RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 TTC29Q8NA56 475 aaPredicted RBP18.25■□□□□ 0.51
ECHDC1-214ENST00000474289 OR52B6Q8NGF0 335 aa18.25■□□□□ 0.51
ECHDC1-214ENST00000474289 TRPM4Q8TD43 1214 aa18.25■□□□□ 0.51
ECHDC1-214ENST00000474289 IMP4Q96G21 291 aaKnown RBP18.25■□□□□ 0.51
ECHDC1-214ENST00000474289 ZFYVE19Q96K21 471 aa18.25■□□□□ 0.51
ECHDC1-214ENST00000474289 C1QTNF3Q9BXJ4 246 aa18.25■□□□□ 0.51
ECHDC1-214ENST00000474289 DERL2Q9GZP9 239 aa18.25■□□□□ 0.51
ECHDC1-214ENST00000474289 IRF2BPLQ9H1B7 796 aa18.25■□□□□ 0.51
ECHDC1-214ENST00000474289 CRTAC1Q9NQ79 661 aa18.25■□□□□ 0.51
ECHDC1-214ENST00000474289 MKLN1Q9UL63 735 aa18.25■□□□□ 0.51
ECHDC1-214ENST00000474289 FAM50BQ9Y247 325 aa18.25■□□□□ 0.51
ECHDC1-214ENST00000474289 CSADQ9Y600 493 aa18.25■□□□□ 0.51
ECHDC1-214ENST00000474289 UNCXA6NJT0 531 aa18.24■□□□□ 0.51
ECHDC1-214ENST00000474289 ERVH48-1M5A8F1 160 aa18.24■□□□□ 0.51
ECHDC1-214ENST00000474289 SERPINF2P08697 491 aa18.24■□□□□ 0.51
ECHDC1-214ENST00000474289 GPR50Q13585 617 aa18.24■□□□□ 0.51
ECHDC1-214ENST00000474289 RAB41Q5JT25 222 aa18.24■□□□□ 0.51
ECHDC1-214ENST00000474289 NEK5Q6P3R8 708 aa18.24■□□□□ 0.51
ECHDC1-214ENST00000474289 NRARPQ7Z6K4 114 aa18.24■□□□□ 0.51
ECHDC1-214ENST00000474289 PHACTR4Q8IZ21 702 aa18.24■□□□□ 0.51
ECHDC1-214ENST00000474289 OR56A4Q8NGH8 313 aa18.24■□□□□ 0.51
ECHDC1-214ENST00000474289 NETO1Q8TDF5 533 aa18.24■□□□□ 0.51
ECHDC1-214ENST00000474289 IPCEF1Q8WWN9 437 aaPredicted RBP18.24■□□□□ 0.51
ECHDC1-214ENST00000474289 AARSD1Q9BTE6 412 aaKnown RBP18.24■□□□□ 0.51
ECHDC1-214ENST00000474289 GABARAPL1Q9H0R8 117 aa18.24■□□□□ 0.51
ECHDC1-214ENST00000474289 NT5MQ9NPB1 228 aa18.24■□□□□ 0.51
ECHDC1-214ENST00000474289 TAS2R9Q9NYW1 312 aa18.24■□□□□ 0.51
ECHDC1-214ENST00000474289 CCDC59Q9P031 241 aaKnown RBP18.24■□□□□ 0.51
ECHDC1-214ENST00000474289 RAPGEFL1Q9UHV5 662 aa18.24■□□□□ 0.51
ECHDC1-214ENST00000474289 LOC100506127A0A0U1RQW1 187 aa18.24■□□□□ 0.51
ECHDC1-214ENST00000474289 NPEPPSL1A6NEC2 478 aa18.24■□□□□ 0.51
ECHDC1-214ENST00000474289 H3BQ06 376 aaPredicted RBP18.24■□□□□ 0.51
ECHDC1-214ENST00000474289 IFRD1O00458 451 aaPredicted RBP18.24■□□□□ 0.51
ECHDC1-214ENST00000474289 HOXB8P17481 243 aaPredicted RBP18.24■□□□□ 0.51
ECHDC1-214ENST00000474289 CYP2C18P33260 490 aa18.24■□□□□ 0.51
ECHDC1-214ENST00000474289 ITKQ08881 620 aa18.24■□□□□ 0.51
ECHDC1-214ENST00000474289 SPANXN2Q5MJ10 180 aa18.24■□□□□ 0.51
ECHDC1-214ENST00000474289 TSPYL5Q86VY4 417 aaPredicted RBP18.24■□□□□ 0.51
ECHDC1-214ENST00000474289 TBC1D24Q9ULP9 559 aa18.24■□□□□ 0.51
ECHDC1-214ENST00000474289 PEX16Q9Y5Y5 336 aa18.24■□□□□ 0.51
ECHDC1-214ENST00000474289 A0A096LPI6 279 aa18.23■□□□□ 0.51
ECHDC1-214ENST00000474289 ARVCFO00192 962 aa18.23■□□□□ 0.51
ECHDC1-214ENST00000474289 STX16O14662 325 aa18.23■□□□□ 0.51
ECHDC1-214ENST00000474289 CAPN5O15484 640 aaPredicted RBP18.23■□□□□ 0.51
ECHDC1-214ENST00000474289 C21orf33P30042 268 aaPredicted RBP18.23■□□□□ 0.51
ECHDC1-214ENST00000474289 HOXA9P31269 272 aa18.23■□□□□ 0.51
ECHDC1-214ENST00000474289 SLC15A1P46059 708 aa18.23■□□□□ 0.51
ECHDC1-214ENST00000474289 TTLL4Q14679 1199 aa18.23■□□□□ 0.51
ECHDC1-214ENST00000474289 TIGD6Q17RP2 521 aa18.23■□□□□ 0.51
ECHDC1-214ENST00000474289 PROX2Q3B8N5 592 aa18.23■□□□□ 0.51
ECHDC1-214ENST00000474289 SETMARQ53H47 684 aaPredicted RBP18.23■□□□□ 0.51
ECHDC1-214ENST00000474289 Q5BKY6 102 aa18.23■□□□□ 0.51
ECHDC1-214ENST00000474289 SIRPB2Q5JXA9 342 aa18.23■□□□□ 0.51
ECHDC1-214ENST00000474289 LYPD8Q6UX82 237 aa18.23■□□□□ 0.51
ECHDC1-214ENST00000474289 GCNT7Q6ZNI0 430 aa18.23■□□□□ 0.51
ECHDC1-214ENST00000474289 PPP1R13LQ8WUF5 828 aa18.23■□□□□ 0.51
ECHDC1-214ENST00000474289 NEDD4LQ96PU5 975 aa18.23■□□□□ 0.51
ECHDC1-214ENST00000474289 GDF15Q99988 308 aa18.23■□□□□ 0.51
ECHDC1-214ENST00000474289 SLA2Q9H6Q3 261 aa18.23■□□□□ 0.51
ECHDC1-214ENST00000474289 EIF2B4Q9UI10 523 aaKnown RBP18.23■□□□□ 0.51
ECHDC1-214ENST00000474289 PCDHGA12O60330 932 aa18.23■□□□□ 0.51
ECHDC1-214ENST00000474289 SEC22BO75396 215 aa18.23■□□□□ 0.51
ECHDC1-214ENST00000474289 RECQL5O94762 991 aaPredicted RBP18.23■□□□□ 0.51
ECHDC1-214ENST00000474289 PRSS56P0CW18 603 aa18.23■□□□□ 0.51
ECHDC1-214ENST00000474289 IGFBP6P24592 240 aaPredicted RBP18.23■□□□□ 0.51
ECHDC1-214ENST00000474289 FMO4P31512 558 aa18.23■□□□□ 0.51
ECHDC1-214ENST00000474289 ETV6P41212 452 aa18.23■□□□□ 0.51
ECHDC1-214ENST00000474289 MAGEA11P43364 429 aa18.23■□□□□ 0.51
ECHDC1-214ENST00000474289 ERVPABLB-1P60509 514 aa18.23■□□□□ 0.51
ECHDC1-214ENST00000474289 NRG1Q02297 640 aaPredicted RBP18.23■□□□□ 0.51
ECHDC1-214ENST00000474289 STARD3Q14849 445 aa18.23■□□□□ 0.51
ECHDC1-214ENST00000474289 PTGR1Q14914 329 aa18.23■□□□□ 0.51
ECHDC1-214ENST00000474289 NR6A1Q15406 480 aa18.23■□□□□ 0.51
ECHDC1-214ENST00000474289 GTDC1Q4AE62 458 aa18.23■□□□□ 0.51
ECHDC1-214ENST00000474289 RFTN2Q52LD8 501 aaPredicted RBP18.23■□□□□ 0.51
ECHDC1-214ENST00000474289 MRNIPQ6NTE8 343 aa18.23■□□□□ 0.51
ECHDC1-214ENST00000474289 LETMD1Q6P1Q0 360 aa18.23■□□□□ 0.51
ECHDC1-214ENST00000474289 IL27RAQ6UWB1 636 aa18.23■□□□□ 0.51
ECHDC1-214ENST00000474289 ZNF517Q6ZMY9 492 aaPredicted RBP18.23■□□□□ 0.51
ECHDC1-214ENST00000474289 APOBEC3FQ8IUX4 373 aaKnown RBP18.23■□□□□ 0.51
ECHDC1-214ENST00000474289 ZDHHC21Q8IVQ6 265 aa18.23■□□□□ 0.51
ECHDC1-214ENST00000474289 C10orf111Q8N326 155 aa18.23■□□□□ 0.51
ECHDC1-214ENST00000474289 CADM2Q8N3J6 435 aa18.23■□□□□ 0.51
ECHDC1-214ENST00000474289 TOP6BLQ8N6T0 577 aa18.23■□□□□ 0.51
ECHDC1-214ENST00000474289 APH1BQ8WW43 257 aa18.23■□□□□ 0.51
ECHDC1-214ENST00000474289 JPH3Q8WXH2 748 aaPredicted RBP18.23■□□□□ 0.51
ECHDC1-214ENST00000474289 FCGR1BQ92637 280 aa18.23■□□□□ 0.51
ECHDC1-214ENST00000474289 Q96MT0 163 aa18.23■□□□□ 0.51
ECHDC1-214ENST00000474289 OSER1Q9NX31 292 aa18.23■□□□□ 0.51
ECHDC1-214ENST00000474289 ERVK13-1Q9NX77 482 aa18.23■□□□□ 0.51
ECHDC1-214ENST00000474289 MED16Q9Y2X0 877 aa18.23■□□□□ 0.51
ECHDC1-214ENST00000474289 LCHNA4D1U4 455 aa18.22■□□□□ 0.51
ECHDC1-214ENST00000474289 RHOBTB1O94844 696 aa18.22■□□□□ 0.51
ECHDC1-214ENST00000474289 MMP2P08253 660 aa18.22■□□□□ 0.51
ECHDC1-214ENST00000474289 DSC2Q02487 901 aa18.22■□□□□ 0.51
ECHDC1-214ENST00000474289 CREMQ03060 361 aa18.22■□□□□ 0.51
ECHDC1-214ENST00000474289 GTF2H3Q13889 308 aa18.22■□□□□ 0.51
ECHDC1-214ENST00000474289 MAPKAPK3Q16644 382 aa18.22■□□□□ 0.51
ECHDC1-214ENST00000474289 TBRG1Q3YBR2 411 aa18.22■□□□□ 0.51
ECHDC1-214ENST00000474289 FAM174BQ3ZCQ3 159 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms