RNA–Protein interactions for RNA: ENST00000475912.1

PRKD3-208, Transcript of protein kinase D3, human

TSL 3

Gene PRKD3, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKD3-208	ENST00000475912	STPG1	Q5TH74	334 aa		4.62	□□□□□ -1.67
PRKD3-208	ENST00000475912	ZSCAN25	Q6NSZ9	544 aa		4.62	□□□□□ -1.67
PRKD3-208	ENST00000475912	TMEM81	Q6P7N7	255 aa		4.62	□□□□□ -1.67
PRKD3-208	ENST00000475912	DCLRE1A	Q6PJP8	1040 aa		4.62	□□□□□ -1.67
PRKD3-208	ENST00000475912	METTL7B	Q6UX53	244 aa		4.62	□□□□□ -1.67
PRKD3-208	ENST00000475912	GSG1L	Q6UXU4	331 aa		4.62	□□□□□ -1.67
PRKD3-208	ENST00000475912	RSRC2	Q7L4I2	434 aa	Known RBP	4.62	□□□□□ -1.67
PRKD3-208	ENST00000475912	TMEM173	Q86WV6	379 aa	Predicted RBP	4.62	□□□□□ -1.67
PRKD3-208	ENST00000475912	DHX40	Q8IX18	779 aa	Known RBP	4.62	□□□□□ -1.67
PRKD3-208	ENST00000475912	SLC39A11	Q8N1S5	342 aa		4.62	□□□□□ -1.67
PRKD3-208	ENST00000475912	SCCPDH	Q8NBX0	429 aa		4.62	□□□□□ -1.67
PRKD3-208	ENST00000475912	ST8SIA4	Q92187	359 aa		4.62	□□□□□ -1.67
PRKD3-208	ENST00000475912	FIG4	Q92562	907 aa		4.62	□□□□□ -1.67
PRKD3-208	ENST00000475912	FRAT1	Q92837	279 aa	Predicted RBP	4.62	□□□□□ -1.67
PRKD3-208	ENST00000475912	FBXL8	Q96CD0	374 aa		4.62	□□□□□ -1.67
PRKD3-208	ENST00000475912	TMEM19	Q96HH6	336 aa		4.62	□□□□□ -1.67
PRKD3-208	ENST00000475912	CASD1	Q96PB1	797 aa		4.62	□□□□□ -1.67
PRKD3-208	ENST00000475912	MYADM	Q96S97	322 aa		4.62	□□□□□ -1.67
PRKD3-208	ENST00000475912	EPYC	Q99645	322 aa		4.62	□□□□□ -1.67
PRKD3-208	ENST00000475912	AGXT2	Q9BYV1	514 aa		4.62	□□□□□ -1.67
PRKD3-208	ENST00000475912	SPRY4	Q9C004	299 aa		4.62	□□□□□ -1.67
PRKD3-208	ENST00000475912	INTS2	Q9H0H0	1204 aa	Known RBP	4.62	□□□□□ -1.67
PRKD3-208	ENST00000475912	ZHX3	Q9H4I2	956 aa		4.62	□□□□□ -1.67
PRKD3-208	ENST00000475912	PRMT8	Q9NR22	394 aa	Predicted RBP	4.62	□□□□□ -1.67
PRKD3-208	ENST00000475912	EPS15L1	Q9UBC2	864 aa		4.62	□□□□□ -1.67
PRKD3-208	ENST00000475912	HSPB7	Q9UBY9	170 aa		4.62	□□□□□ -1.67
PRKD3-208	ENST00000475912	VDAC3	Q9Y277	283 aa		4.62	□□□□□ -1.67
PRKD3-208	ENST00000475912	PSAT1	Q9Y617	370 aa		4.62	□□□□□ -1.67
PRKD3-208	ENST00000475912	ABCB11	O95342	1321 aa		4.62	□□□□□ -1.67
PRKD3-208	ENST00000475912	PATJ	Q8NI35	1801 aa		4.62	□□□□□ -1.67
PRKD3-208	ENST00000475912	KALRN	O60229	2985 aa		4.61	□□□□□ -1.67
PRKD3-208	ENST00000475912	KANSL1L	A0AUZ9	987 aa		4.61	□□□□□ -1.67
PRKD3-208	ENST00000475912	ZNF587B	E7ETH6	402 aa		4.61	□□□□□ -1.67
PRKD3-208	ENST00000475912	IFNL4	K9M1U5	179 aa		4.61	□□□□□ -1.67
PRKD3-208	ENST00000475912	RANBP6	O60518	1105 aa	Known RBP	4.61	□□□□□ -1.67
PRKD3-208	ENST00000475912	LRP3	O75074	770 aa		4.61	□□□□□ -1.67
PRKD3-208	ENST00000475912	GUCY1B2	O75343	617 aa		4.61	□□□□□ -1.67
PRKD3-208	ENST00000475912	TIPRL	O75663	272 aa		4.61	□□□□□ -1.67
PRKD3-208	ENST00000475912	GAS8-AS1	O95177	125 aa		4.61	□□□□□ -1.67
PRKD3-208	ENST00000475912	MMP2	P08253	660 aa		4.61	□□□□□ -1.67
PRKD3-208	ENST00000475912	HSPD1	P10809	573 aa	Known RBP	4.61	□□□□□ -1.67
PRKD3-208	ENST00000475912	TOP1	P11387	765 aa	Known RBP	4.61	□□□□□ -1.67
PRKD3-208	ENST00000475912	G6PD	P11413	515 aa		4.61	□□□□□ -1.67
PRKD3-208	ENST00000475912	SRC	P12931	536 aa		4.61	□□□□□ -1.67
PRKD3-208	ENST00000475912	MARK3	P27448	753 aa		4.61	□□□□□ -1.67
PRKD3-208	ENST00000475912	HOXA13	P31271	388 aa	Predicted RBP	4.61	□□□□□ -1.67
PRKD3-208	ENST00000475912	CA8	P35219	290 aa		4.61	□□□□□ -1.67
PRKD3-208	ENST00000475912	EIF2S3	P41091	472 aa	Known RBP	4.61	□□□□□ -1.67
PRKD3-208	ENST00000475912	ZNF132	P52740	706 aa		4.61	□□□□□ -1.67
PRKD3-208	ENST00000475912	SP4	Q02446	784 aa		4.61	□□□□□ -1.67
PRKD3-208	ENST00000475912	QRICH1	Q2TAL8	776 aa		4.61	□□□□□ -1.67
PRKD3-208	ENST00000475912	OTUD3	Q5T2D3	398 aa	Predicted RBP	4.61	□□□□□ -1.67
PRKD3-208	ENST00000475912	FAM180B	Q6P0A1	224 aa		4.61	□□□□□ -1.67
PRKD3-208	ENST00000475912	CCNI2	Q6ZMN8	369 aa	Predicted RBP	4.61	□□□□□ -1.67
PRKD3-208	ENST00000475912	STOX1	Q6ZVD7	989 aa		4.61	□□□□□ -1.67
PRKD3-208	ENST00000475912	MTSS1L	Q765P7	747 aa		4.61	□□□□□ -1.67
PRKD3-208	ENST00000475912	SATL1	Q86VE3	508 aa		4.61	□□□□□ -1.67
PRKD3-208	ENST00000475912	TMPRSS12	Q86WS5	348 aa		4.61	□□□□□ -1.67
PRKD3-208	ENST00000475912	SFR1	Q86XK3	245 aa		4.61	□□□□□ -1.67
PRKD3-208	ENST00000475912	TDRP	Q86YL5	185 aa		4.61	□□□□□ -1.67
PRKD3-208	ENST00000475912	ZCCHC9	Q8N567	271 aa	Known RBP	4.61	□□□□□ -1.67
PRKD3-208	ENST00000475912	C11orf65	Q8NCR3	313 aa		4.61	□□□□□ -1.67
PRKD3-208	ENST00000475912	ZNF558	Q96NG5	402 aa		4.61	□□□□□ -1.67
PRKD3-208	ENST00000475912	KXD1	Q9BQD3	176 aa		4.61	□□□□□ -1.67
PRKD3-208	ENST00000475912	HAUS8	Q9BT25	410 aa		4.61	□□□□□ -1.67
PRKD3-208	ENST00000475912	RPP25	Q9BUL9	199 aa	Known RBP	4.61	□□□□□ -1.67
PRKD3-208	ENST00000475912	ZBP1	Q9H171	429 aa		4.61	□□□□□ -1.67
PRKD3-208	ENST00000475912	ESRP2	Q9H6T0	727 aa	Known RBP	4.61	□□□□□ -1.67
PRKD3-208	ENST00000475912	JMJD4	Q9H9V9	463 aa		4.61	□□□□□ -1.67
PRKD3-208	ENST00000475912	C17orf75	Q9HAS0	396 aa		4.61	□□□□□ -1.67
PRKD3-208	ENST00000475912	CNGB3	Q9NQW8	809 aa		4.61	□□□□□ -1.67
PRKD3-208	ENST00000475912	RGS18	Q9NS28	235 aa		4.61	□□□□□ -1.67
PRKD3-208	ENST00000475912	C20orf141	Q9NUB4	165 aa		4.61	□□□□□ -1.67
PRKD3-208	ENST00000475912	BEX4	Q9NWD9	120 aa	Predicted RBP	4.61	□□□□□ -1.67
PRKD3-208	ENST00000475912	SPG21	Q9NZD8	308 aa		4.61	□□□□□ -1.67
PRKD3-208	ENST00000475912	C1RL	Q9NZP8	487 aa		4.61	□□□□□ -1.67
PRKD3-208	ENST00000475912	TINAG	Q9UJW2	476 aa		4.61	□□□□□ -1.67
PRKD3-208	ENST00000475912	RCOR1	Q9UKL0	485 aa		4.61	□□□□□ -1.67
PRKD3-208	ENST00000475912	ZNF215	Q9UL58	517 aa	Predicted RBP	4.61	□□□□□ -1.67
PRKD3-208	ENST00000475912	TBX20	Q9UMR3	447 aa		4.61	□□□□□ -1.67
PRKD3-208	ENST00000475912	ARHGAP26	Q9UNA1	814 aa		4.61	□□□□□ -1.67
PRKD3-208	ENST00000475912	FAM96B	Q9Y3D0	163 aa		4.61	□□□□□ -1.67
PRKD3-208	ENST00000475912	TRPV2	Q9Y5S1	764 aa		4.61	□□□□□ -1.67
PRKD3-208	ENST00000475912	MYH7B	A7E2Y1	1941 aa		4.61	□□□□□ -1.67
PRKD3-208	ENST00000475912	NAV2	Q8IVL1	2488 aa		4.61	□□□□□ -1.67
PRKD3-208	ENST00000475912	LOXHD1	Q8IVV2	1947 aa		4.6	□□□□□ -1.67
PRKD3-208	ENST00000475912	SHISA7	A6NL88	538 aa		4.6	□□□□□ -1.67
PRKD3-208	ENST00000475912		B4E171	279 aa		4.6	□□□□□ -1.67
PRKD3-208	ENST00000475912	ANHX	E9PGG2	379 aa		4.6	□□□□□ -1.67
PRKD3-208	ENST00000475912	IPO8	O15397	1037 aa	Known RBP	4.6	□□□□□ -1.67
PRKD3-208	ENST00000475912	RNF113A	O15541	343 aa	Known RBP	4.6	□□□□□ -1.67
PRKD3-208	ENST00000475912	SOCS5	O75159	536 aa		4.6	□□□□□ -1.67
PRKD3-208	ENST00000475912	RFPL2	O75678	378 aa		4.6	□□□□□ -1.67
PRKD3-208	ENST00000475912	KCNK5	O95279	499 aa		4.6	□□□□□ -1.67
PRKD3-208	ENST00000475912	CXCL14	O95715	111 aa		4.6	□□□□□ -1.67
PRKD3-208	ENST00000475912	TBX18	O95935	607 aa		4.6	□□□□□ -1.67
PRKD3-208	ENST00000475912	RET	P07949	1114 aa		4.6	□□□□□ -1.67
PRKD3-208	ENST00000475912	SP1	P08047	785 aa		4.6	□□□□□ -1.67
PRKD3-208	ENST00000475912	CYC1	P08574	325 aa		4.6	□□□□□ -1.67
PRKD3-208	ENST00000475912	AGA	P20933	346 aa		4.6	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms