RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 GNPDA1P46926 289 aa9.58□□□□□ -0.88
USP39-214ENST00000474572 KRT6CP48668 564 aa9.58□□□□□ -0.88
USP39-214ENST00000474572 GSK3BP49841 420 aa9.58□□□□□ -0.88
USP39-214ENST00000474572 ELP6Q0PNE2 266 aa9.58□□□□□ -0.88
USP39-214ENST00000474572 HSPA14Q0VDF9 509 aa9.58□□□□□ -0.88
USP39-214ENST00000474572 MESP2Q0VG99 397 aa9.58□□□□□ -0.88
USP39-214ENST00000474572 CAPRIN1Q14444 709 aaKnown RBP9.58□□□□□ -0.88
USP39-214ENST00000474572 PDGFRLQ15198 375 aa9.58□□□□□ -0.88
USP39-214ENST00000474572 MAP7D1Q3KQU3 841 aa9.58□□□□□ -0.88
USP39-214ENST00000474572 GRAMD1BQ3KR37 738 aa9.58□□□□□ -0.88
USP39-214ENST00000474572 TMEM52BQ4KMG9 183 aa9.58□□□□□ -0.88
USP39-214ENST00000474572 BCL7AQ4VC05 210 aa9.58□□□□□ -0.88
USP39-214ENST00000474572 USP39Q53GS9 565 aaKnown RBP9.58□□□□□ -0.88
USP39-214ENST00000474572 C9orf64Q5T6V5 341 aa9.58□□□□□ -0.88
USP39-214ENST00000474572 FAM109BQ6ICB4 259 aaPredicted RBP9.58□□□□□ -0.88
USP39-214ENST00000474572 DLEU7Q6UYE1 221 aa9.58□□□□□ -0.88
USP39-214ENST00000474572 DET1Q7L5Y6 550 aa9.58□□□□□ -0.88
USP39-214ENST00000474572 DHFR2Q86XF0 187 aa9.58□□□□□ -0.88
USP39-214ENST00000474572 KIAA2013Q8IYS2 634 aa9.58□□□□□ -0.88
USP39-214ENST00000474572 RGL4Q8IZJ4 473 aa9.58□□□□□ -0.88
USP39-214ENST00000474572 MARVELD2Q8N4S9 558 aa9.58□□□□□ -0.88
USP39-214ENST00000474572 RASGEF1AQ8N9B8 481 aa9.58□□□□□ -0.88
USP39-214ENST00000474572 PAPD5Q8NDF8 572 aaKnown RBP9.58□□□□□ -0.88
USP39-214ENST00000474572 VN1R2Q8NFZ6 395 aa9.58□□□□□ -0.88
USP39-214ENST00000474572 ASZ1Q8WWH4 475 aa9.58□□□□□ -0.88
USP39-214ENST00000474572 OR8D1Q8WZ84 308 aa9.58□□□□□ -0.88
USP39-214ENST00000474572 ELMO1Q92556 727 aa9.58□□□□□ -0.88
USP39-214ENST00000474572 VPS33AQ96AX1 596 aa9.58□□□□□ -0.88
USP39-214ENST00000474572 HIST1H2AHQ96KK5 128 aa9.58□□□□□ -0.88
USP39-214ENST00000474572 HHIPQ96QV1 700 aa9.58□□□□□ -0.88
USP39-214ENST00000474572 CDCA3Q99618 268 aaPredicted RBP9.58□□□□□ -0.88
USP39-214ENST00000474572 HIST1H2AJQ99878 128 aa9.58□□□□□ -0.88
USP39-214ENST00000474572 H2AFJQ9BTM1 129 aa9.58□□□□□ -0.88
USP39-214ENST00000474572 TRIM15Q9C019 465 aa9.58□□□□□ -0.88
USP39-214ENST00000474572 HPS4Q9NQG7 708 aa9.58□□□□□ -0.88
USP39-214ENST00000474572 FARSBQ9NSD9 589 aaKnown RBP9.58□□□□□ -0.88
USP39-214ENST00000474572 CCM2LQ9NUG4 571 aaPredicted RBP9.58□□□□□ -0.88
USP39-214ENST00000474572 DNAJC11Q9NVH1 559 aa9.58□□□□□ -0.88
USP39-214ENST00000474572 DZANK1Q9NVP4 752 aa9.58□□□□□ -0.88
USP39-214ENST00000474572 GMPR2Q9P2T1 348 aaKnown RBP9.58□□□□□ -0.88
USP39-214ENST00000474572 KLQ9UEF7 1012 aa9.58□□□□□ -0.88
USP39-214ENST00000474572 ZNF490Q9ULM2 529 aaPredicted RBP9.58□□□□□ -0.88
USP39-214ENST00000474572 CNOT6Q9ULM6 557 aaKnown RBP9.58□□□□□ -0.88
USP39-214ENST00000474572 RAB26Q9ULW5 256 aa9.58□□□□□ -0.88
USP39-214ENST00000474572 EIF3LQ9Y262 564 aaKnown RBP9.58□□□□□ -0.88
USP39-214ENST00000474572 HEPACAM2A8MVW5 462 aa9.57□□□□□ -0.88
USP39-214ENST00000474572 GRXCR1A8MXD5 290 aa9.57□□□□□ -0.88
USP39-214ENST00000474572 NPC1O15118 1278 aa9.57□□□□□ -0.88
USP39-214ENST00000474572 PRAMEF4O60810 478 aa9.57□□□□□ -0.88
USP39-214ENST00000474572 LILRB5O75023 590 aa9.57□□□□□ -0.88
USP39-214ENST00000474572 ATG13O75143 517 aa9.57□□□□□ -0.88
USP39-214ENST00000474572 MTX2O75431 263 aa9.57□□□□□ -0.88
USP39-214ENST00000474572 STAMBPO95630 424 aa9.57□□□□□ -0.88
USP39-214ENST00000474572 GPIP06744 558 aa9.57□□□□□ -0.88
USP39-214ENST00000474572 LYNP07948 512 aa9.57□□□□□ -0.88
USP39-214ENST00000474572 ZNF26P17031 533 aaPredicted RBP9.57□□□□□ -0.88
USP39-214ENST00000474572 FSHRP23945 695 aa9.57□□□□□ -0.88
USP39-214ENST00000474572 SLC6A11P48066 632 aa9.57□□□□□ -0.88
USP39-214ENST00000474572 HSPA13P48723 471 aa9.57□□□□□ -0.88
USP39-214ENST00000474572 CTSCP53634 463 aa9.57□□□□□ -0.88
USP39-214ENST00000474572 ATXN3P54252 364 aaPredicted RBP9.57□□□□□ -0.88
USP39-214ENST00000474572 PFN3P60673 137 aa9.57□□□□□ -0.88
USP39-214ENST00000474572 RPL38P63173 70 aaKnown RBP9.57□□□□□ -0.88
USP39-214ENST00000474572 DPTQ07507 201 aa9.57□□□□□ -0.88
USP39-214ENST00000474572 TMEM115Q12893 351 aaPredicted RBP9.57□□□□□ -0.88
USP39-214ENST00000474572 PWP1Q13610 501 aa9.57□□□□□ -0.88
USP39-214ENST00000474572 GRM2Q14416 872 aa9.57□□□□□ -0.88
USP39-214ENST00000474572 ELAVL3Q14576 367 aaKnown RBP9.57□□□□□ -0.88
USP39-214ENST00000474572 PTCHD3Q3KNS1 767 aa9.57□□□□□ -0.88
USP39-214ENST00000474572 TIGD2Q4W5G0 525 aa9.57□□□□□ -0.88
USP39-214ENST00000474572 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.57□□□□□ -0.88
USP39-214ENST00000474572 PRAMEF9Q5VWM5 478 aa9.57□□□□□ -0.88
USP39-214ENST00000474572 LIPJQ5W064 366 aa9.57□□□□□ -0.88
USP39-214ENST00000474572 NANOGP8Q6NSW7 305 aa9.57□□□□□ -0.88
USP39-214ENST00000474572 HMBOX1Q6NT76 420 aa9.57□□□□□ -0.88
USP39-214ENST00000474572 FBXL19Q6PCT2 694 aa9.57□□□□□ -0.88
USP39-214ENST00000474572 SLC2A7Q6PXP3 512 aa9.57□□□□□ -0.88
USP39-214ENST00000474572 SUSD1Q6UWL2 747 aa9.57□□□□□ -0.88
USP39-214ENST00000474572 XKR5Q6UX68 686 aa9.57□□□□□ -0.88
USP39-214ENST00000474572 ERMP1Q7Z2K6 904 aa9.57□□□□□ -0.88
USP39-214ENST00000474572 RBM23Q86U06 439 aaKnown RBP9.57□□□□□ -0.88
USP39-214ENST00000474572 HID1Q8IV36 788 aa9.57□□□□□ -0.88
USP39-214ENST00000474572 SLC22A15Q8IZD6 547 aa9.57□□□□□ -0.88
USP39-214ENST00000474572 ADGRG5Q8IZF4 528 aa9.57□□□□□ -0.88
USP39-214ENST00000474572 C12orf76Q8N812 135 aaPredicted RBP9.57□□□□□ -0.88
USP39-214ENST00000474572 ANKFN1Q8N957 763 aa9.57□□□□□ -0.88
USP39-214ENST00000474572 TERB1Q8NA31 727 aa9.57□□□□□ -0.88
USP39-214ENST00000474572 ICA1LQ8NDH6 482 aa9.57□□□□□ -0.88
USP39-214ENST00000474572 OR8J3Q8NGG0 315 aa9.57□□□□□ -0.88
USP39-214ENST00000474572 PIP4K2CQ8TBX8 421 aa9.57□□□□□ -0.88
USP39-214ENST00000474572 MCOLN3Q8TDD5 553 aa9.57□□□□□ -0.88
USP39-214ENST00000474572 FGF13Q92913 245 aa9.57□□□□□ -0.88
USP39-214ENST00000474572 AP2M1Q96CW1 435 aa9.57□□□□□ -0.88
USP39-214ENST00000474572 LINC00615Q96LM1 132 aaPredicted RBP9.57□□□□□ -0.88
USP39-214ENST00000474572 FAM129BQ96TA1 746 aa9.57□□□□□ -0.88
USP39-214ENST00000474572 HBEGFQ99075 208 aa9.57□□□□□ -0.88
USP39-214ENST00000474572 P2RY13Q9BPV8 354 aa9.57□□□□□ -0.88
USP39-214ENST00000474572 EFHD1Q9BUP0 239 aa9.57□□□□□ -0.88
USP39-214ENST00000474572 ACPTQ9BZG2 426 aa9.57□□□□□ -0.88
USP39-214ENST00000474572 ALG2Q9H553 416 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms