RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 C2orf74A8MZ97 194 aa12.15□□□□□ -0.46
TRAF4-209ENST00000473421 AGPSO00116 658 aa12.15□□□□□ -0.46
TRAF4-209ENST00000473421 ZSCAN9O15535 394 aaPredicted RBP12.15□□□□□ -0.46
TRAF4-209ENST00000473421 KLHL18O94889 574 aa12.15□□□□□ -0.46
TRAF4-209ENST00000473421 SNRPB2P08579 225 aaKnown RBP12.15□□□□□ -0.46
TRAF4-209ENST00000473421 ADRA1AP35348 466 aa12.15□□□□□ -0.46
TRAF4-209ENST00000473421 KIRREL2Q6UWL6 708 aa12.15□□□□□ -0.46
TRAF4-209ENST00000473421 RANBP10Q6VN20 620 aa12.15□□□□□ -0.46
TRAF4-209ENST00000473421 COX15Q7KZN9 410 aa12.15□□□□□ -0.46
TRAF4-209ENST00000473421 LUZP1Q86V48 1076 aa12.15□□□□□ -0.46
TRAF4-209ENST00000473421 VSIG1Q86XK7 387 aa12.15□□□□□ -0.46
TRAF4-209ENST00000473421 GPR135Q8IZ08 494 aa12.15□□□□□ -0.46
TRAF4-209ENST00000473421 NXPE1Q8N323 547 aa12.15□□□□□ -0.46
TRAF4-209ENST00000473421 DNAJB14Q8TBM8 379 aa12.15□□□□□ -0.46
TRAF4-209ENST00000473421 CTNNBL1Q8WYA6 563 aaPredicted RBP12.15□□□□□ -0.46
TRAF4-209ENST00000473421 TFGQ92734 400 aaPredicted RBP12.15□□□□□ -0.46
TRAF4-209ENST00000473421 CNDP1Q96KN2 507 aa12.15□□□□□ -0.46
TRAF4-209ENST00000473421 SLX1AQ9BQ83 275 aa12.15□□□□□ -0.46
TRAF4-209ENST00000473421 CCM2Q9BSQ5 444 aa12.15□□□□□ -0.46
TRAF4-209ENST00000473421 ATP13A2Q9NQ11 1180 aa12.15□□□□□ -0.46
TRAF4-209ENST00000473421 AGPAT4Q9NRZ5 378 aa12.15□□□□□ -0.46
TRAF4-209ENST00000473421 GPN3Q9UHW5 284 aaPredicted RBP12.15□□□□□ -0.46
TRAF4-209ENST00000473421 HS3ST3B1Q9Y662 390 aa12.15□□□□□ -0.46
TRAF4-209ENST00000473421 PRSS21Q9Y6M0 314 aa12.15□□□□□ -0.46
TRAF4-209ENST00000473421 SETD2Q9BYW2 2564 aaPredicted RBP12.14□□□□□ -0.47
TRAF4-209ENST00000473421 MATN2O00339 956 aa12.14□□□□□ -0.47
TRAF4-209ENST00000473421 MED26O95402 600 aa12.14□□□□□ -0.47
TRAF4-209ENST00000473421 STSP08842 583 aa12.14□□□□□ -0.47
TRAF4-209ENST00000473421 CHRM5P08912 532 aaPredicted RBP12.14□□□□□ -0.47
TRAF4-209ENST00000473421 HBQ1P09105 142 aa12.14□□□□□ -0.47
TRAF4-209ENST00000473421 TMEM253P0C7T8 217 aa12.14□□□□□ -0.47
TRAF4-209ENST00000473421 ATP1B2P14415 290 aaPredicted RBP12.14□□□□□ -0.47
TRAF4-209ENST00000473421 ZFXP17010 805 aaPredicted RBP12.14□□□□□ -0.47
TRAF4-209ENST00000473421 MCM3P25205 808 aa12.14□□□□□ -0.47
TRAF4-209ENST00000473421 MARCKSL1P49006 195 aa12.14□□□□□ -0.47
TRAF4-209ENST00000473421 RIPPLY3P57055 190 aa12.14□□□□□ -0.47
TRAF4-209ENST00000473421 CDC16Q13042 620 aa12.14□□□□□ -0.47
TRAF4-209ENST00000473421 AIMP2Q13155 320 aaKnown RBP12.14□□□□□ -0.47
TRAF4-209ENST00000473421 MPP3Q13368 585 aa12.14□□□□□ -0.47
TRAF4-209ENST00000473421 SPARCL1Q14515 664 aa12.14□□□□□ -0.47
TRAF4-209ENST00000473421 BRD3Q15059 726 aa12.14□□□□□ -0.47
TRAF4-209ENST00000473421 TAF1AQ15573 450 aaPredicted RBP12.14□□□□□ -0.47
TRAF4-209ENST00000473421 SLC18A3Q16572 532 aa12.14□□□□□ -0.47
TRAF4-209ENST00000473421 CYP2A13Q16696 494 aa12.14□□□□□ -0.47
TRAF4-209ENST00000473421 PRAMEF13Q5VWM6 474 aa12.14□□□□□ -0.47
TRAF4-209ENST00000473421 DENND5AQ6IQ26 1287 aa12.14□□□□□ -0.47
TRAF4-209ENST00000473421 PIANPQ8IYJ0 282 aa12.14□□□□□ -0.47
TRAF4-209ENST00000473421 PPP4R1Q8TF05 950 aa12.14□□□□□ -0.47
TRAF4-209ENST00000473421 IP6K3Q96PC2 410 aa12.14□□□□□ -0.47
TRAF4-209ENST00000473421 TAAR6Q96RI8 345 aa12.14□□□□□ -0.47
TRAF4-209ENST00000473421 NAT10Q9H0A0 1025 aaKnown RBP12.14□□□□□ -0.47
TRAF4-209ENST00000473421 NDOR1Q9UHB4 597 aa12.14□□□□□ -0.47
TRAF4-209ENST00000473421 CIDEBQ9UHD4 219 aa12.14□□□□□ -0.47
TRAF4-209ENST00000473421 RSPH14Q9UHP6 348 aa12.14□□□□□ -0.47
TRAF4-209ENST00000473421 CRLS1Q9UJA2 301 aa12.14□□□□□ -0.47
TRAF4-209ENST00000473421 LUC7L2Q9Y383 392 aaKnown RBP12.14□□□□□ -0.47
TRAF4-209ENST00000473421 HEBP2Q9Y5Z4 205 aa12.14□□□□□ -0.47
TRAF4-209ENST00000473421 IGLV3-16A0A075B6K0 115 aa12.13□□□□□ -0.47
TRAF4-209ENST00000473421 C17orf113A0A1B0GUU1 675 aa12.13□□□□□ -0.47
TRAF4-209ENST00000473421 IPO13O94829 963 aaKnown RBP12.13□□□□□ -0.47
TRAF4-209ENST00000473421 EDN3P14138 238 aa12.13□□□□□ -0.47
TRAF4-209ENST00000473421 COMTP21964 271 aa12.13□□□□□ -0.47
TRAF4-209ENST00000473421 ALAS2P22557 587 aa12.13□□□□□ -0.47
TRAF4-209ENST00000473421 MMP11P24347 488 aa12.13□□□□□ -0.47
TRAF4-209ENST00000473421 ACADLP28330 430 aa12.13□□□□□ -0.47
TRAF4-209ENST00000473421 RBL1P28749 1068 aa12.13□□□□□ -0.47
TRAF4-209ENST00000473421 TSFMP43897 325 aaKnown RBP12.13□□□□□ -0.47
TRAF4-209ENST00000473421 ZNF140P52738 457 aaPredicted RBP12.13□□□□□ -0.47
TRAF4-209ENST00000473421 ZNF169Q14929 603 aaPredicted RBP12.13□□□□□ -0.47
TRAF4-209ENST00000473421 LRRC38Q5VT99 294 aa12.13□□□□□ -0.47
TRAF4-209ENST00000473421 ZNF324BQ6AW86 544 aaPredicted RBP12.13□□□□□ -0.47
TRAF4-209ENST00000473421 SARM1Q6SZW1 724 aa12.13□□□□□ -0.47
TRAF4-209ENST00000473421 LINC00696Q6ZRV3 163 aa12.13□□□□□ -0.47
TRAF4-209ENST00000473421 METTL27Q8N6F8 245 aaPredicted RBP12.13□□□□□ -0.47
TRAF4-209ENST00000473421 PROKR1Q8TCW9 393 aa12.13□□□□□ -0.47
TRAF4-209ENST00000473421 ITLN2Q8WWU7 325 aaPredicted RBP12.13□□□□□ -0.47
TRAF4-209ENST00000473421 N4BP2L2Q92802 583 aaPredicted RBP12.13□□□□□ -0.47
TRAF4-209ENST00000473421 DCUN1D1Q96GG9 259 aa12.13□□□□□ -0.47
TRAF4-209ENST00000473421 SPSB2Q99619 263 aa12.13□□□□□ -0.47
TRAF4-209ENST00000473421 CHP1Q99653 195 aa12.13□□□□□ -0.47
TRAF4-209ENST00000473421 AP1M1Q9BXS5 423 aa12.13□□□□□ -0.47
TRAF4-209ENST00000473421 SOX17Q9H6I2 414 aaPredicted RBP12.13□□□□□ -0.47
TRAF4-209ENST00000473421 MVB12BQ9H7P6 319 aa12.13□□□□□ -0.47
TRAF4-209ENST00000473421 SPTLC3Q9NUV7 552 aa12.13□□□□□ -0.47
TRAF4-209ENST00000473421 COPG2Q9UBF2 871 aa12.13□□□□□ -0.47
TRAF4-209ENST00000473421 CTSFQ9UBX1 484 aa12.13□□□□□ -0.47
TRAF4-209ENST00000473421 AP1M2Q9Y6Q5 423 aa12.13□□□□□ -0.47
TRAF4-209ENST00000473421 BHMG1C9JSJ3 638 aaPredicted RBP12.12□□□□□ -0.47
TRAF4-209ENST00000473421 GRIA3P42263 894 aa12.12□□□□□ -0.47
TRAF4-209ENST00000473421 CD151P48509 253 aa12.12□□□□□ -0.47
TRAF4-209ENST00000473421 NR2C2P49116 596 aa12.12□□□□□ -0.47
TRAF4-209ENST00000473421 TDGF1P3P51864 188 aa12.12□□□□□ -0.47
TRAF4-209ENST00000473421 UBASH3AP57075 661 aa12.12□□□□□ -0.47
TRAF4-209ENST00000473421 CDSNQ15517 529 aa12.12□□□□□ -0.47
TRAF4-209ENST00000473421 NKG7Q16617 165 aa12.12□□□□□ -0.47
TRAF4-209ENST00000473421 TTLL10Q6ZVT0 673 aa12.12□□□□□ -0.47
TRAF4-209ENST00000473421 SERPINA9Q86WD7 417 aa12.12□□□□□ -0.47
TRAF4-209ENST00000473421 C2orf73Q8N5S3 287 aaPredicted RBP12.12□□□□□ -0.47
TRAF4-209ENST00000473421 TM9SF4Q92544 642 aa12.12□□□□□ -0.47
TRAF4-209ENST00000473421 DNAJC1Q96KC8 554 aaKnown RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms