RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 MEI1Q5TIA1 1274 aa14.79□□□□□ -0.04
VTI1A-203ENST00000472892 AFTPHQ6ULP2 937 aa14.79□□□□□ -0.04
VTI1A-203ENST00000472892 NAPRTQ6XQN6 538 aa14.79□□□□□ -0.04
VTI1A-203ENST00000472892 ENDOVQ8N8Q3 282 aaKnown RBP14.79□□□□□ -0.04
VTI1A-203ENST00000472892 TEX19Q8NA77 164 aa14.79□□□□□ -0.04
VTI1A-203ENST00000472892 GLIS1Q8NBF1 620 aa14.79□□□□□ -0.04
VTI1A-203ENST00000472892 FLVCR1-AS1Q8TAF5 88 aa14.79□□□□□ -0.04
VTI1A-203ENST00000472892 TCTN2Q96GX1 697 aa14.79□□□□□ -0.04
VTI1A-203ENST00000472892 OR2A14Q96R47 310 aa14.79□□□□□ -0.04
VTI1A-203ENST00000472892 OCEL1Q9H607 264 aa14.79□□□□□ -0.04
VTI1A-203ENST00000472892 OR6C2Q9NZP2 312 aa14.79□□□□□ -0.04
VTI1A-203ENST00000472892 PAK5Q9P286 719 aa14.79□□□□□ -0.04
VTI1A-203ENST00000472892 TCFL5Q9UL49 500 aa14.79□□□□□ -0.04
VTI1A-203ENST00000472892 DRG1Q9Y295 367 aaKnown RBP14.79□□□□□ -0.04
VTI1A-203ENST00000472892 E7EQ34 232 aa14.78□□□□□ -0.04
VTI1A-203ENST00000472892 F8W8V4 182 aa14.78□□□□□ -0.04
VTI1A-203ENST00000472892 H3BMH7 237 aa14.78□□□□□ -0.04
VTI1A-203ENST00000472892 ZNF749O43361 778 aa14.78□□□□□ -0.04
VTI1A-203ENST00000472892 PDGFAP04085 211 aa14.78□□□□□ -0.04
VTI1A-203ENST00000472892 CHRM5P08912 532 aaPredicted RBP14.78□□□□□ -0.04
VTI1A-203ENST00000472892 HBQ1P09105 142 aa14.78□□□□□ -0.04
VTI1A-203ENST00000472892 UGT2B7P16662 529 aa14.78□□□□□ -0.04
VTI1A-203ENST00000472892 GABRA4P48169 554 aa14.78□□□□□ -0.04
VTI1A-203ENST00000472892 ITGA1P56199 1179 aa14.78□□□□□ -0.04
VTI1A-203ENST00000472892 RPS6KA1Q15418 735 aa14.78□□□□□ -0.04
VTI1A-203ENST00000472892 SIX1Q15475 284 aaPredicted RBP14.78□□□□□ -0.04
VTI1A-203ENST00000472892 ZIC1Q15915 447 aa14.78□□□□□ -0.04
VTI1A-203ENST00000472892 CCNG2Q16589 344 aa14.78□□□□□ -0.04
VTI1A-203ENST00000472892 ZNF385CQ66K41 422 aaPredicted RBP14.78□□□□□ -0.04
VTI1A-203ENST00000472892 DRICH1Q6PGQ1 229 aaPredicted RBP14.78□□□□□ -0.04
VTI1A-203ENST00000472892 SYTL1Q8IYJ3 562 aa14.78□□□□□ -0.04
VTI1A-203ENST00000472892 CCDC89Q8N998 374 aa14.78□□□□□ -0.04
VTI1A-203ENST00000472892 OR6P1Q8NGX9 317 aa14.78□□□□□ -0.04
VTI1A-203ENST00000472892 DPH2Q9BQC3 489 aaPredicted RBP14.78□□□□□ -0.04
VTI1A-203ENST00000472892 CARD6Q9BX69 1037 aa14.78□□□□□ -0.04
VTI1A-203ENST00000472892 AP1M1Q9BXS5 423 aa14.78□□□□□ -0.04
VTI1A-203ENST00000472892 ING2Q9H160 280 aa14.78□□□□□ -0.04
VTI1A-203ENST00000472892 FAM60AQ9NP50 221 aa14.78□□□□□ -0.04
VTI1A-203ENST00000472892 MLXIPLQ9NP71 852 aa14.78□□□□□ -0.04
VTI1A-203ENST00000472892 SPHK1Q9NYA1 384 aa14.78□□□□□ -0.04
VTI1A-203ENST00000472892 TCAF1Q9Y4C2 921 aa14.78□□□□□ -0.04
VTI1A-203ENST00000472892 PIKFYVEQ9Y2I7 2098 aa14.77□□□□□ -0.04
VTI1A-203ENST00000472892 ARGFXA6NJG6 315 aa14.77□□□□□ -0.05
VTI1A-203ENST00000472892 APRTP07741 180 aa14.77□□□□□ -0.05
VTI1A-203ENST00000472892 ZSCAN5DPP0CG00 497 aa14.77□□□□□ -0.05
VTI1A-203ENST00000472892 CCR7P32248 378 aa14.77□□□□□ -0.05
VTI1A-203ENST00000472892 RPL22P35268 128 aaKnown RBP14.77□□□□□ -0.05
VTI1A-203ENST00000472892 PPARGP37231 505 aaPredicted RBP14.77□□□□□ -0.05
VTI1A-203ENST00000472892 SEMA3AQ14563 771 aa14.77□□□□□ -0.05
VTI1A-203ENST00000472892 SYTL3Q4VX76 610 aa14.77□□□□□ -0.05
VTI1A-203ENST00000472892 FASTKD1Q53R41 847 aaKnown RBP14.77□□□□□ -0.05
VTI1A-203ENST00000472892 DNAJC21Q5F1R6 531 aaKnown RBP14.77□□□□□ -0.05
VTI1A-203ENST00000472892 PCID2Q5JVF3 399 aa14.77□□□□□ -0.05
VTI1A-203ENST00000472892 COLEC12Q5KU26 742 aa14.77□□□□□ -0.05
VTI1A-203ENST00000472892 PAPD7Q5XG87 772 aaKnown RBP14.77□□□□□ -0.05
VTI1A-203ENST00000472892 CPZQ66K79 652 aa14.77□□□□□ -0.05
VTI1A-203ENST00000472892 FAM198BQ6UWH4 519 aa14.77□□□□□ -0.05
VTI1A-203ENST00000472892 TRIM73Q86UV7 250 aa14.77□□□□□ -0.05
VTI1A-203ENST00000472892 HOOK3Q86VS8 718 aa14.77□□□□□ -0.05
VTI1A-203ENST00000472892 SLC22A15Q8IZD6 547 aa14.77□□□□□ -0.05
VTI1A-203ENST00000472892 C19orf47Q8N9M1 422 aaKnown RBP14.77□□□□□ -0.05
VTI1A-203ENST00000472892 CHRAC1Q9NRG0 131 aa14.77□□□□□ -0.05
VTI1A-203ENST00000472892 SNX7Q9UNH6 387 aa14.77□□□□□ -0.05
VTI1A-203ENST00000472892 CDYLQ9Y232 598 aa14.77□□□□□ -0.05
VTI1A-203ENST00000472892 TDRKHQ9Y2W6 561 aaKnown RBP14.77□□□□□ -0.05
VTI1A-203ENST00000472892 PCDHGA9Q9Y5G4 932 aaKnown RBP14.77□□□□□ -0.05
VTI1A-203ENST00000472892 RELNP78509 3460 aa14.76□□□□□ -0.05
VTI1A-203ENST00000472892 GOLGA6L6A8MZA4 724 aa14.76□□□□□ -0.05
VTI1A-203ENST00000472892 HCRTR1O43613 425 aa14.76□□□□□ -0.05
VTI1A-203ENST00000472892 KDM1AO60341 852 aa14.76□□□□□ -0.05
VTI1A-203ENST00000472892 GPC4O75487 556 aa14.76□□□□□ -0.05
VTI1A-203ENST00000472892 SPTBP11277 2137 aa14.76□□□□□ -0.05
VTI1A-203ENST00000472892 AGXTP21549 392 aa14.76□□□□□ -0.05
VTI1A-203ENST00000472892 CCL11P51671 97 aa14.76□□□□□ -0.05
VTI1A-203ENST00000472892 PRAMEP78395 509 aa14.76□□□□□ -0.05
VTI1A-203ENST00000472892 KIR2DS3Q14952 304 aa14.76□□□□□ -0.05
VTI1A-203ENST00000472892 NCF4Q15080 339 aa14.76□□□□□ -0.05
VTI1A-203ENST00000472892 KYNUQ16719 465 aa14.76□□□□□ -0.05
VTI1A-203ENST00000472892 PTCHD3Q3KNS1 767 aa14.76□□□□□ -0.05
VTI1A-203ENST00000472892 FAM69BQ5VUD6 431 aa14.76□□□□□ -0.05
VTI1A-203ENST00000472892 C4orf22Q6V702 233 aa14.76□□□□□ -0.05
VTI1A-203ENST00000472892 ZNF662Q6ZS27 426 aa14.76□□□□□ -0.05
VTI1A-203ENST00000472892 VRK3Q8IV63 474 aa14.76□□□□□ -0.05
VTI1A-203ENST00000472892 GPR135Q8IZ08 494 aa14.76□□□□□ -0.05
VTI1A-203ENST00000472892 PPHLN1Q8NEY8 458 aaKnown RBP14.76□□□□□ -0.05
VTI1A-203ENST00000472892 ASZ1Q8WWH4 475 aa14.76□□□□□ -0.05
VTI1A-203ENST00000472892 MIB2Q96AX9 1013 aa14.76□□□□□ -0.05
VTI1A-203ENST00000472892 DHRS4Q9BTZ2 278 aa14.76□□□□□ -0.05
VTI1A-203ENST00000472892 MENTQ9BUN1 341 aa14.76□□□□□ -0.05
VTI1A-203ENST00000472892 SLC25A23Q9BV35 468 aa14.76□□□□□ -0.05
VTI1A-203ENST00000472892 TSSK1BQ9BXA7 367 aa14.76□□□□□ -0.05
VTI1A-203ENST00000472892 SLC7A5P2Q9GIP4 190 aa14.76□□□□□ -0.05
VTI1A-203ENST00000472892 SPRTNQ9H040 489 aaPredicted RBP14.76□□□□□ -0.05
VTI1A-203ENST00000472892 ACSS2Q9NR19 701 aa14.76□□□□□ -0.05
VTI1A-203ENST00000472892 EIF2B3Q9NR50 452 aaKnown RBP14.76□□□□□ -0.05
VTI1A-203ENST00000472892 AP1M2Q9Y6Q5 423 aa14.76□□□□□ -0.05
VTI1A-203ENST00000472892 SPENQ96T58 3664 aaKnown RBP14.76□□□□□ -0.05
VTI1A-203ENST00000472892 A0A0J9YY10 115 aa14.75□□□□□ -0.05
VTI1A-203ENST00000472892 IQCF5A8MTL0 148 aa14.75□□□□□ -0.05
VTI1A-203ENST00000472892 CEACAM4O75871 244 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms