973 PRDX3P30048 256 aaKnown RBP6.73□□□□□ -1.33
UBR4-212ENST00000475973 CD6P30203 668 aa6.73□□□□□ -1.33
UBR4-212ENST00000475973 HOXA9P31269 272 aa6.73□□□□□ -1.33
UBR4-212ENST00000475973 BCAP31P51572 246 aa6.73□□□□□ -1.33
UBR4-212ENST00000475973 POLR2JP52435 117 aaKnown RBP6.73□□□□□ -1.33
UBR4-212ENST00000475973 UFM1P61960 85 aa6.73□□□□□ -1.33
UBR4-212ENST00000475973 TOP3AQ13472 1001 aaPredicted RBP6.73□□□□□ -1.33
UBR4-212ENST00000475973 TDGQ13569 410 aa6.73□□□□□ -1.33
UBR4-212ENST00000475973 PWP1Q13610 501 aa6.73□□□□□ -1.33
UBR4-212ENST00000475973 CAPRIN1Q14444 709 aaKnown RBP6.73□□□□□ -1.33
UBR4-212ENST00000475973 POLD3Q15054 466 aaPredicted RBP6.73□□□□□ -1.33
UBR4-212ENST00000475973 ACOX1Q15067 660 aa6.73□□□□□ -1.33
UBR4-212ENST00000475973 BCL2A1Q16548 175 aa6.73□□□□□ -1.33
UBR4-212ENST00000475973 NKG7Q16617 165 aa6.73□□□□□ -1.33
UBR4-212ENST00000475973 CTF1Q16619 201 aa6.73□□□□□ -1.33
UBR4-212ENST00000475973 CYP51A1Q16850 503 aa6.73□□□□□ -1.33
UBR4-212ENST00000475973 C6orf141Q5SZD1 244 aa6.73□□□□□ -1.33
UBR4-212ENST00000475973 LRIF1Q5T3J3 769 aa6.73□□□□□ -1.33
UBR4-212ENST00000475973 FAM171A1Q5VUB5 890 aa6.73□□□□□ -1.33
UBR4-212ENST00000475973 TTC23Q5W5X9 447 aa6.73□□□□□ -1.33
UBR4-212ENST00000475973 GLYATQ6IB77 296 aa6.73□□□□□ -1.33
UBR4-212ENST00000475973 SULT1C3Q6IMI6 304 aa6.73□□□□□ -1.33
UBR4-212ENST00000475973 UGT3A1Q6NUS8 523 aa6.73□□□□□ -1.33
UBR4-212ENST00000475973 NIPAL1Q6NVV3 410 aa6.73□□□□□ -1.33
UBR4-212ENST00000475973 FBXL22Q6P050 247 aa6.73□□□□□ -1.33
UBR4-212ENST00000475973 TTC23LQ6PF05 361 aa6.73□□□□□ -1.33
UBR4-212ENST00000475973 PAQR3Q6TCH7 311 aa6.73□□□□□ -1.33
UBR4-212ENST00000475973 LAYNQ6UX15 382 aa6.73□□□□□ -1.33
UBR4-212ENST00000475973 ISLR2Q6UXK2 745 aa6.73□□□□□ -1.33
UBR4-212ENST00000475973 TMEM26Q6ZUK4 368 aa6.73□□□□□ -1.33
UBR4-212ENST00000475973 GET4Q7L5D6 327 aaPredicted RBP6.73□□□□□ -1.33
UBR4-212ENST00000475973 GPR155Q7Z3F1 870 aa6.73□□□□□ -1.33
UBR4-212ENST00000475973 TRIM46Q7Z4K8 759 aa6.73□□□□□ -1.33
UBR4-212ENST00000475973 THAP5Q7Z6K1 395 aa6.73□□□□□ -1.33
UBR4-212ENST00000475973 TRIM74Q86UV6 250 aa6.73□□□□□ -1.33
UBR4-212ENST00000475973 TRIM73Q86UV7 250 aa6.73□□□□□ -1.33
UBR4-212ENST00000475973 ATCAYQ86WG3 371 aa6.73□□□□□ -1.33
UBR4-212ENST00000475973 METTL23Q86XA0 190 aa6.73□□□□□ -1.33
UBR4-212ENST00000475973 MSRB3Q8IXL7 192 aa6.73□□□□□ -1.33
UBR4-212ENST00000475973 SPARTQ8N0X7 666 aa6.73□□□□□ -1.33
UBR4-212ENST00000475973 SVOPLQ8N434 492 aa6.73□□□□□ -1.33
UBR4-212ENST00000475973 FBXO39Q8N4B4 442 aa6.73□□□□□ -1.33
UBR4-212ENST00000475973 TTC30BQ8N4P2 665 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms