RNA–Protein interactions for RNA: ENST00000474190.1

CASC3-204, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-204ENST00000474190 IMP3Q9NV31 184 aaKnown RBP10.08□□□□□ -0.8
CASC3-204ENST00000474190 CIDEBQ9UHD4 219 aa10.08□□□□□ -0.8
CASC3-204ENST00000474190 PLAGL1Q9UM63 463 aa10.08□□□□□ -0.8
CASC3-204ENST00000474190 ICKQ9UPZ9 632 aa10.08□□□□□ -0.8
CASC3-204ENST00000474190 PIKFYVEQ9Y2I7 2098 aa10.08□□□□□ -0.8
CASC3-204ENST00000474190 NPEPPSL1A6NEC2 478 aa10.07□□□□□ -0.8
CASC3-204ENST00000474190 LILRA5A6NI73 299 aa10.07□□□□□ -0.8
CASC3-204ENST00000474190 NTN3O00634 580 aaPredicted RBP10.07□□□□□ -0.8
CASC3-204ENST00000474190 ERLIN1O75477 346 aa10.07□□□□□ -0.8
CASC3-204ENST00000474190 KRT38O76015 456 aa10.07□□□□□ -0.8
CASC3-204ENST00000474190 CCDC166P0CW27 439 aa10.07□□□□□ -0.8
CASC3-204ENST00000474190 PYGBP11216 843 aa10.07□□□□□ -0.8
CASC3-204ENST00000474190 PNLIPP16233 465 aa10.07□□□□□ -0.8
CASC3-204ENST00000474190 GLB1P16278 677 aa10.07□□□□□ -0.8
CASC3-204ENST00000474190 CKMT2P17540 419 aa10.07□□□□□ -0.8
CASC3-204ENST00000474190 CSRP1P21291 193 aaKnown RBP10.07□□□□□ -0.8
CASC3-204ENST00000474190 SDHBP21912 280 aa10.07□□□□□ -0.8
CASC3-204ENST00000474190 CD1CP29017 333 aa10.07□□□□□ -0.8
CASC3-204ENST00000474190 CSF2RBP32927 897 aa10.07□□□□□ -0.8
CASC3-204ENST00000474190 OR1D5P58170 312 aa10.07□□□□□ -0.8
CASC3-204ENST00000474190 IL2P60568 153 aa10.07□□□□□ -0.8
CASC3-204ENST00000474190 PPP1CAP62136 330 aa10.07□□□□□ -0.8
CASC3-204ENST00000474190 HHEXQ03014 270 aa10.07□□□□□ -0.8
CASC3-204ENST00000474190 PRKG2Q13237 762 aa10.07□□□□□ -0.8
CASC3-204ENST00000474190 PDAP1Q13442 181 aaKnown RBP10.07□□□□□ -0.8
CASC3-204ENST00000474190 SQSTM1Q13501 440 aa10.07□□□□□ -0.8
CASC3-204ENST00000474190 MPP2Q14168 576 aa10.07□□□□□ -0.8
CASC3-204ENST00000474190 CSHL1Q14406 222 aa10.07□□□□□ -0.8
CASC3-204ENST00000474190 SUZ12Q15022 739 aaKnown RBP10.07□□□□□ -0.8
CASC3-204ENST00000474190 TMED2Q15363 201 aa10.07□□□□□ -0.8
CASC3-204ENST00000474190 NR0B2Q15466 257 aa10.07□□□□□ -0.8
CASC3-204ENST00000474190 TSNQ15631 228 aaKnown RBP10.07□□□□□ -0.8
CASC3-204ENST00000474190 SYTL3Q4VX76 610 aa10.07□□□□□ -0.8
CASC3-204ENST00000474190 UGT3A1Q6NUS8 523 aa10.07□□□□□ -0.8
CASC3-204ENST00000474190 UNC5DQ6UXZ4 953 aa10.07□□□□□ -0.8
CASC3-204ENST00000474190 ZNF574Q6ZN55 896 aaPredicted RBP10.07□□□□□ -0.8
CASC3-204ENST00000474190 SPRED1Q7Z699 444 aa10.07□□□□□ -0.8
CASC3-204ENST00000474190 TBC1D21Q8IYX1 336 aa10.07□□□□□ -0.8
CASC3-204ENST00000474190 ADGRF3Q8IZF5 1079 aa10.07□□□□□ -0.8
CASC3-204ENST00000474190 NKAPQ8N5F7 415 aaKnown RBP10.07□□□□□ -0.8
CASC3-204ENST00000474190 DEFB124Q8NES8 71 aa10.07□□□□□ -0.8
CASC3-204ENST00000474190 MAPK15Q8TD08 544 aa10.07□□□□□ -0.8
CASC3-204ENST00000474190 KIAA1191Q96A73 305 aa10.07□□□□□ -0.8
CASC3-204ENST00000474190 ARL8AQ96BM9 186 aa10.07□□□□□ -0.8
CASC3-204ENST00000474190 MTBPQ96DY7 904 aa10.07□□□□□ -0.8
CASC3-204ENST00000474190 PKP4Q99569 1192 aa10.07□□□□□ -0.8
CASC3-204ENST00000474190 SH3GL2Q99962 352 aa10.07□□□□□ -0.8
CASC3-204ENST00000474190 TSSK1BQ9BXA7 367 aa10.07□□□□□ -0.8
CASC3-204ENST00000474190 TFB2MQ9H5Q4 396 aaKnown RBP10.07□□□□□ -0.8
CASC3-204ENST00000474190 XKR8Q9H6D3 395 aa10.07□□□□□ -0.8
CASC3-204ENST00000474190 MVB12BQ9H7P6 319 aa10.07□□□□□ -0.8
CASC3-204ENST00000474190 TXNDC16Q9P2K2 825 aa10.07□□□□□ -0.8
CASC3-204ENST00000474190 LRIT1Q9P2V4 623 aa10.07□□□□□ -0.8
CASC3-204ENST00000474190 ASF1AQ9Y294 204 aa10.07□□□□□ -0.8
CASC3-204ENST00000474190 ASB1Q9Y576 335 aa10.07□□□□□ -0.8
CASC3-204ENST00000474190 COL5A1P20908 1838 aaPredicted RBP10.07□□□□□ -0.8
CASC3-204ENST00000474190 TP53BP1Q12888 1972 aaPredicted RBP10.06□□□□□ -0.8
CASC3-204ENST00000474190 PCNX2A6NKB5 2137 aa10.06□□□□□ -0.8
CASC3-204ENST00000474190 IGHV1OR21-1A0A087WYE8 117 aa10.06□□□□□ -0.8
CASC3-204ENST00000474190 TLDC2A0PJX2 215 aa10.06□□□□□ -0.8
CASC3-204ENST00000474190 GOLGA8RI6L899 631 aa10.06□□□□□ -0.8
CASC3-204ENST00000474190 BTN3A3O00478 584 aa10.06□□□□□ -0.8
CASC3-204ENST00000474190 TAPBPO15533 448 aa10.06□□□□□ -0.8
CASC3-204ENST00000474190 TNFSF14O43557 240 aa10.06□□□□□ -0.8
CASC3-204ENST00000474190 TYROBPO43914 113 aa10.06□□□□□ -0.8
CASC3-204ENST00000474190 KLHL2O95198 593 aa10.06□□□□□ -0.8
CASC3-204ENST00000474190 LDOC1O95751 146 aaPredicted RBP10.06□□□□□ -0.8
CASC3-204ENST00000474190 TYK2P29597 1187 aa10.06□□□□□ -0.8
CASC3-204ENST00000474190 PKLRP30613 574 aa10.06□□□□□ -0.8
CASC3-204ENST00000474190 LSSP48449 732 aa10.06□□□□□ -0.8
CASC3-204ENST00000474190 CLDN6P56747 220 aa10.06□□□□□ -0.8
CASC3-204ENST00000474190 YBX1P67809 324 aaKnown RBP10.06□□□□□ -0.8
CASC3-204ENST00000474190 FASTKQ14296 549 aaKnown RBP10.06□□□□□ -0.8
CASC3-204ENST00000474190 CYP2A13Q16696 494 aa10.06□□□□□ -0.8
CASC3-204ENST00000474190 C18orf21Q32NC0 220 aaPredicted RBP10.06□□□□□ -0.8
CASC3-204ENST00000474190 TTLL9Q3SXZ7 439 aa10.06□□□□□ -0.8
CASC3-204ENST00000474190 TECRLQ5HYJ1 363 aa10.06□□□□□ -0.8
CASC3-204ENST00000474190 CEP85LQ5SZL2 805 aa10.06□□□□□ -0.8
CASC3-204ENST00000474190 NKAIN2Q5VXU1 208 aa10.06□□□□□ -0.8
CASC3-204ENST00000474190 EFL1Q7Z2Z2 1120 aaKnown RBP10.06□□□□□ -0.8
CASC3-204ENST00000474190 SLC9B2Q86UD5 537 aa10.06□□□□□ -0.8
CASC3-204ENST00000474190 EXOC3L1Q86VI1 746 aa10.06□□□□□ -0.8
CASC3-204ENST00000474190 DCUN1D3Q8IWE4 304 aa10.06□□□□□ -0.8
CASC3-204ENST00000474190 RIBC1Q8N443 379 aaPredicted RBP10.06□□□□□ -0.8
CASC3-204ENST00000474190 BANPQ8N9N5 519 aa10.06□□□□□ -0.8
CASC3-204ENST00000474190 CFAP61Q8NHU2 1237 aa10.06□□□□□ -0.8
CASC3-204ENST00000474190 SETD7Q8WTS6 366 aaKnown RBP10.06□□□□□ -0.8
CASC3-204ENST00000474190 ZNF480Q8WV37 535 aa10.06□□□□□ -0.8
CASC3-204ENST00000474190 ZFPM2Q8WW38 1151 aa10.06□□□□□ -0.8
CASC3-204ENST00000474190 RSC1A1Q92681 617 aa10.06□□□□□ -0.8
CASC3-204ENST00000474190 TLCD1Q96CP7 247 aa10.06□□□□□ -0.8
CASC3-204ENST00000474190 TSPAN17Q96FV3 270 aa10.06□□□□□ -0.8
CASC3-204ENST00000474190 PGM2Q96G03 612 aa10.06□□□□□ -0.8
CASC3-204ENST00000474190 PPM1MQ96MI6 270 aa10.06□□□□□ -0.8
CASC3-204ENST00000474190 CCDC77Q9BR77 488 aa10.06□□□□□ -0.8
CASC3-204ENST00000474190 RTKNQ9BST9 563 aa10.06□□□□□ -0.8
CASC3-204ENST00000474190 HGH1Q9BTY7 390 aa10.06□□□□□ -0.8
CASC3-204ENST00000474190 TMBIM4Q9HC24 238 aa10.06□□□□□ -0.8
CASC3-204ENST00000474190 EVA1BQ9NVM1 165 aa10.06□□□□□ -0.8
CASC3-204ENST00000474190 SPHK1Q9NYA1 384 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms