RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 UGT2B7P16662 529 aa21.8■■□□□ 1.08
C9orf3-213ENST00000471978 CHAF1BQ13112 559 aa21.8■■□□□ 1.08
C9orf3-213ENST00000471978 TRIM73Q86UV7 250 aa21.8■■□□□ 1.08
C9orf3-213ENST00000471978 C19orf47Q8N9M1 422 aaKnown RBP21.8■■□□□ 1.08
C9orf3-213ENST00000471978 OR6P1Q8NGX9 317 aa21.8■■□□□ 1.08
C9orf3-213ENST00000471978 OR4L1Q8NH43 312 aa21.8■■□□□ 1.08
C9orf3-213ENST00000471978 OR5K2Q8NHB8 316 aa21.8■■□□□ 1.08
C9orf3-213ENST00000471978 UBE2Q2Q8WVN8 375 aa21.8■■□□□ 1.08
C9orf3-213ENST00000471978 N4BP2L2Q92802 583 aaPredicted RBP21.8■■□□□ 1.08
C9orf3-213ENST00000471978 ZNF778Q96MU6 729 aa21.8■■□□□ 1.08
C9orf3-213ENST00000471978 OR2A14Q96R47 310 aa21.8■■□□□ 1.08
C9orf3-213ENST00000471978 ING2Q9H160 280 aa21.8■■□□□ 1.08
C9orf3-213ENST00000471978 CASS4Q9NQ75 786 aa21.8■■□□□ 1.08
C9orf3-213ENST00000471978 ACSS2Q9NR19 701 aa21.8■■□□□ 1.08
C9orf3-213ENST00000471978 TCFL5Q9UL49 500 aa21.8■■□□□ 1.08
C9orf3-213ENST00000471978 RIMKLBQ9ULI2 386 aa21.8■■□□□ 1.08
C9orf3-213ENST00000471978 PRRC2CQ9Y520 2896 aaKnown RBP21.79■■□□□ 1.08
C9orf3-213ENST00000471978 F8W8V4 182 aa21.79■■□□□ 1.08
C9orf3-213ENST00000471978 ZNF749O43361 778 aa21.79■■□□□ 1.08
C9orf3-213ENST00000471978 KRT86O43790 486 aa21.79■■□□□ 1.08
C9orf3-213ENST00000471978 CAPN1P07384 714 aa21.79■■□□□ 1.08
C9orf3-213ENST00000471978 CHRM5P08912 532 aaPredicted RBP21.79■■□□□ 1.08
C9orf3-213ENST00000471978 TPBGLP0DKB5 382 aa21.79■■□□□ 1.08
C9orf3-213ENST00000471978 CCL11P51671 97 aa21.79■■□□□ 1.08
C9orf3-213ENST00000471978 CSE1LP55060 971 aaKnown RBP21.79■■□□□ 1.08
C9orf3-213ENST00000471978 ACVR1Q04771 509 aa21.79■■□□□ 1.08
C9orf3-213ENST00000471978 PTCHD3Q3KNS1 767 aa21.79■■□□□ 1.08
C9orf3-213ENST00000471978 FAM69BQ5VUD6 431 aa21.79■■□□□ 1.08
C9orf3-213ENST00000471978 FAM198BQ6UWH4 519 aa21.79■■□□□ 1.08
C9orf3-213ENST00000471978 NLRP9Q7RTR0 991 aa21.79■■□□□ 1.08
C9orf3-213ENST00000471978 GPR135Q8IZ08 494 aa21.79■■□□□ 1.08
C9orf3-213ENST00000471978 CCDC89Q8N998 374 aa21.79■■□□□ 1.08
C9orf3-213ENST00000471978 ADAMTS17Q8TE56 1095 aa21.79■■□□□ 1.08
C9orf3-213ENST00000471978 TCTN2Q96GX1 697 aa21.79■■□□□ 1.08
C9orf3-213ENST00000471978 SLC25A23Q9BV35 468 aa21.79■■□□□ 1.08
C9orf3-213ENST00000471978 FAM60AQ9NP50 221 aa21.79■■□□□ 1.08
C9orf3-213ENST00000471978 SPHK1Q9NYA1 384 aa21.79■■□□□ 1.08
C9orf3-213ENST00000471978 OR6C2Q9NZP2 312 aa21.79■■□□□ 1.08
C9orf3-213ENST00000471978 PLAGL1Q9UM63 463 aa21.79■■□□□ 1.08
C9orf3-213ENST00000471978 PLAAQ9Y263 795 aa21.79■■□□□ 1.08
C9orf3-213ENST00000471978 TCAF1Q9Y4C2 921 aa21.79■■□□□ 1.08
C9orf3-213ENST00000471978 GOLGA6L6A8MZA4 724 aa21.78■■□□□ 1.08
C9orf3-213ENST00000471978 APRTP07741 180 aa21.78■■□□□ 1.08
C9orf3-213ENST00000471978 HBQ1P09105 142 aa21.78■■□□□ 1.08
C9orf3-213ENST00000471978 PTGIRP43119 386 aa21.78■■□□□ 1.08
C9orf3-213ENST00000471978 PGDP52209 483 aa21.78■■□□□ 1.08
C9orf3-213ENST00000471978 PRAMEP78395 509 aa21.78■■□□□ 1.08
C9orf3-213ENST00000471978 FASTKD1Q53R41 847 aaKnown RBP21.78■■□□□ 1.08
C9orf3-213ENST00000471978 ZNF534Q76KX8 674 aa21.78■■□□□ 1.08
C9orf3-213ENST00000471978 DPH2Q9BQC3 489 aaPredicted RBP21.78■■□□□ 1.08
C9orf3-213ENST00000471978 PAK5Q9P286 719 aa21.78■■□□□ 1.08
C9orf3-213ENST00000471978 KDM1AO60341 852 aa21.77■■□□□ 1.08
C9orf3-213ENST00000471978 AGXTP21549 392 aa21.77■■□□□ 1.08
C9orf3-213ENST00000471978 CCR7P32248 378 aa21.77■■□□□ 1.08
C9orf3-213ENST00000471978 PPARGP37231 505 aaPredicted RBP21.77■■□□□ 1.08
C9orf3-213ENST00000471978 MLLT10P55197 1068 aa21.77■■□□□ 1.08
C9orf3-213ENST00000471978 SEMA3AQ14563 771 aa21.77■■□□□ 1.08
C9orf3-213ENST00000471978 NCF4Q15080 339 aa21.77■■□□□ 1.08
C9orf3-213ENST00000471978 RPS6KA1Q15418 735 aa21.77■■□□□ 1.08
C9orf3-213ENST00000471978 ZIC1Q15915 447 aa21.77■■□□□ 1.08
C9orf3-213ENST00000471978 DEFB110Q30KQ9 67 aa21.77■■□□□ 1.08
C9orf3-213ENST00000471978 GLIS1Q8NBF1 620 aa21.77■■□□□ 1.08
C9orf3-213ENST00000471978 PPHLN1Q8NEY8 458 aaKnown RBP21.77■■□□□ 1.08
C9orf3-213ENST00000471978 FLVCR1-AS1Q8TAF5 88 aa21.77■■□□□ 1.08
C9orf3-213ENST00000471978 MIB2Q96AX9 1013 aa21.77■■□□□ 1.08
C9orf3-213ENST00000471978 PCDHGA9Q9Y5G4 932 aaKnown RBP21.77■■□□□ 1.08
C9orf3-213ENST00000471978 A0A0J9YY10 115 aa21.76■■□□□ 1.07
C9orf3-213ENST00000471978 C9J4A7 227 aa21.76■■□□□ 1.07
C9orf3-213ENST00000471978 OR2B3O76000 313 aa21.76■■□□□ 1.07
C9orf3-213ENST00000471978 TMEM63AO94886 807 aa21.76■■□□□ 1.07
C9orf3-213ENST00000471978 ZSCAN5DPP0CG00 497 aa21.76■■□□□ 1.07
C9orf3-213ENST00000471978 HSPA14Q0VDF9 509 aa21.76■■□□□ 1.07
C9orf3-213ENST00000471978 DNAJC21Q5F1R6 531 aaKnown RBP21.76■■□□□ 1.07
C9orf3-213ENST00000471978 MEI1Q5TIA1 1274 aa21.76■■□□□ 1.07
C9orf3-213ENST00000471978 SLC22A15Q8IZD6 547 aa21.76■■□□□ 1.07
C9orf3-213ENST00000471978 PEX13Q92968 403 aa21.76■■□□□ 1.07
C9orf3-213ENST00000471978 SGSM3Q96HU1 749 aa21.76■■□□□ 1.07
C9orf3-213ENST00000471978 TSSK1BQ9BXA7 367 aa21.76■■□□□ 1.07
C9orf3-213ENST00000471978 AP1M1Q9BXS5 423 aa21.76■■□□□ 1.07
C9orf3-213ENST00000471978 CHRNA10Q9GZZ6 450 aa21.76■■□□□ 1.07
C9orf3-213ENST00000471978 SPRTNQ9H040 489 aaPredicted RBP21.76■■□□□ 1.07
C9orf3-213ENST00000471978 MLXIPLQ9NP71 852 aa21.76■■□□□ 1.07
C9orf3-213ENST00000471978 ANAPC5Q9UJX4 755 aa21.76■■□□□ 1.07
C9orf3-213ENST00000471978 ISM1B1AKI9 464 aa21.75■■□□□ 1.07
C9orf3-213ENST00000471978 HCRTR1O43613 425 aa21.75■■□□□ 1.07
C9orf3-213ENST00000471978 RPL22P35268 128 aaKnown RBP21.75■■□□□ 1.07
C9orf3-213ENST00000471978 AARS2Q5JTZ9 985 aaKnown RBP21.75■■□□□ 1.07
C9orf3-213ENST00000471978 ZNF385CQ66K41 422 aaPredicted RBP21.75■■□□□ 1.07
C9orf3-213ENST00000471978 VRK3Q8IV63 474 aa21.75■■□□□ 1.07
C9orf3-213ENST00000471978 ASZ1Q8WWH4 475 aa21.75■■□□□ 1.07
C9orf3-213ENST00000471978 CARD6Q9BX69 1037 aa21.75■■□□□ 1.07
C9orf3-213ENST00000471978 CHRAC1Q9NRG0 131 aa21.75■■□□□ 1.07
C9orf3-213ENST00000471978 CATSPERZQ9NTU4 200 aa21.75■■□□□ 1.07
C9orf3-213ENST00000471978 AP1M2Q9Y6Q5 423 aa21.75■■□□□ 1.07
C9orf3-213ENST00000471978 TNRC6AQ8NDV7 1962 aaKnown RBP21.74■■□□□ 1.07
C9orf3-213ENST00000471978 IQCF5A8MTL0 148 aa21.74■■□□□ 1.07
C9orf3-213ENST00000471978 H3BMH7 237 aa21.74■■□□□ 1.07
C9orf3-213ENST00000471978 PEBP1P30086 187 aaKnown RBP21.74■■□□□ 1.07
C9orf3-213ENST00000471978 GABRA4P48169 554 aa21.74■■□□□ 1.07
C9orf3-213ENST00000471978 SESN2P58004 480 aaPredicted RBP21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms