RNA–Protein interactions for RNA: ENST00000474384.2

SNRPB-203, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

TSL 5

Gene SNRPB, Length 985 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-203ENST00000474384 RAB10P61026 200 aa17.61■□□□□ 0.41
SNRPB-203ENST00000474384 GRB7Q14451 532 aa17.61■□□□□ 0.41
SNRPB-203ENST00000474384 LRRC8EQ6NSJ5 796 aa17.61■□□□□ 0.41
SNRPB-203ENST00000474384 TMPRSS7Q7RTY8 843 aa17.61■□□□□ 0.41
SNRPB-203ENST00000474384 CMC1Q7Z7K0 106 aa17.61■□□□□ 0.41
SNRPB-203ENST00000474384 AMIGO1Q86WK6 493 aa17.61■□□□□ 0.41
SNRPB-203ENST00000474384 TMPRSS12Q86WS5 348 aa17.61■□□□□ 0.41
SNRPB-203ENST00000474384 MARCH9Q86YJ5 346 aa17.61■□□□□ 0.41
SNRPB-203ENST00000474384 MYO1HQ8N1T3 1032 aa17.61■□□□□ 0.41
SNRPB-203ENST00000474384 ANKRD49Q8WVL7 239 aa17.61■□□□□ 0.41
SNRPB-203ENST00000474384 ASB11Q8WXH4 323 aa17.61■□□□□ 0.41
SNRPB-203ENST00000474384 CAVIN3Q969G5 261 aa17.61■□□□□ 0.41
SNRPB-203ENST00000474384 RAD51AP1Q96B01 352 aa17.61■□□□□ 0.41
SNRPB-203ENST00000474384 SYTL2Q9HCH5 934 aa17.61■□□□□ 0.41
SNRPB-203ENST00000474384 HRASLS2Q9NWW9 162 aa17.61■□□□□ 0.41
SNRPB-203ENST00000474384 TMEM9Q9P0T7 183 aa17.61■□□□□ 0.41
SNRPB-203ENST00000474384 ICKQ9UPZ9 632 aa17.61■□□□□ 0.41
SNRPB-203ENST00000474384 COL27A1Q8IZC6 1860 aaPredicted RBP17.61■□□□□ 0.41
SNRPB-203ENST00000474384 ARHGEF33A8MVX0 844 aa17.6■□□□□ 0.41
SNRPB-203ENST00000474384 GFYI3L273 518 aa17.6■□□□□ 0.41
SNRPB-203ENST00000474384 CATP04040 527 aaKnown RBP17.6■□□□□ 0.41
SNRPB-203ENST00000474384 SHBGP04278 402 aa17.6■□□□□ 0.41
SNRPB-203ENST00000474384 CCNFP41002 786 aa17.6■□□□□ 0.41
SNRPB-203ENST00000474384 CAPZBP47756 277 aa17.6■□□□□ 0.41
SNRPB-203ENST00000474384 SERPINB9P50453 376 aa17.6■□□□□ 0.41
SNRPB-203ENST00000474384 ZKSCAN8Q15776 578 aaPredicted RBP17.6■□□□□ 0.41
SNRPB-203ENST00000474384 CLPPQ16740 277 aaPredicted RBP17.6■□□□□ 0.41
SNRPB-203ENST00000474384 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.6■□□□□ 0.41
SNRPB-203ENST00000474384 KLHL35Q6PF15 583 aa17.6■□□□□ 0.41
SNRPB-203ENST00000474384 WDR74Q6RFH5 385 aaPredicted RBP17.6■□□□□ 0.41
SNRPB-203ENST00000474384 UBE2R2Q712K3 238 aaPredicted RBP17.6■□□□□ 0.41
SNRPB-203ENST00000474384 B3GNT8Q7Z7M8 397 aa17.6■□□□□ 0.41
SNRPB-203ENST00000474384 GALNT15Q8N3T1 639 aa17.6■□□□□ 0.41
SNRPB-203ENST00000474384 NKAPQ8N5F7 415 aaKnown RBP17.6■□□□□ 0.41
SNRPB-203ENST00000474384 MAGEC3Q8TD91 643 aa17.6■□□□□ 0.41
SNRPB-203ENST00000474384 PDLIM5Q96HC4 596 aaKnown RBP17.6■□□□□ 0.41
SNRPB-203ENST00000474384 DEPDC7Q96QD5 511 aa17.6■□□□□ 0.41
SNRPB-203ENST00000474384 CCDC77Q9BR77 488 aa17.6■□□□□ 0.41
SNRPB-203ENST00000474384 DHRS4Q9BTZ2 278 aa17.6■□□□□ 0.41
SNRPB-203ENST00000474384 SEMA6CQ9H3T2 930 aa17.6■□□□□ 0.41
SNRPB-203ENST00000474384 ZNF180Q9UJW8 692 aa17.6■□□□□ 0.41
SNRPB-203ENST00000474384 ADAMTS6Q9UKP5 1117 aa17.6■□□□□ 0.41
SNRPB-203ENST00000474384 PTPRBP23467 1997 aa17.6■□□□□ 0.41
SNRPB-203ENST00000474384 OR5K3A6NET4 321 aa17.59■□□□□ 0.41
SNRPB-203ENST00000474384 BTN3A3O00478 584 aa17.59■□□□□ 0.41
SNRPB-203ENST00000474384 ZBTB14O43829 449 aa17.59■□□□□ 0.41
SNRPB-203ENST00000474384 KDM1AO60341 852 aa17.59■□□□□ 0.41
SNRPB-203ENST00000474384 CSO75390 466 aaKnown RBP17.59■□□□□ 0.41
SNRPB-203ENST00000474384 WISP3O95389 354 aaPredicted RBP17.59■□□□□ 0.41
SNRPB-203ENST00000474384 POLR2CP19387 275 aaPredicted RBP17.59■□□□□ 0.41
SNRPB-203ENST00000474384 SHMT2P34897 504 aa17.59■□□□□ 0.41
SNRPB-203ENST00000474384 GMPRP36959 345 aa17.59■□□□□ 0.41
SNRPB-203ENST00000474384 PDX1P52945 283 aa17.59■□□□□ 0.41
SNRPB-203ENST00000474384 GFERP55789 205 aa17.59■□□□□ 0.41
SNRPB-203ENST00000474384 PPP1CAP62136 330 aa17.59■□□□□ 0.41
SNRPB-203ENST00000474384 TARDBPQ13148 414 aaKnown RBP eCLIP17.59■□□□□ 0.41
SNRPB-203ENST00000474384 ISXQ2M1V0 245 aa17.59■□□□□ 0.41
SNRPB-203ENST00000474384 IRGCQ6NXR0 463 aa17.59■□□□□ 0.41
SNRPB-203ENST00000474384 TMEM71Q6P5X7 295 aa17.59■□□□□ 0.41
SNRPB-203ENST00000474384 RAPH1Q70E73 1250 aa17.59■□□□□ 0.41
SNRPB-203ENST00000474384 TAOK1Q7L7X3 1001 aa17.59■□□□□ 0.41
SNRPB-203ENST00000474384 OOSP2Q86WS3 158 aa17.59■□□□□ 0.41
SNRPB-203ENST00000474384 RASGRP3Q8IV61 690 aa17.59■□□□□ 0.41
SNRPB-203ENST00000474384 SPATA6LQ8N4H0 392 aa17.59■□□□□ 0.41
SNRPB-203ENST00000474384 DCBLD1Q8N8Z6 715 aa17.59■□□□□ 0.41
SNRPB-203ENST00000474384 LMNTD1Q8N9Z9 388 aa17.59■□□□□ 0.41
SNRPB-203ENST00000474384 OR4D9Q8NGE8 314 aa17.59■□□□□ 0.41
SNRPB-203ENST00000474384 DLG3Q92796 817 aa17.59■□□□□ 0.41
SNRPB-203ENST00000474384 IL17FQ96PD4 163 aa17.59■□□□□ 0.41
SNRPB-203ENST00000474384 TGM7Q96PF1 710 aa17.59■□□□□ 0.41
SNRPB-203ENST00000474384 IKZF3Q9UKT9 509 aa17.59■□□□□ 0.41
SNRPB-203ENST00000474384 IGHV5-10-1A0A0J9YXX1 117 aa17.58■□□□□ 0.4
SNRPB-203ENST00000474384 BTN3A1O00481 513 aa17.58■□□□□ 0.4
SNRPB-203ENST00000474384 RASGRF2O14827 1237 aa17.58■□□□□ 0.4
SNRPB-203ENST00000474384 CAPN5O15484 640 aaPredicted RBP17.58■□□□□ 0.4
SNRPB-203ENST00000474384 KRT38O76015 456 aa17.58■□□□□ 0.4
SNRPB-203ENST00000474384 SYF2O95926 243 aaKnown RBP17.58■□□□□ 0.4
SNRPB-203ENST00000474384 C8GP07360 202 aa17.58■□□□□ 0.4
SNRPB-203ENST00000474384 ADRB1P08588 477 aa17.58■□□□□ 0.4
SNRPB-203ENST00000474384 CCDC166P0CW27 439 aa17.58■□□□□ 0.4
SNRPB-203ENST00000474384 SPINK2P20155 84 aa17.58■□□□□ 0.4
SNRPB-203ENST00000474384 MAP4P27816 1152 aaKnown RBP17.58■□□□□ 0.4
SNRPB-203ENST00000474384 CRABP2P29373 138 aa17.58■□□□□ 0.4
SNRPB-203ENST00000474384 RAB28P51157 221 aa17.58■□□□□ 0.4
SNRPB-203ENST00000474384 SNAP47Q5SQN1 464 aa17.58■□□□□ 0.4
SNRPB-203ENST00000474384 PHF19Q5T6S3 580 aa17.58■□□□□ 0.4
SNRPB-203ENST00000474384 ARMC6Q6NXE6 501 aa17.58■□□□□ 0.4
SNRPB-203ENST00000474384 ADGRD1Q6QNK2 874 aa17.58■□□□□ 0.4
SNRPB-203ENST00000474384 PLXDC1Q8IUK5 500 aa17.58■□□□□ 0.4
SNRPB-203ENST00000474384 SLITRK4Q8IW52 837 aa17.58■□□□□ 0.4
SNRPB-203ENST00000474384 ADGRF3Q8IZF5 1079 aa17.58■□□□□ 0.4
SNRPB-203ENST00000474384 CACTIN-AS1Q8N1I8 211 aa17.58■□□□□ 0.4
SNRPB-203ENST00000474384 C2orf73Q8N5S3 287 aaPredicted RBP17.58■□□□□ 0.4
SNRPB-203ENST00000474384 OR9A1PQ8NGU1 263 aa17.58■□□□□ 0.4
SNRPB-203ENST00000474384 DPYSL5Q9BPU6 564 aa17.58■□□□□ 0.4
SNRPB-203ENST00000474384 MENTQ9BUN1 341 aa17.58■□□□□ 0.4
SNRPB-203ENST00000474384 UNKQ9C0B0 810 aaKnown RBP17.58■□□□□ 0.4
SNRPB-203ENST00000474384 SNX15Q9NRS6 342 aa17.58■□□□□ 0.4
SNRPB-203ENST00000474384 FETUBQ9UGM5 382 aa17.58■□□□□ 0.4
SNRPB-203ENST00000474384 KLHL3Q9UH77 587 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms