RNA–Protein interactions for RNA: ENST00000475772.5

CALD1-217, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-217ENST00000475772 ITGA9Q13797 1035 aa10.12□□□□□ -0.79
CALD1-217ENST00000475772 PTCHD3Q3KNS1 767 aa10.12□□□□□ -0.79
CALD1-217ENST00000475772 ZNF658BQ4V348 819 aaPredicted RBP10.12□□□□□ -0.79
CALD1-217ENST00000475772 BCL7AQ4VC05 210 aa10.12□□□□□ -0.79
CALD1-217ENST00000475772 CRB2Q5IJ48 1285 aa10.12□□□□□ -0.79
CALD1-217ENST00000475772 ZDHHC20Q5W0Z9 365 aa10.12□□□□□ -0.79
CALD1-217ENST00000475772 ZC3H18Q86VM9 953 aaKnown RBP10.12□□□□□ -0.79
CALD1-217ENST00000475772 CFAP206Q8IYR0 622 aa10.12□□□□□ -0.79
CALD1-217ENST00000475772 OR8K5Q8NH50 307 aa10.12□□□□□ -0.79
CALD1-217ENST00000475772 TFB1MQ8WVM0 346 aaKnown RBP10.12□□□□□ -0.79
CALD1-217ENST00000475772 CPT1BQ92523 772 aa10.12□□□□□ -0.79
CALD1-217ENST00000475772 SNRNP40Q96DI7 357 aaKnown RBP10.12□□□□□ -0.79
CALD1-217ENST00000475772 IQCDQ96DY2 449 aa10.12□□□□□ -0.79
CALD1-217ENST00000475772 NSUN5Q96P11 429 aaKnown RBP10.12□□□□□ -0.79
CALD1-217ENST00000475772 RANBP9Q96S59 729 aa10.12□□□□□ -0.79
CALD1-217ENST00000475772 C10orf88Q9H8K7 445 aa10.12□□□□□ -0.79
CALD1-217ENST00000475772 CASS4Q9NQ75 786 aa10.12□□□□□ -0.79
CALD1-217ENST00000475772 C1GALT1Q9NS00 363 aa10.12□□□□□ -0.79
CALD1-217ENST00000475772 HACD3Q9P035 362 aa10.12□□□□□ -0.79
CALD1-217ENST00000475772 ERRFI1Q9UJM3 462 aaPredicted RBP10.12□□□□□ -0.79
CALD1-217ENST00000475772 POMT2Q9UKY4 750 aa10.12□□□□□ -0.79
CALD1-217ENST00000475772 SNX7Q9UNH6 387 aa10.12□□□□□ -0.79
CALD1-217ENST00000475772 TMEM150CB9EJG8 249 aa10.11□□□□□ -0.79
CALD1-217ENST00000475772 MASP2O00187 686 aa10.11□□□□□ -0.79
CALD1-217ENST00000475772 DPM1O60762 260 aa10.11□□□□□ -0.79
CALD1-217ENST00000475772 KLF7O75840 302 aaPredicted RBP10.11□□□□□ -0.79
CALD1-217ENST00000475772 RGS9O75916 674 aaPredicted RBP10.11□□□□□ -0.79
CALD1-217ENST00000475772 CBX6O95503 412 aa10.11□□□□□ -0.79
CALD1-217ENST00000475772 LDLRP01130 860 aa10.11□□□□□ -0.79
CALD1-217ENST00000475772 MSL3P1P0C860 447 aa10.11□□□□□ -0.79
CALD1-217ENST00000475772 TNNT1P13805 278 aa10.11□□□□□ -0.79
CALD1-217ENST00000475772 HLA-DPA1P20036 260 aa10.11□□□□□ -0.79
CALD1-217ENST00000475772 MSH3P20585 1137 aa10.11□□□□□ -0.79
CALD1-217ENST00000475772 COMTP21964 271 aa10.11□□□□□ -0.79
CALD1-217ENST00000475772 CDH3P22223 829 aa10.11□□□□□ -0.79
CALD1-217ENST00000475772 ADRA1AP35348 466 aa10.11□□□□□ -0.79
CALD1-217ENST00000475772 LMAN1P49257 510 aa10.11□□□□□ -0.79
CALD1-217ENST00000475772 VAV2P52735 878 aa10.11□□□□□ -0.79
CALD1-217ENST00000475772 MPP3Q13368 585 aa10.11□□□□□ -0.79
CALD1-217ENST00000475772 TCEAL1Q15170 157 aa10.11□□□□□ -0.79
CALD1-217ENST00000475772 LONRF2Q1L5Z9 754 aa10.11□□□□□ -0.79
CALD1-217ENST00000475772 TMTC4Q5T4D3 741 aa10.11□□□□□ -0.79
CALD1-217ENST00000475772 KAZNQ674X7 775 aa10.11□□□□□ -0.79
CALD1-217ENST00000475772 MYO7BQ6PIF6 2116 aa10.11□□□□□ -0.79
CALD1-217ENST00000475772 RANBP10Q6VN20 620 aa10.11□□□□□ -0.79
CALD1-217ENST00000475772 SPOCD1Q6ZMY3 1216 aa10.11□□□□□ -0.79
CALD1-217ENST00000475772 MED25Q71SY5 747 aa10.11□□□□□ -0.79
CALD1-217ENST00000475772 SYTL1Q8IYJ3 562 aa10.11□□□□□ -0.79
CALD1-217ENST00000475772 CARFQ8N187 725 aa10.11□□□□□ -0.79
CALD1-217ENST00000475772 TMEM102Q8N9M5 508 aaPredicted RBP10.11□□□□□ -0.79
CALD1-217ENST00000475772 PHC3Q8NDX5 983 aa10.11□□□□□ -0.79
CALD1-217ENST00000475772 IPMKQ8NFU5 416 aa10.11□□□□□ -0.79
CALD1-217ENST00000475772 OR4K2Q8NGD2 314 aa10.11□□□□□ -0.79
CALD1-217ENST00000475772 OR8K1Q8NGG5 319 aa10.11□□□□□ -0.79
CALD1-217ENST00000475772 OR13C4Q8NGS5 318 aa10.11□□□□□ -0.79
CALD1-217ENST00000475772 PNPLA2Q96AD5 504 aa10.11□□□□□ -0.79
CALD1-217ENST00000475772 TRAPPC9Q96Q05 1148 aa10.11□□□□□ -0.79
CALD1-217ENST00000475772 DNAJC7Q99615 494 aa10.11□□□□□ -0.79
CALD1-217ENST00000475772 KLHL25Q9H0H3 589 aa10.11□□□□□ -0.79
CALD1-217ENST00000475772 ASB8Q9H765 288 aa10.11□□□□□ -0.79
CALD1-217ENST00000475772 SPTLC3Q9NUV7 552 aa10.11□□□□□ -0.79
CALD1-217ENST00000475772 DDX56Q9NY93 547 aaKnown RBP10.11□□□□□ -0.79
CALD1-217ENST00000475772 FAM8A1Q9UBU6 413 aa10.11□□□□□ -0.79
CALD1-217ENST00000475772 LRBAP50851 2863 aa10.11□□□□□ -0.79
CALD1-217ENST00000475772 PCM1Q15154 2024 aa10.11□□□□□ -0.79
CALD1-217ENST00000475772 CROCCQ5TZA2 2017 aa10.11□□□□□ -0.79
CALD1-217ENST00000475772 SYCE3A1L190 88 aa10.1□□□□□ -0.79
CALD1-217ENST00000475772 BTN3A1O00481 513 aa10.1□□□□□ -0.79
CALD1-217ENST00000475772 STX7O15400 261 aaKnown RBP10.1□□□□□ -0.79
CALD1-217ENST00000475772 CNOT3O75175 753 aaKnown RBP10.1□□□□□ -0.79
CALD1-217ENST00000475772 SRP72O76094 671 aaKnown RBP10.1□□□□□ -0.79
CALD1-217ENST00000475772 PRAMEF1O95521 474 aa10.1□□□□□ -0.79
CALD1-217ENST00000475772 CTSBP07858 339 aa10.1□□□□□ -0.79
CALD1-217ENST00000475772 CBSLP0DN79 551 aa10.1□□□□□ -0.79
CALD1-217ENST00000475772 PVRP15151 417 aa10.1□□□□□ -0.79
CALD1-217ENST00000475772 PDHA2P29803 388 aa10.1□□□□□ -0.79
CALD1-217ENST00000475772 CBSP35520 551 aa10.1□□□□□ -0.79
CALD1-217ENST00000475772 SLC1A1P43005 524 aa10.1□□□□□ -0.79
CALD1-217ENST00000475772 GABRA4P48169 554 aa10.1□□□□□ -0.79
CALD1-217ENST00000475772 PRLHRP49683 370 aa10.1□□□□□ -0.79
CALD1-217ENST00000475772 CDKN1CP49918 316 aaPredicted RBP10.1□□□□□ -0.79
CALD1-217ENST00000475772 FOXL2P58012 376 aa10.1□□□□□ -0.79
CALD1-217ENST00000475772 RAPSNQ13702 412 aa10.1□□□□□ -0.79
CALD1-217ENST00000475772 ATP1A4Q13733 1029 aa10.1□□□□□ -0.79
CALD1-217ENST00000475772 CDHR3Q6ZTQ4 885 aa10.1□□□□□ -0.79
CALD1-217ENST00000475772 BZW1Q7L1Q6 419 aaKnown RBP10.1□□□□□ -0.79
CALD1-217ENST00000475772 ADGRF3Q8IZF5 1079 aa10.1□□□□□ -0.79
CALD1-217ENST00000475772 INPP5DQ92835 1189 aa10.1□□□□□ -0.79
CALD1-217ENST00000475772 CLIP3Q96DZ5 547 aa10.1□□□□□ -0.79
CALD1-217ENST00000475772 VAT1Q99536 393 aa10.1□□□□□ -0.79
CALD1-217ENST00000475772 PITPNM3Q9BZ71 974 aa10.1□□□□□ -0.79
CALD1-217ENST00000475772 OR52A5Q9H2C5 316 aa10.1□□□□□ -0.79
CALD1-217ENST00000475772 GOLPH3Q9H4A6 298 aa10.1□□□□□ -0.79
CALD1-217ENST00000475772 ZNF552Q9H707 407 aaPredicted RBP10.1□□□□□ -0.79
CALD1-217ENST00000475772 ACTR5Q9H9F9 607 aaPredicted RBP10.1□□□□□ -0.79
CALD1-217ENST00000475772 ZBTB20Q9HC78 741 aaPredicted RBP10.1□□□□□ -0.79
CALD1-217ENST00000475772 FAM60AQ9NP50 221 aa10.1□□□□□ -0.79
CALD1-217ENST00000475772 SLAMF7Q9NQ25 335 aa10.1□□□□□ -0.79
CALD1-217ENST00000475772 ASF1BQ9NVP2 202 aa10.1□□□□□ -0.79
CALD1-217ENST00000475772 SOHLH2Q9NX45 425 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms