RNA–Protein interactions for RNA: ENST00000472880.1

COL9A3-210, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 959 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-210ENST00000472880 PSMA3P25788 255 aa19.1■□□□□ 0.65
COL9A3-210ENST00000472880 RRADP55042 308 aa19.1■□□□□ 0.65
COL9A3-210ENST00000472880 PLOD1Q02809 727 aaPredicted RBP19.1■□□□□ 0.65
COL9A3-210ENST00000472880 DEFB110Q30KQ9 67 aa19.1■□□□□ 0.65
COL9A3-210ENST00000472880 NADK2Q4G0N4 442 aa19.1■□□□□ 0.65
COL9A3-210ENST00000472880 LYPLAL1Q5VWZ2 237 aa19.1■□□□□ 0.65
COL9A3-210ENST00000472880 AFTPHQ6ULP2 937 aa19.1■□□□□ 0.65
COL9A3-210ENST00000472880 PPP1R21Q6ZMI0 780 aa19.1■□□□□ 0.65
COL9A3-210ENST00000472880 UNC5AQ6ZN44 842 aa19.1■□□□□ 0.65
COL9A3-210ENST00000472880 TMEM102Q8N9M5 508 aaPredicted RBP19.1■□□□□ 0.65
COL9A3-210ENST00000472880 ATG4AQ8WYN0 398 aa19.1■□□□□ 0.65
COL9A3-210ENST00000472880 TCTN2Q96GX1 697 aa19.1■□□□□ 0.65
COL9A3-210ENST00000472880 TTC1Q99614 292 aa19.1■□□□□ 0.65
COL9A3-210ENST00000472880 C17orf62Q9BQA9 187 aa19.1■□□□□ 0.65
COL9A3-210ENST00000472880 DHRS4Q9BTZ2 278 aa19.1■□□□□ 0.65
COL9A3-210ENST00000472880 OR6C2Q9NZP2 312 aa19.1■□□□□ 0.65
COL9A3-210ENST00000472880 PCDHGB7Q9Y5F8 929 aa19.1■□□□□ 0.65
COL9A3-210ENST00000472880 PIKFYVEQ9Y2I7 2098 aa19.1■□□□□ 0.65
COL9A3-210ENST00000472880 COL12A1Q99715 3063 aa19.09■□□□□ 0.65
COL9A3-210ENST00000472880 A0A0J9YY10 115 aa19.09■□□□□ 0.65
COL9A3-210ENST00000472880 HEATR9A2RTY3 570 aa19.09■□□□□ 0.65
COL9A3-210ENST00000472880 CEACAM4O75871 244 aa19.09■□□□□ 0.65
COL9A3-210ENST00000472880 OR2B3O76000 313 aa19.09■□□□□ 0.65
COL9A3-210ENST00000472880 ACADLP28330 430 aa19.09■□□□□ 0.65
COL9A3-210ENST00000472880 NAPRTQ6XQN6 538 aa19.09■□□□□ 0.65
COL9A3-210ENST00000472880 MED25Q71SY5 747 aa19.09■□□□□ 0.65
COL9A3-210ENST00000472880 OR5K2Q8NHB8 316 aa19.09■□□□□ 0.65
COL9A3-210ENST00000472880 OR2A14Q96R47 310 aa19.09■□□□□ 0.65
COL9A3-210ENST00000472880 DESI2Q9BSY9 194 aa19.09■□□□□ 0.65
COL9A3-210ENST00000472880 FAM60AQ9NP50 221 aa19.09■□□□□ 0.65
COL9A3-210ENST00000472880 IMPACTQ9P2X3 320 aa19.09■□□□□ 0.65
COL9A3-210ENST00000472880 AP1M2Q9Y6Q5 423 aa19.09■□□□□ 0.65
COL9A3-210ENST00000472880 RELNP78509 3460 aa19.08■□□□□ 0.65
COL9A3-210ENST00000472880 SLC5A10A0PJK1 596 aa19.08■□□□□ 0.64
COL9A3-210ENST00000472880 E7EVH7 732 aa19.08■□□□□ 0.64
COL9A3-210ENST00000472880 ZNF185O15231 689 aa19.08■□□□□ 0.64
COL9A3-210ENST00000472880 DPM1O60762 260 aa19.08■□□□□ 0.64
COL9A3-210ENST00000472880 GP1BBP13224 206 aa19.08■□□□□ 0.64
COL9A3-210ENST00000472880 CDC25BP30305 580 aa19.08■□□□□ 0.64
COL9A3-210ENST00000472880 STIP1P31948 543 aaKnown RBP19.08■□□□□ 0.64
COL9A3-210ENST00000472880 UQCRFS1P47985 274 aa19.08■□□□□ 0.64
COL9A3-210ENST00000472880 ATP1A4Q13733 1029 aa19.08■□□□□ 0.64
COL9A3-210ENST00000472880 SEL1L2Q5TEA6 688 aa19.08■□□□□ 0.64
COL9A3-210ENST00000472880 ZNF385CQ66K41 422 aaPredicted RBP19.08■□□□□ 0.64
COL9A3-210ENST00000472880 HPS6Q86YV9 775 aa19.08■□□□□ 0.64
COL9A3-210ENST00000472880 ZBTB2Q8N680 514 aa19.08■□□□□ 0.64
COL9A3-210ENST00000472880 GALNT11Q8NCW6 608 aa19.08■□□□□ 0.64
COL9A3-210ENST00000472880 FDCSPQ8NFU4 85 aa19.08■□□□□ 0.64
COL9A3-210ENST00000472880 OR13J1Q8NGT2 312 aa19.08■□□□□ 0.64
COL9A3-210ENST00000472880 SGSM3Q96HU1 749 aa19.08■□□□□ 0.64
COL9A3-210ENST00000472880 HES6Q96HZ4 224 aa19.08■□□□□ 0.64
COL9A3-210ENST00000472880 IRAK4Q9NWZ3 460 aa19.08■□□□□ 0.64
COL9A3-210ENST00000472880 SPHK1Q9NYA1 384 aa19.08■□□□□ 0.64
COL9A3-210ENST00000472880 GPR83Q9NYM4 423 aa19.08■□□□□ 0.64
COL9A3-210ENST00000472880 GPN3Q9UHW5 284 aaPredicted RBP19.08■□□□□ 0.64
COL9A3-210ENST00000472880 PLAGL1Q9UM63 463 aa19.08■□□□□ 0.64
COL9A3-210ENST00000472880 CAPN6Q9Y6Q1 641 aa19.08■□□□□ 0.64
COL9A3-210ENST00000472880 A0A0U1RQJ8 604 aa19.07■□□□□ 0.64
COL9A3-210ENST00000472880 A6NL46 340 aa19.07■□□□□ 0.64
COL9A3-210ENST00000472880 ISM1B1AKI9 464 aa19.07■□□□□ 0.64
COL9A3-210ENST00000472880 BHMG1C9JSJ3 638 aaPredicted RBP19.07■□□□□ 0.64
COL9A3-210ENST00000472880 OR1I1O60431 355 aa19.07■□□□□ 0.64
COL9A3-210ENST00000472880 SORBS2O94875 1100 aaKnown RBP19.07■□□□□ 0.64
COL9A3-210ENST00000472880 GOT2P00505 430 aaKnown RBP19.07■□□□□ 0.64
COL9A3-210ENST00000472880 IFNB1P01574 187 aa19.07■□□□□ 0.64
COL9A3-210ENST00000472880 OTX2P32243 289 aa19.07■□□□□ 0.64
COL9A3-210ENST00000472880 FDFT1P37268 417 aa19.07■□□□□ 0.64
COL9A3-210ENST00000472880 CSE1LP55060 971 aaKnown RBP19.07■□□□□ 0.64
COL9A3-210ENST00000472880 ZIC1Q15915 447 aa19.07■□□□□ 0.64
COL9A3-210ENST00000472880 TSTD2Q5T7W7 516 aa19.07■□□□□ 0.64
COL9A3-210ENST00000472880 C1orf189Q5VU69 101 aa19.07■□□□□ 0.64
COL9A3-210ENST00000472880 MLIPQ5VWP3 458 aa19.07■□□□□ 0.64
COL9A3-210ENST00000472880 RHBDD2Q6NTF9 364 aa19.07■□□□□ 0.64
COL9A3-210ENST00000472880 TMEM139Q8IV31 216 aa19.07■□□□□ 0.64
COL9A3-210ENST00000472880 PROKR1Q8TCW9 393 aa19.07■□□□□ 0.64
COL9A3-210ENST00000472880 HDAC10Q969S8 669 aa19.07■□□□□ 0.64
COL9A3-210ENST00000472880 NUDT9Q9BW91 350 aa19.07■□□□□ 0.64
COL9A3-210ENST00000472880 TSSK1BQ9BXA7 367 aa19.07■□□□□ 0.64
COL9A3-210ENST00000472880 FRMD8P1Q9BZ68 369 aaPredicted RBP19.07■□□□□ 0.64
COL9A3-210ENST00000472880 CHRNA10Q9GZZ6 450 aa19.07■□□□□ 0.64
COL9A3-210ENST00000472880 ETNK1Q9HBU6 452 aa19.07■□□□□ 0.64
COL9A3-210ENST00000472880 TXLNGQ9NUQ3 528 aa19.07■□□□□ 0.64
COL9A3-210ENST00000472880 SLC2A6Q9UGQ3 507 aa19.07■□□□□ 0.64
COL9A3-210ENST00000472880 NDOR1Q9UHB4 597 aa19.07■□□□□ 0.64
COL9A3-210ENST00000472880 SRPK3Q9UPE1 567 aa19.07■□□□□ 0.64
COL9A3-210ENST00000472880 SPTBP11277 2137 aa19.07■□□□□ 0.64
COL9A3-210ENST00000472880 SPENQ96T58 3664 aaKnown RBP19.07■□□□□ 0.64
COL9A3-210ENST00000472880 LRRK2Q5S007 2527 aa19.06■□□□□ 0.64
COL9A3-210ENST00000472880 ZSCAN9O15535 394 aaPredicted RBP19.06■□□□□ 0.64
COL9A3-210ENST00000472880 LIASO43766 372 aa19.06■□□□□ 0.64
COL9A3-210ENST00000472880 ATXN8OSP0DMR3 200 aa19.06■□□□□ 0.64
COL9A3-210ENST00000472880 GNLYP22749 145 aa19.06■□□□□ 0.64
COL9A3-210ENST00000472880 PRAMEP78395 509 aa19.06■□□□□ 0.64
COL9A3-210ENST00000472880 KIR2DS3Q14952 304 aa19.06■□□□□ 0.64
COL9A3-210ENST00000472880 MRGPREQ86SM8 312 aa19.06■□□□□ 0.64
COL9A3-210ENST00000472880 GLIS1Q8NBF1 620 aa19.06■□□□□ 0.64
COL9A3-210ENST00000472880 OR6P1Q8NGX9 317 aa19.06■□□□□ 0.64
COL9A3-210ENST00000472880 FLVCR1-AS1Q8TAF5 88 aa19.06■□□□□ 0.64
COL9A3-210ENST00000472880 IP6K3Q96PC2 410 aa19.06■□□□□ 0.64
COL9A3-210ENST00000472880 RANBP9Q96S59 729 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms