RNA–Protein interactions for RNA: ENST00000474871.5

NPHP3-206, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 4,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-206ENST00000474871 SERPINB11Q96P15 392 aa4.78□□□□□ -1.64
NPHP3-206ENST00000474871 LRRC37BQ96QE4 947 aa4.78□□□□□ -1.64
NPHP3-206ENST00000474871 CRAMP1Q96RY5 1269 aa4.78□□□□□ -1.64
NPHP3-206ENST00000474871 SPSB2Q99619 263 aa4.78□□□□□ -1.64
NPHP3-206ENST00000474871 KAT8Q9H7Z6 458 aaKnown RBP4.78□□□□□ -1.64
NPHP3-206ENST00000474871 ACSL5Q9ULC5 683 aa4.78□□□□□ -1.64
NPHP3-206ENST00000474871 TP53TG5Q9Y2B4 290 aa4.78□□□□□ -1.64
NPHP3-206ENST00000474871 FAM196BA6NMK8 535 aa4.78□□□□□ -1.64
NPHP3-206ENST00000474871 C2orf74A8MZ97 194 aa4.78□□□□□ -1.64
NPHP3-206ENST00000474871 SAP30O75446 220 aa4.78□□□□□ -1.64
NPHP3-206ENST00000474871 MOCS2O96007 188 aaPredicted RBP4.78□□□□□ -1.64
NPHP3-206ENST00000474871 DHRS4L1P0CG22 281 aa4.78□□□□□ -1.64
NPHP3-206ENST00000474871 SMIM6P0DI80 62 aa4.78□□□□□ -1.64
NPHP3-206ENST00000474871 EPHX2P34913 555 aa4.78□□□□□ -1.64
NPHP3-206ENST00000474871 TGFBR2P37173 567 aa4.78□□□□□ -1.64
NPHP3-206ENST00000474871 ID4P47928 161 aa4.78□□□□□ -1.64
NPHP3-206ENST00000474871 SMSP52788 366 aa4.78□□□□□ -1.64
NPHP3-206ENST00000474871 PMS1P54277 932 aaKnown RBP4.78□□□□□ -1.64
NPHP3-206ENST00000474871 PKNOX1P55347 436 aa4.78□□□□□ -1.64
NPHP3-206ENST00000474871 DLX5P56178 289 aa4.78□□□□□ -1.64
NPHP3-206ENST00000474871 GUCA2AQ02747 115 aa4.78□□□□□ -1.64
NPHP3-206ENST00000474871 SLAMF1Q13291 335 aa4.78□□□□□ -1.64
NPHP3-206ENST00000474871 SEC23AQ15436 765 aa4.78□□□□□ -1.64
NPHP3-206ENST00000474871 PPP1R3AQ16821 1122 aa4.78□□□□□ -1.64
NPHP3-206ENST00000474871 TYSND1Q2T9J0 566 aa4.78□□□□□ -1.64
NPHP3-206ENST00000474871 HKDC1Q2TB90 917 aa4.78□□□□□ -1.64
NPHP3-206ENST00000474871 OR2B11Q5JQS5 317 aa4.78□□□□□ -1.64
NPHP3-206ENST00000474871 THSD4Q6ZMP0 1018 aa4.78□□□□□ -1.64
NPHP3-206ENST00000474871 SH2D5Q6ZV89 423 aa4.78□□□□□ -1.64
NPHP3-206ENST00000474871 FKBP9P1Q75LS8 142 aa4.78□□□□□ -1.64
NPHP3-206ENST00000474871 SLC13A5Q86YT5 568 aaPredicted RBP4.78□□□□□ -1.64
NPHP3-206ENST00000474871 DENND6AQ8IWF6 608 aa4.78□□□□□ -1.64
NPHP3-206ENST00000474871 ADGRF4Q8IZF3 695 aa4.78□□□□□ -1.64
NPHP3-206ENST00000474871 RAD9AQ99638 391 aa4.78□□□□□ -1.64
NPHP3-206ENST00000474871 DCLRE1BQ9H816 532 aa4.78□□□□□ -1.64
NPHP3-206ENST00000474871 LRRC40Q9H9A6 602 aa4.78□□□□□ -1.64
NPHP3-206ENST00000474871 UFSP2Q9NUQ7 469 aa4.78□□□□□ -1.64
NPHP3-206ENST00000474871 KCMF1Q9P0J7 381 aa4.78□□□□□ -1.64
NPHP3-206ENST00000474871 USP22Q9UPT9 525 aa4.78□□□□□ -1.64
NPHP3-206ENST00000474871 ERVW-1Q9UQF0 538 aa4.78□□□□□ -1.64
NPHP3-206ENST00000474871 PTGDR2Q9Y5Y4 395 aa4.78□□□□□ -1.64
NPHP3-206ENST00000474871 TEX264Q9Y6I9 313 aa4.78□□□□□ -1.64
NPHP3-206ENST00000474871 BAZ2AQ9UIF9 1905 aaKnown RBP4.78□□□□□ -1.64
NPHP3-206ENST00000474871 RFPL4AA6NLU0 287 aa4.78□□□□□ -1.64
NPHP3-206ENST00000474871 RFPL4AL1F8VTS6 287 aa4.78□□□□□ -1.64
NPHP3-206ENST00000474871 SELENOFO60613 162 aa4.78□□□□□ -1.64
NPHP3-206ENST00000474871 CELF2O95319 508 aaKnown RBP4.78□□□□□ -1.64
NPHP3-206ENST00000474871 CLUP10909 449 aa4.78□□□□□ -1.64
NPHP3-206ENST00000474871 TNNI1P19237 187 aa4.78□□□□□ -1.64
NPHP3-206ENST00000474871 MMP8P22894 467 aa4.78□□□□□ -1.64
NPHP3-206ENST00000474871 DYRK1AQ13627 763 aa4.78□□□□□ -1.64
NPHP3-206ENST00000474871 PDK4Q16654 411 aa4.78□□□□□ -1.64
NPHP3-206ENST00000474871 GARNL3Q5VVW2 1013 aa4.78□□□□□ -1.64
NPHP3-206ENST00000474871 FBXW9Q5XUX1 488 aa4.78□□□□□ -1.64
NPHP3-206ENST00000474871 PAGE2Q7Z2X7 111 aa4.78□□□□□ -1.64
NPHP3-206ENST00000474871 FGD2Q7Z6J4 655 aa4.78□□□□□ -1.64
NPHP3-206ENST00000474871 THNSL1Q8IYQ7 743 aa4.78□□□□□ -1.64
NPHP3-206ENST00000474871 OFCC1Q8IZS5 231 aa4.78□□□□□ -1.64
NPHP3-206ENST00000474871 PRSS35Q8N3Z0 413 aa4.78□□□□□ -1.64
NPHP3-206ENST00000474871 MARVELD2Q8N4S9 558 aa4.78□□□□□ -1.64
NPHP3-206ENST00000474871 METTL13Q8N6R0 699 aa4.78□□□□□ -1.64
NPHP3-206ENST00000474871 C12orf76Q8N812 135 aaPredicted RBP4.78□□□□□ -1.64
NPHP3-206ENST00000474871 RNASE8Q8TDE3 154 aaKnown RBP4.78□□□□□ -1.64
NPHP3-206ENST00000474871 GTF2H4Q92759 462 aa4.78□□□□□ -1.64
NPHP3-206ENST00000474871 SLC25A36Q96CQ1 311 aa4.78□□□□□ -1.64
NPHP3-206ENST00000474871 MISP3Q96FF7 219 aa4.78□□□□□ -1.64
NPHP3-206ENST00000474871 CNBD2Q96M20 576 aa4.78□□□□□ -1.64
NPHP3-206ENST00000474871 CNPY3Q9BT09 278 aa4.78□□□□□ -1.64
NPHP3-206ENST00000474871 ZNF416Q9BWM5 594 aa4.78□□□□□ -1.64
NPHP3-206ENST00000474871 AMNQ9BXJ7 453 aa4.78□□□□□ -1.64
NPHP3-206ENST00000474871 CATSPERBQ9H7T0 1116 aa4.78□□□□□ -1.64
NPHP3-206ENST00000474871 ETNK1Q9HBU6 452 aa4.78□□□□□ -1.64
NPHP3-206ENST00000474871 TMEM160Q9NX00 188 aa4.78□□□□□ -1.64
NPHP3-206ENST00000474871 SMPXQ9UHP9 88 aa4.78□□□□□ -1.64
NPHP3-206ENST00000474871 PACSIN2Q9UNF0 486 aaPredicted RBP4.78□□□□□ -1.64
NPHP3-206ENST00000474871 HIF3AQ9Y2N7 669 aa4.78□□□□□ -1.64
NPHP3-206ENST00000474871 FAM205AQ6ZU69 1335 aa4.78□□□□□ -1.64
NPHP3-206ENST00000474871 MEI4A8MW99 385 aa4.78□□□□□ -1.65
NPHP3-206ENST00000474871 ADAMDEC1O15204 470 aa4.78□□□□□ -1.65
NPHP3-206ENST00000474871 AKAP8O43823 692 aaKnown RBP4.78□□□□□ -1.65
NPHP3-206ENST00000474871 ARSBP15848 533 aa4.78□□□□□ -1.65
NPHP3-206ENST00000474871 ITIH1P19827 911 aa4.78□□□□□ -1.65
NPHP3-206ENST00000474871 STX1BP61266 288 aa4.78□□□□□ -1.65
NPHP3-206ENST00000474871 SLC34A1Q06495 639 aa4.78□□□□□ -1.65
NPHP3-206ENST00000474871 SREBF2Q12772 1141 aa4.78□□□□□ -1.65
NPHP3-206ENST00000474871 DPYDQ12882 1025 aa4.78□□□□□ -1.65
NPHP3-206ENST00000474871 TUBB2AQ13885 445 aa4.78□□□□□ -1.65
NPHP3-206ENST00000474871 GRIN2CQ14957 1233 aa4.78□□□□□ -1.65
NPHP3-206ENST00000474871 FAM110CQ1W6H9 321 aa4.78□□□□□ -1.65
NPHP3-206ENST00000474871 DEFB115Q30KQ5 88 aa4.78□□□□□ -1.65
NPHP3-206ENST00000474871 PABPC1L2AQ5JQF8 200 aa4.78□□□□□ -1.65
NPHP3-206ENST00000474871 IRAK1BP1Q5VVH5 260 aa4.78□□□□□ -1.65
NPHP3-206ENST00000474871 BHLHB9Q6PI77 547 aa4.78□□□□□ -1.65
NPHP3-206ENST00000474871 VHLLQ6RSH7 139 aa4.78□□□□□ -1.65
NPHP3-206ENST00000474871 POLNQ7Z5Q5 900 aa4.78□□□□□ -1.65
NPHP3-206ENST00000474871 DEFB132Q7Z7B7 95 aa4.78□□□□□ -1.65
NPHP3-206ENST00000474871 ETNPPLQ8TBG4 499 aa4.78□□□□□ -1.65
NPHP3-206ENST00000474871 DUSP19Q8WTR2 217 aa4.78□□□□□ -1.65
NPHP3-206ENST00000474871 PACRGQ96M98 296 aaPredicted RBP4.78□□□□□ -1.65
NPHP3-206ENST00000474871 SLC46A1Q96NT5 459 aa4.78□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms