RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 MS4A2Q01362 244 aa21.24■□□□□ 0.99
CCM2-206ENST00000474617 NFYCQ13952 458 aa21.24■□□□□ 0.99
CCM2-206ENST00000474617 AASDHQ4L235 1098 aaPredicted RBP21.24■□□□□ 0.99
CCM2-206ENST00000474617 ATAT1Q5SQI0 421 aa21.24■□□□□ 0.99
CCM2-206ENST00000474617 AQP12AQ8IXF9 295 aa21.24■□□□□ 0.99
CCM2-206ENST00000474617 SNX31Q8N9S9 440 aa21.24■□□□□ 0.99
CCM2-206ENST00000474617 PROKR1Q8TCW9 393 aa21.24■□□□□ 0.99
CCM2-206ENST00000474617 ECSITQ9BQ95 431 aa21.24■□□□□ 0.99
CCM2-206ENST00000474617 SLC28A3Q9HAS3 691 aa21.24■□□□□ 0.99
CCM2-206ENST00000474617 LRTM1Q9HBL6 345 aa21.24■□□□□ 0.99
CCM2-206ENST00000474617 C1orf109Q9NX04 203 aa21.24■□□□□ 0.99
CCM2-206ENST00000474617 KLQ9UEF7 1012 aa21.24■□□□□ 0.99
CCM2-206ENST00000474617 GIMAP2Q9UG22 337 aa21.24■□□□□ 0.99
CCM2-206ENST00000474617 MKI67P46013 3256 aaKnown RBP21.24■□□□□ 0.99
CCM2-206ENST00000474617 PDE4DIPQ5VU43 2346 aa21.24■□□□□ 0.99
CCM2-206ENST00000474617 KANSL1LA0AUZ9 987 aa21.24■□□□□ 0.99
CCM2-206ENST00000474617 LZTS3O60299 673 aaPredicted RBP21.24■□□□□ 0.99
CCM2-206ENST00000474617 RECQL5O94762 991 aaPredicted RBP21.24■□□□□ 0.99
CCM2-206ENST00000474617 RPSAP08865 295 aaKnown RBP21.24■□□□□ 0.99
CCM2-206ENST00000474617 GJA4P35212 333 aa21.24■□□□□ 0.99
CCM2-206ENST00000474617 OPRD1P41143 372 aa21.24■□□□□ 0.99
CCM2-206ENST00000474617 GDF5P43026 501 aa21.24■□□□□ 0.99
CCM2-206ENST00000474617 HTR6P50406 440 aa21.24■□□□□ 0.99
CCM2-206ENST00000474617 OGFRL1Q5TC84 451 aaPredicted RBP21.24■□□□□ 0.99
CCM2-206ENST00000474617 IL23RQ5VWK5 629 aa21.24■□□□□ 0.99
CCM2-206ENST00000474617 TANGO2Q6ICL3 276 aa21.24■□□□□ 0.99
CCM2-206ENST00000474617 SPATA24Q86W54 205 aa21.24■□□□□ 0.99
CCM2-206ENST00000474617 DHFR2Q86XF0 187 aa21.24■□□□□ 0.99
CCM2-206ENST00000474617 HIPK4Q8NE63 616 aa21.24■□□□□ 0.99
CCM2-206ENST00000474617 ADCY4Q8NFM4 1077 aa21.24■□□□□ 0.99
CCM2-206ENST00000474617 CXorf40AQ8TE69 158 aa21.24■□□□□ 0.99
CCM2-206ENST00000474617 POP5Q969H6 163 aaKnown RBP21.24■□□□□ 0.99
CCM2-206ENST00000474617 ZFYVE19Q96K21 471 aa21.24■□□□□ 0.99
CCM2-206ENST00000474617 BTBD9Q96Q07 612 aa21.24■□□□□ 0.99
CCM2-206ENST00000474617 VCXQ9H320 206 aa21.24■□□□□ 0.99
CCM2-206ENST00000474617 MTG2Q9H4K7 406 aa21.24■□□□□ 0.99
CCM2-206ENST00000474617 ELOVL6Q9H5J4 265 aa21.24■□□□□ 0.99
CCM2-206ENST00000474617 TRIM39Q9HCM9 518 aa21.24■□□□□ 0.99
CCM2-206ENST00000474617 GPRC5BQ9NZH0 403 aa21.24■□□□□ 0.99
CCM2-206ENST00000474617 PRSS51A0A1B0GVH4 220 aa21.23■□□□□ 0.99
CCM2-206ENST00000474617 TCRBV3S1A0A5B6 114 aa21.23■□□□□ 0.99
CCM2-206ENST00000474617 FXYD1O00168 92 aa21.23■□□□□ 0.99
CCM2-206ENST00000474617 SPINT1O43278 529 aa21.23■□□□□ 0.99
CCM2-206ENST00000474617 TSPAN6O43657 245 aa21.23■□□□□ 0.99
CCM2-206ENST00000474617 RNASEH1O60930 286 aaKnown RBP21.23■□□□□ 0.99
CCM2-206ENST00000474617 KAT7O95251 611 aa21.23■□□□□ 0.99
CCM2-206ENST00000474617 APODP05090 189 aa21.23■□□□□ 0.99
CCM2-206ENST00000474617 IL6P05231 212 aa21.23■□□□□ 0.99
CCM2-206ENST00000474617 C6P13671 934 aa21.23■□□□□ 0.99
CCM2-206ENST00000474617 HSD3B1P14060 373 aa21.23■□□□□ 0.99
CCM2-206ENST00000474617 SLC6A2P23975 617 aa21.23■□□□□ 0.99
CCM2-206ENST00000474617 HSD3B2P26439 372 aa21.23■□□□□ 0.99
CCM2-206ENST00000474617 GPR1P46091 355 aa21.23■□□□□ 0.99
CCM2-206ENST00000474617 CLNS1AP54105 237 aaKnown RBP21.23■□□□□ 0.99
CCM2-206ENST00000474617 UFM1P61960 85 aa21.23■□□□□ 0.99
CCM2-206ENST00000474617 MRPS35P82673 323 aaKnown RBP21.23■□□□□ 0.99
CCM2-206ENST00000474617 ENPP2Q13822 863 aa21.23■□□□□ 0.99
CCM2-206ENST00000474617 TLR1Q15399 786 aa21.23■□□□□ 0.99
CCM2-206ENST00000474617 PTCHD3Q3KNS1 767 aa21.23■□□□□ 0.99
CCM2-206ENST00000474617 CES5AQ6NT32 575 aa21.23■□□□□ 0.99
CCM2-206ENST00000474617 AADATQ8N5Z0 425 aa21.23■□□□□ 0.99
CCM2-206ENST00000474617 EFCAB3Q8N7B9 438 aa21.23■□□□□ 0.99
CCM2-206ENST00000474617 NR1H4Q96RI1 486 aaPredicted RBP21.23■□□□□ 0.99
CCM2-206ENST00000474617 NKX2-4Q9H2Z4 354 aa21.23■□□□□ 0.99
CCM2-206ENST00000474617 CNOT11Q9UKZ1 510 aaKnown RBP21.23■□□□□ 0.99
CCM2-206ENST00000474617 RNF11Q9Y3C5 154 aa21.23■□□□□ 0.99
CCM2-206ENST00000474617 ANKRD12Q6UB98 2062 aa21.23■□□□□ 0.99
CCM2-206ENST00000474617 OTOL1A6NHN0 477 aaPredicted RBP21.22■□□□□ 0.99
CCM2-206ENST00000474617 SLC2A4P14672 509 aa21.22■□□□□ 0.99
CCM2-206ENST00000474617 JUPP14923 745 aa21.22■□□□□ 0.99
CCM2-206ENST00000474617 VARSP26640 1264 aaKnown RBP21.22■□□□□ 0.99
CCM2-206ENST00000474617 TEAD1P28347 426 aa21.22■□□□□ 0.99
CCM2-206ENST00000474617 SLC7A1P30825 629 aa21.22■□□□□ 0.99
CCM2-206ENST00000474617 HNF4AP41235 474 aa21.22■□□□□ 0.99
CCM2-206ENST00000474617 ZFP36L2P47974 494 aaKnown RBP21.22■□□□□ 0.99
CCM2-206ENST00000474617 HSPA13P48723 471 aa21.22■□□□□ 0.99
CCM2-206ENST00000474617 NME5P56597 212 aa21.22■□□□□ 0.99
CCM2-206ENST00000474617 MRPS22P82650 360 aaKnown RBP21.22■□□□□ 0.99
CCM2-206ENST00000474617 CSTF3Q12996 717 aaKnown RBP21.22■□□□□ 0.99
CCM2-206ENST00000474617 ADGRE1Q14246 886 aa21.22■□□□□ 0.99
CCM2-206ENST00000474617 TRIP10Q15642 601 aa21.22■□□□□ 0.99
CCM2-206ENST00000474617 TMEM220Q6QAJ8 160 aa21.22■□□□□ 0.99
CCM2-206ENST00000474617 SCIMPQ6UWF3 145 aa21.22■□□□□ 0.99
CCM2-206ENST00000474617 IZUMO2Q6UXV1 221 aa21.22■□□□□ 0.99
CCM2-206ENST00000474617 ADAMTSL4Q6UY14 1074 aa21.22■□□□□ 0.99
CCM2-206ENST00000474617 VRK3Q8IV63 474 aa21.22■□□□□ 0.99
CCM2-206ENST00000474617 SLC15A3Q8IY34 581 aa21.22■□□□□ 0.99
CCM2-206ENST00000474617 ZNF366Q8N895 744 aa21.22■□□□□ 0.99
CCM2-206ENST00000474617 NAT14Q8WUY8 206 aa21.22■□□□□ 0.99
CCM2-206ENST00000474617 P2RY13Q9BPV8 354 aa21.22■□□□□ 0.99
CCM2-206ENST00000474617 WRAP53Q9BUR4 548 aaKnown RBP21.22■□□□□ 0.99
CCM2-206ENST00000474617 C1orf50Q9BV19 199 aa21.22■□□□□ 0.99
CCM2-206ENST00000474617 DPEP2Q9H4A9 486 aa21.22■□□□□ 0.99
CCM2-206ENST00000474617 FBRSQ9HAH7 460 aa21.22■□□□□ 0.99
CCM2-206ENST00000474617 ACTR3BQ9P1U1 418 aa21.22■□□□□ 0.99
CCM2-206ENST00000474617 MAPRE3Q9UPY8 281 aa21.22■□□□□ 0.99
CCM2-206ENST00000474617 PCDHA9Q9Y5H5 950 aa21.22■□□□□ 0.99
CCM2-206ENST00000474617 KCNE1BA0A087WTH5 132 aa21.21■□□□□ 0.99
CCM2-206ENST00000474617 OR2AG2A6NM03 316 aa21.21■□□□□ 0.99
CCM2-206ENST00000474617 GPR89AB7ZAQ6 455 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms