RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-223ENST00000473345 TFB1MQ8WVM0 346 aaKnown RBP9.26□□□□□ -0.93
MCF2L-223ENST00000473345 FAR1Q8WVX9 515 aa9.26□□□□□ -0.93
MCF2L-223ENST00000473345 ITLN2Q8WWU7 325 aaPredicted RBP9.26□□□□□ -0.93
MCF2L-223ENST00000473345 ANP32BQ92688 251 aaKnown RBP9.26□□□□□ -0.93
MCF2L-223ENST00000473345 RBM41Q96IZ5 413 aaKnown RBP9.26□□□□□ -0.93
MCF2L-223ENST00000473345 DHRS4Q9BTZ2 278 aa9.26□□□□□ -0.93
MCF2L-223ENST00000473345 MENTQ9BUN1 341 aa9.26□□□□□ -0.93
MCF2L-223ENST00000473345 TRIM5Q9C035 493 aa9.26□□□□□ -0.93
MCF2L-223ENST00000473345 ZCCHC2Q9C0B9 1178 aaKnown RBP9.26□□□□□ -0.93
MCF2L-223ENST00000473345 SYNPO2LQ9H987 977 aa9.26□□□□□ -0.93
MCF2L-223ENST00000473345 FANCEQ9HB96 536 aa9.26□□□□□ -0.93
MCF2L-223ENST00000473345 SPTLC3Q9NUV7 552 aa9.26□□□□□ -0.93
MCF2L-223ENST00000473345 KLHL8Q9P2G9 620 aaPredicted RBP9.26□□□□□ -0.93
MCF2L-223ENST00000473345 CTSFQ9UBX1 484 aa9.26□□□□□ -0.93
MCF2L-223ENST00000473345 CIDEBQ9UHD4 219 aa9.26□□□□□ -0.93
MCF2L-223ENST00000473345 SERTAD3Q9UJW9 196 aa9.26□□□□□ -0.93
MCF2L-223ENST00000473345 TFR2Q9UP52 801 aa9.26□□□□□ -0.93
MCF2L-223ENST00000473345 PKP3Q9Y446 797 aa9.26□□□□□ -0.93
MCF2L-223ENST00000473345 HS3ST3B1Q9Y662 390 aa9.26□□□□□ -0.93
MCF2L-223ENST00000473345 ADGRG4Q8IZF6 3080 aa9.26□□□□□ -0.93
MCF2L-223ENST00000473345 SEC16AO15027 2179 aa9.25□□□□□ -0.93
MCF2L-223ENST00000473345 TRBV5-4A0A0C4DH59 114 aa9.25□□□□□ -0.93
MCF2L-223ENST00000473345 KRT87PA6NCN2 255 aa9.25□□□□□ -0.93
MCF2L-223ENST00000473345 C2orf74A8MZ97 194 aa9.25□□□□□ -0.93
MCF2L-223ENST00000473345 BHMG1C9JSJ3 638 aaPredicted RBP9.25□□□□□ -0.93
MCF2L-223ENST00000473345 PRSS44E7EML9 344 aa9.25□□□□□ -0.93
MCF2L-223ENST00000473345 ZSCAN9O15535 394 aaPredicted RBP9.25□□□□□ -0.93
MCF2L-223ENST00000473345 SERPINC1P01008 464 aa9.25□□□□□ -0.93
MCF2L-223ENST00000473345 CELA2AP08217 269 aa9.25□□□□□ -0.93
MCF2L-223ENST00000473345 CHRM5P08912 532 aaPredicted RBP9.25□□□□□ -0.93
MCF2L-223ENST00000473345 ATP1B2P14415 290 aaPredicted RBP9.25□□□□□ -0.93
MCF2L-223ENST00000473345 AGXTP21549 392 aa9.25□□□□□ -0.93
MCF2L-223ENST00000473345 COMTP21964 271 aa9.25□□□□□ -0.93
MCF2L-223ENST00000473345 ITGA3P26006 1051 aa9.25□□□□□ -0.93
MCF2L-223ENST00000473345 NDUFS1P28331 727 aa9.25□□□□□ -0.93
MCF2L-223ENST00000473345 RBL1P28749 1068 aa9.25□□□□□ -0.93
MCF2L-223ENST00000473345 TSFMP43897 325 aaKnown RBP9.25□□□□□ -0.93
MCF2L-223ENST00000473345 UBASH3AP57075 661 aa9.25□□□□□ -0.93
MCF2L-223ENST00000473345 SNRPNP63162 240 aaKnown RBP9.25□□□□□ -0.93
MCF2L-223ENST00000473345 DCDP81605 110 aaKnown RBP9.25□□□□□ -0.93
MCF2L-223ENST00000473345 SPARCL1Q14515 664 aa9.25□□□□□ -0.93
MCF2L-223ENST00000473345 PRAMEF13Q5VWM6 474 aa9.25□□□□□ -0.93
MCF2L-223ENST00000473345 ZDHHC20Q5W0Z9 365 aa9.25□□□□□ -0.93
MCF2L-223ENST00000473345 CCDC70Q6NSX1 233 aa9.25□□□□□ -0.93
MCF2L-223ENST00000473345 PARP9Q8IXQ6 854 aa9.25□□□□□ -0.93
MCF2L-223ENST00000473345 ZNF295-AS1Q8N0V1 137 aa9.25□□□□□ -0.93
MCF2L-223ENST00000473345 ZADH2Q8N4Q0 377 aa9.25□□□□□ -0.93
MCF2L-223ENST00000473345 METTL27Q8N6F8 245 aaPredicted RBP9.25□□□□□ -0.93
MCF2L-223ENST00000473345 LINC01555Q8NAE3 123 aa9.25□□□□□ -0.93
MCF2L-223ENST00000473345 CLEC1AQ8NC01 280 aa9.25□□□□□ -0.93
MCF2L-223ENST00000473345 PPP4R1Q8TF05 950 aa9.25□□□□□ -0.93
MCF2L-223ENST00000473345 CTNNBL1Q8WYA6 563 aaPredicted RBP9.25□□□□□ -0.93
MCF2L-223ENST00000473345 PSMF1Q92530 271 aa9.25□□□□□ -0.93
MCF2L-223ENST00000473345 TFGQ92734 400 aaPredicted RBP9.25□□□□□ -0.93
MCF2L-223ENST00000473345 PTERQ96BW5 349 aa9.25□□□□□ -0.93
MCF2L-223ENST00000473345 DNAJC1Q96KC8 554 aaKnown RBP9.25□□□□□ -0.93
MCF2L-223ENST00000473345 FER1L6-AS2Q96M78 137 aa9.25□□□□□ -0.93
MCF2L-223ENST00000473345 QKIQ96PU8 341 aaKnown RBP eCLIP9.25□□□□□ -0.93
MCF2L-223ENST00000473345 SRPK1Q96SB4 655 aaKnown RBP9.25□□□□□ -0.93
MCF2L-223ENST00000473345 FAM118BQ9BPY3 351 aa9.25□□□□□ -0.93
MCF2L-223ENST00000473345 DPH2Q9BQC3 489 aaPredicted RBP9.25□□□□□ -0.93
MCF2L-223ENST00000473345 SYTL2Q9HCH5 934 aa9.25□□□□□ -0.93
MCF2L-223ENST00000473345 HACD3Q9P035 362 aa9.25□□□□□ -0.93
MCF2L-223ENST00000473345 IFNKQ9P0W0 207 aa9.25□□□□□ -0.93
MCF2L-223ENST00000473345 STOX2Q9P2F5 926 aaPredicted RBP9.25□□□□□ -0.93
MCF2L-223ENST00000473345 IFT80Q9P2H3 777 aaPredicted RBP9.25□□□□□ -0.93
MCF2L-223ENST00000473345 COLEC10Q9Y6Z7 277 aa9.25□□□□□ -0.93
MCF2L-223ENST00000473345 NUP210LQ5VU65 1888 aa9.25□□□□□ -0.93
MCF2L-223ENST00000473345 hCG_1818297A0A087WSY0 165 aa9.24□□□□□ -0.93
MCF2L-223ENST00000473345 OR51F1A6NGY5 319 aa9.24□□□□□ -0.93
MCF2L-223ENST00000473345 C19orf84I3L1E1 186 aa9.24□□□□□ -0.93
MCF2L-223ENST00000473345 CBFA2T2O43439 604 aa9.24□□□□□ -0.93
MCF2L-223ENST00000473345 SNRNP200O75643 2136 aaKnown RBP9.24□□□□□ -0.93
MCF2L-223ENST00000473345 SNRPB2P08579 225 aaKnown RBP9.24□□□□□ -0.93
MCF2L-223ENST00000473345 EDN3P14138 238 aa9.24□□□□□ -0.93
MCF2L-223ENST00000473345 MMP11P24347 488 aa9.24□□□□□ -0.93
MCF2L-223ENST00000473345 MST1P26927 711 aa9.24□□□□□ -0.93
MCF2L-223ENST00000473345 PSMB4P28070 264 aa9.24□□□□□ -0.93
MCF2L-223ENST00000473345 YBX1P67809 324 aaKnown RBP9.24□□□□□ -0.93
MCF2L-223ENST00000473345 MPP3Q13368 585 aa9.24□□□□□ -0.93
MCF2L-223ENST00000473345 GRB7Q14451 532 aa9.24□□□□□ -0.93
MCF2L-223ENST00000473345 KRT33BQ14525 404 aa9.24□□□□□ -0.93
MCF2L-223ENST00000473345 ZNF169Q14929 603 aaPredicted RBP9.24□□□□□ -0.93
MCF2L-223ENST00000473345 BRD3Q15059 726 aa9.24□□□□□ -0.93
MCF2L-223ENST00000473345 NKG7Q16617 165 aa9.24□□□□□ -0.93
MCF2L-223ENST00000473345 DBN1Q16643 649 aa9.24□□□□□ -0.93
MCF2L-223ENST00000473345 LRRC38Q5VT99 294 aa9.24□□□□□ -0.93
MCF2L-223ENST00000473345 SERPINA9Q86WD7 417 aa9.24□□□□□ -0.93
MCF2L-223ENST00000473345 VRK3Q8IV63 474 aa9.24□□□□□ -0.93
MCF2L-223ENST00000473345 SPNS2Q8IVW8 549 aa9.24□□□□□ -0.93
MCF2L-223ENST00000473345 SLC34A3Q8N130 599 aa9.24□□□□□ -0.93
MCF2L-223ENST00000473345 C2orf73Q8N5S3 287 aaPredicted RBP9.24□□□□□ -0.93
MCF2L-223ENST00000473345 OR11G2Q8NGC1 345 aa9.24□□□□□ -0.93
MCF2L-223ENST00000473345 DNAJB14Q8TBM8 379 aa9.24□□□□□ -0.93
MCF2L-223ENST00000473345 KRT35Q92764 455 aa9.24□□□□□ -0.93
MCF2L-223ENST00000473345 CNDP1Q96KN2 507 aa9.24□□□□□ -0.93
MCF2L-223ENST00000473345 CCM2Q9BSQ5 444 aa9.24□□□□□ -0.93
MCF2L-223ENST00000473345 MAK16Q9BXY0 300 aaKnown RBP9.24□□□□□ -0.93
MCF2L-223ENST00000473345 TRIM8Q9BZR9 551 aa9.24□□□□□ -0.93
MCF2L-223ENST00000473345 SLC7A5P2Q9GIP4 190 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms