RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 RAB11FIP2Q7L804 512 aa12.06□□□□□ -0.48
DDX56-209ENST00000473924 GSPT2Q8IYD1 628 aaKnown RBP12.06□□□□□ -0.48
DDX56-209ENST00000473924 MYO1HQ8N1T3 1032 aa12.06□□□□□ -0.48
DDX56-209ENST00000473924 RAB42Q8N4Z0 105 aa12.06□□□□□ -0.48
DDX56-209ENST00000473924 EIF1ADQ8N9N8 165 aaKnown RBP12.06□□□□□ -0.48
DDX56-209ENST00000473924 RCBTB1Q8NDN9 531 aa12.06□□□□□ -0.48
DDX56-209ENST00000473924 EEF1AKMT1Q8WVE0 214 aa12.06□□□□□ -0.48
DDX56-209ENST00000473924 RAD51AP1Q96B01 352 aa12.06□□□□□ -0.48
DDX56-209ENST00000473924 TSPAN17Q96FV3 270 aa12.06□□□□□ -0.48
DDX56-209ENST00000473924 LIN37Q96GY3 246 aaPredicted RBP12.06□□□□□ -0.48
DDX56-209ENST00000473924 CMKLR1Q99788 373 aa12.06□□□□□ -0.48
DDX56-209ENST00000473924 RAB33BQ9H082 229 aa12.06□□□□□ -0.48
DDX56-209ENST00000473924 ANKZF1Q9H8Y5 726 aa12.06□□□□□ -0.48
DDX56-209ENST00000473924 CIDEBQ9UHD4 219 aa12.06□□□□□ -0.48
DDX56-209ENST00000473924 PLAGL1Q9UM63 463 aa12.06□□□□□ -0.48
DDX56-209ENST00000473924 AK5Q9Y6K8 562 aa12.06□□□□□ -0.48
DDX56-209ENST00000473924 COL27A1Q8IZC6 1860 aaPredicted RBP12.06□□□□□ -0.48
DDX56-209ENST00000473924 A0A087WUV0 522 aaPredicted RBP12.05□□□□□ -0.48
DDX56-209ENST00000473924 TRABD2BA6NFA1 517 aa12.05□□□□□ -0.48
DDX56-209ENST00000473924 MATN2O00339 956 aa12.05□□□□□ -0.48
DDX56-209ENST00000473924 C1QAP02745 245 aa12.05□□□□□ -0.48
DDX56-209ENST00000473924 C9P02748 559 aa12.05□□□□□ -0.48
DDX56-209ENST00000473924 CATP04040 527 aaKnown RBP12.05□□□□□ -0.48
DDX56-209ENST00000473924 MPOP05164 745 aa12.05□□□□□ -0.48
DDX56-209ENST00000473924 JMJD7P0C870 316 aa12.05□□□□□ -0.48
DDX56-209ENST00000473924 MAP4P27816 1152 aaKnown RBP12.05□□□□□ -0.48
DDX56-209ENST00000473924 TNFRSF8P28908 595 aa12.05□□□□□ -0.48
DDX56-209ENST00000473924 CSTF2P33240 577 aaKnown RBP eCLIP12.05□□□□□ -0.48
DDX56-209ENST00000473924 PMS2P54278 862 aa12.05□□□□□ -0.48
DDX56-209ENST00000473924 TIAL1Q01085 375 aaKnown RBP eCLIP12.05□□□□□ -0.48
DDX56-209ENST00000473924 POU4F1Q01851 419 aa12.05□□□□□ -0.48
DDX56-209ENST00000473924 EIF3IQ13347 325 aaKnown RBP12.05□□□□□ -0.48
DDX56-209ENST00000473924 CAMK2BQ13554 666 aa12.05□□□□□ -0.48
DDX56-209ENST00000473924 USP10Q14694 798 aaKnown RBP12.05□□□□□ -0.48
DDX56-209ENST00000473924 PIWIL4Q7Z3Z4 852 aaKnown RBP12.05□□□□□ -0.48
DDX56-209ENST00000473924 SPNS2Q8IVW8 549 aa12.05□□□□□ -0.48
DDX56-209ENST00000473924 FBXO39Q8N4B4 442 aa12.05□□□□□ -0.48
DDX56-209ENST00000473924 WDR36Q8NI36 951 aaKnown RBP12.05□□□□□ -0.48
DDX56-209ENST00000473924 UHMK1Q8TAS1 419 aaKnown RBP12.05□□□□□ -0.48
DDX56-209ENST00000473924 NXPE2Q96DL1 559 aa12.05□□□□□ -0.48
DDX56-209ENST00000473924 LINGO1Q96FE5 620 aa12.05□□□□□ -0.48
DDX56-209ENST00000473924 OLFM1Q99784 485 aa12.05□□□□□ -0.48
DDX56-209ENST00000473924 NRSN2Q9GZP1 204 aa12.05□□□□□ -0.48
DDX56-209ENST00000473924 ACSS3Q9H6R3 686 aa12.05□□□□□ -0.48
DDX56-209ENST00000473924 SYTL2Q9HCH5 934 aa12.05□□□□□ -0.48
DDX56-209ENST00000473924 EPHA6Q9UF33 1036 aa12.05□□□□□ -0.48
DDX56-209ENST00000473924 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.05□□□□□ -0.48
DDX56-209ENST00000473924 SATB2Q9UPW6 733 aa12.05□□□□□ -0.48
DDX56-209ENST00000473924 ICKQ9UPZ9 632 aa12.05□□□□□ -0.48
DDX56-209ENST00000473924 MTO1Q9Y2Z2 717 aaKnown RBP12.05□□□□□ -0.48
DDX56-209ENST00000473924 IKBKGQ9Y6K9 419 aa12.05□□□□□ -0.48
DDX56-209ENST00000473924 V9GYY5 206 aaPredicted RBP12.05□□□□□ -0.48
DDX56-209ENST00000473924 MN1Q10571 1320 aaPredicted RBP12.05□□□□□ -0.48
DDX56-209ENST00000473924 SPEGQ15772 3267 aa12.04□□□□□ -0.48
DDX56-209ENST00000473924 PIPSLA2A3N6 862 aa12.04□□□□□ -0.48
DDX56-209ENST00000473924 PABPN1LA6NDY0 278 aaKnown RBP12.04□□□□□ -0.48
DDX56-209ENST00000473924 C2orf74A8MZ97 194 aa12.04□□□□□ -0.48
DDX56-209ENST00000473924 BTN3A3O00478 584 aa12.04□□□□□ -0.48
DDX56-209ENST00000473924 BTN3A1O00481 513 aa12.04□□□□□ -0.48
DDX56-209ENST00000473924 RASGRF2O14827 1237 aa12.04□□□□□ -0.48
DDX56-209ENST00000473924 PLD2O14939 933 aa12.04□□□□□ -0.48
DDX56-209ENST00000473924 HGSO14964 777 aaPredicted RBP12.04□□□□□ -0.48
DDX56-209ENST00000473924 ZBTB14O43829 449 aa12.04□□□□□ -0.48
DDX56-209ENST00000473924 PSIP1O75475 530 aaKnown RBP12.04□□□□□ -0.48
DDX56-209ENST00000473924 FAM155BO75949 473 aa12.04□□□□□ -0.48
DDX56-209ENST00000473924 SYF2O95926 243 aaKnown RBP12.04□□□□□ -0.48
DDX56-209ENST00000473924 MYBL2P10244 700 aa12.04□□□□□ -0.48
DDX56-209ENST00000473924 STMN1P16949 149 aa12.04□□□□□ -0.48
DDX56-209ENST00000473924 SEPHS1P49903 392 aa12.04□□□□□ -0.48
DDX56-209ENST00000473924 RAB28P51157 221 aa12.04□□□□□ -0.48
DDX56-209ENST00000473924 PGGT1BP53609 377 aa12.04□□□□□ -0.48
DDX56-209ENST00000473924 TAS2R39P59534 338 aa12.04□□□□□ -0.48
DDX56-209ENST00000473924 PPP1CAP62136 330 aa12.04□□□□□ -0.48
DDX56-209ENST00000473924 GABREP78334 506 aa12.04□□□□□ -0.48
DDX56-209ENST00000473924 C16orf72Q14CZ0 275 aa12.04□□□□□ -0.48
DDX56-209ENST00000473924 UBAP2Q5T6F2 1119 aaKnown RBP12.04□□□□□ -0.48
DDX56-209ENST00000473924 CACHD1Q5VU97 1274 aa12.04□□□□□ -0.48
DDX56-209ENST00000473924 UBE2R2Q712K3 238 aaPredicted RBP12.04□□□□□ -0.48
DDX56-209ENST00000473924 NKAPQ8N5F7 415 aaKnown RBP12.04□□□□□ -0.48
DDX56-209ENST00000473924 AGBL5Q8NDL9 886 aa12.04□□□□□ -0.48
DDX56-209ENST00000473924 ASB11Q8WXH4 323 aa12.04□□□□□ -0.48
DDX56-209ENST00000473924 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.04□□□□□ -0.48
DDX56-209ENST00000473924 CD180Q99467 661 aa12.04□□□□□ -0.48
DDX56-209ENST00000473924 GPR22Q99680 433 aa12.04□□□□□ -0.48
DDX56-209ENST00000473924 NRTNQ99748 197 aa12.04□□□□□ -0.48
DDX56-209ENST00000473924 MCMBPQ9BTE3 642 aa12.04□□□□□ -0.48
DDX56-209ENST00000473924 RAB11FIP5Q9BXF6 653 aa12.04□□□□□ -0.48
DDX56-209ENST00000473924 CAB39LQ9H9S4 337 aa12.04□□□□□ -0.48
DDX56-209ENST00000473924 POLR1BQ9H9Y6 1135 aa12.04□□□□□ -0.48
DDX56-209ENST00000473924 GPAMQ9HCL2 828 aa12.04□□□□□ -0.48
DDX56-209ENST00000473924 OR6C2Q9NZP2 312 aa12.04□□□□□ -0.48
DDX56-209ENST00000473924 PDP2Q9P2J9 529 aa12.04□□□□□ -0.48
DDX56-209ENST00000473924 LNPEPQ9UIQ6 1025 aa12.04□□□□□ -0.48
DDX56-209ENST00000473924 LOXL2Q9Y4K0 774 aa12.04□□□□□ -0.48
DDX56-209ENST00000473924 ARHGEF33A8MVX0 844 aa12.03□□□□□ -0.48
DDX56-209ENST00000473924 ISM1B1AKI9 464 aa12.03□□□□□ -0.48
DDX56-209ENST00000473924 POC1B-GALNT4F8VUJ3 575 aa12.03□□□□□ -0.48
DDX56-209ENST00000473924 TOX3O15405 576 aaPredicted RBP12.03□□□□□ -0.48
DDX56-209ENST00000473924 RIPK2O43353 540 aa12.03□□□□□ -0.48
DDX56-209ENST00000473924 KIF1CO43896 1103 aaKnown RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms