RNA–Protein interactions for RNA: ENST00000469498.1

GAPVD1-213, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 385 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-213ENST00000469498 HCN4Q9Y3Q4 1203 aa8.19□□□□□ -1.1
GAPVD1-213ENST00000469498 OTOGLQ3ZCN5 2332 aa8.19□□□□□ -1.1
GAPVD1-213ENST00000469498 GPR179Q6PRD1 2367 aa8.18□□□□□ -1.1
GAPVD1-213ENST00000469498 COL27A1Q8IZC6 1860 aaPredicted RBP8.18□□□□□ -1.1
GAPVD1-213ENST00000469498 LNP1A1A4G5 178 aa8.18□□□□□ -1.1
GAPVD1-213ENST00000469498 A6NCN8 305 aa8.18□□□□□ -1.1
GAPVD1-213ENST00000469498 ARHGEF33A8MVX0 844 aa8.18□□□□□ -1.1
GAPVD1-213ENST00000469498 SUPT3HB4E1H0 165 aa8.18□□□□□ -1.1
GAPVD1-213ENST00000469498 EIF3FO00303 357 aaPredicted RBP8.18□□□□□ -1.1
GAPVD1-213ENST00000469498 IFRD1O00458 451 aaPredicted RBP8.18□□□□□ -1.1
GAPVD1-213ENST00000469498 KCNJ13O60928 360 aa8.18□□□□□ -1.1
GAPVD1-213ENST00000469498 SUPT3HO75486 399 aa8.18□□□□□ -1.1
GAPVD1-213ENST00000469498 LMNAP02545 664 aaKnown RBP8.18□□□□□ -1.1
GAPVD1-213ENST00000469498 MTHFD1P11586 935 aaKnown RBP8.18□□□□□ -1.1
GAPVD1-213ENST00000469498 COL6A2P12110 1019 aa8.18□□□□□ -1.1
GAPVD1-213ENST00000469498 F3P13726 295 aa8.18□□□□□ -1.1
GAPVD1-213ENST00000469498 NBL1P41271 181 aa8.18□□□□□ -1.1
GAPVD1-213ENST00000469498 KPNA2P52292 529 aaKnown RBP8.18□□□□□ -1.1
GAPVD1-213ENST00000469498 ATXN3P54252 364 aaPredicted RBP8.18□□□□□ -1.1
GAPVD1-213ENST00000469498 WDR4P57081 412 aaKnown RBP8.18□□□□□ -1.1
GAPVD1-213ENST00000469498 ATP6V0D1P61421 351 aa8.18□□□□□ -1.1
GAPVD1-213ENST00000469498 PLOD1Q02809 727 aaPredicted RBP8.18□□□□□ -1.1
GAPVD1-213ENST00000469498 SLC18A2Q05940 514 aa8.18□□□□□ -1.1
GAPVD1-213ENST00000469498 GPS2Q13227 327 aa8.18□□□□□ -1.1
GAPVD1-213ENST00000469498 CLCA4Q14CN2 919 aa8.18□□□□□ -1.1
GAPVD1-213ENST00000469498 PHKG1Q16816 387 aa8.18□□□□□ -1.1
GAPVD1-213ENST00000469498 FAM83EQ2M2I3 478 aa8.18□□□□□ -1.1
GAPVD1-213ENST00000469498 UAP1L1Q3KQV9 507 aa8.18□□□□□ -1.1
GAPVD1-213ENST00000469498 TECRLQ5HYJ1 363 aa8.18□□□□□ -1.1
GAPVD1-213ENST00000469498 AGAP9Q5VTM2 703 aa8.18□□□□□ -1.1
GAPVD1-213ENST00000469498 LVRNQ6Q4G3 990 aa8.18□□□□□ -1.1
GAPVD1-213ENST00000469498 IL27RAQ6UWB1 636 aa8.18□□□□□ -1.1
GAPVD1-213ENST00000469498 MBOAT1Q6ZNC8 495 aa8.18□□□□□ -1.1
GAPVD1-213ENST00000469498 CDHR3Q6ZTQ4 885 aa8.18□□□□□ -1.1
GAPVD1-213ENST00000469498 NEK10Q6ZWH5 1172 aa8.18□□□□□ -1.1
GAPVD1-213ENST00000469498 FRA10AC1Q70Z53 315 aa8.18□□□□□ -1.1
GAPVD1-213ENST00000469498 UBE2R2Q712K3 238 aaPredicted RBP8.18□□□□□ -1.1
GAPVD1-213ENST00000469498 KANSL1Q7Z3B3 1105 aa8.18□□□□□ -1.1
GAPVD1-213ENST00000469498 ADAMTSL2Q86TH1 951 aa8.18□□□□□ -1.1
GAPVD1-213ENST00000469498 MINDY1Q8N5J2 469 aa8.18□□□□□ -1.1
GAPVD1-213ENST00000469498 ANKRD42Q8N9B4 389 aa8.18□□□□□ -1.1
GAPVD1-213ENST00000469498 KYQ8NBH2 561 aa8.18□□□□□ -1.1
GAPVD1-213ENST00000469498 PHC3Q8NDX5 983 aa8.18□□□□□ -1.1
GAPVD1-213ENST00000469498 FAM46DQ8NEK8 389 aa8.18□□□□□ -1.1
GAPVD1-213ENST00000469498 OR5AR1Q8NGP9 310 aa8.18□□□□□ -1.1
GAPVD1-213ENST00000469498 ZDHHC1Q8WTX9 485 aa8.18□□□□□ -1.1
GAPVD1-213ENST00000469498 FOPNLQ96NB1 174 aa8.18□□□□□ -1.1
GAPVD1-213ENST00000469498 GPR78Q96P69 363 aa8.18□□□□□ -1.1
GAPVD1-213ENST00000469498 INSM2Q96T92 566 aaPredicted RBP8.18□□□□□ -1.1
GAPVD1-213ENST00000469498 ZDHHC5Q9C0B5 715 aa8.18□□□□□ -1.1
GAPVD1-213ENST00000469498 KCNH6Q9H252 994 aa8.18□□□□□ -1.1
GAPVD1-213ENST00000469498 DPEP2Q9H4A9 486 aa8.18□□□□□ -1.1
GAPVD1-213ENST00000469498 ZFAND3Q9H8U3 227 aa8.18□□□□□ -1.1
GAPVD1-213ENST00000469498 MKS1Q9NXB0 559 aa8.18□□□□□ -1.1
GAPVD1-213ENST00000469498 PGPEP1Q9NXJ5 209 aa8.18□□□□□ -1.1
GAPVD1-213ENST00000469498 UTP6Q9NYH9 597 aaKnown RBP8.18□□□□□ -1.1
GAPVD1-213ENST00000469498 TMEM216Q9P0N5 145 aa8.18□□□□□ -1.1
GAPVD1-213ENST00000469498 CPSF2Q9P2I0 782 aaKnown RBP8.18□□□□□ -1.1
GAPVD1-213ENST00000469498 SLC17A7Q9P2U7 560 aa8.18□□□□□ -1.1
GAPVD1-213ENST00000469498 XPR1Q9UBH6 696 aa8.18□□□□□ -1.1
GAPVD1-213ENST00000469498 EMCNQ9ULC0 261 aa8.18□□□□□ -1.1
GAPVD1-213ENST00000469498 ACSL5Q9ULC5 683 aa8.18□□□□□ -1.1
GAPVD1-213ENST00000469498 RNF112Q9ULX5 631 aa8.18□□□□□ -1.1
GAPVD1-213ENST00000469498 PLAGL1Q9UM63 463 aa8.18□□□□□ -1.1
GAPVD1-213ENST00000469498 ASF1AQ9Y294 204 aa8.18□□□□□ -1.1
GAPVD1-213ENST00000469498 PRAMEF33A0A0G2JMD5 474 aa8.17□□□□□ -1.1
GAPVD1-213ENST00000469498 TMEM120BA0PK00 339 aa8.17□□□□□ -1.1
GAPVD1-213ENST00000469498 PABPN1LA6NDY0 278 aaKnown RBP8.17□□□□□ -1.1
GAPVD1-213ENST00000469498 NCF1BA6NI72 391 aaPredicted RBP8.17□□□□□ -1.1
GAPVD1-213ENST00000469498 NCF1CA8MVU1 366 aaPredicted RBP8.17□□□□□ -1.1
GAPVD1-213ENST00000469498 LMO7DNF2Z398 122 aa8.17□□□□□ -1.1
GAPVD1-213ENST00000469498 UBXN8O00124 270 aa8.17□□□□□ -1.1
GAPVD1-213ENST00000469498 YY2O15391 372 aa8.17□□□□□ -1.1
GAPVD1-213ENST00000469498 YKT6O15498 198 aa8.17□□□□□ -1.1
GAPVD1-213ENST00000469498 TYROBPO43914 113 aa8.17□□□□□ -1.1
GAPVD1-213ENST00000469498 PSIP1O75475 530 aaKnown RBP8.17□□□□□ -1.1
GAPVD1-213ENST00000469498 ZIC2O95409 532 aaPredicted RBP8.17□□□□□ -1.1
GAPVD1-213ENST00000469498 MATN4O95460 622 aa8.17□□□□□ -1.1
GAPVD1-213ENST00000469498 CATP04040 527 aaKnown RBP8.17□□□□□ -1.1
GAPVD1-213ENST00000469498 PROCP04070 461 aa8.17□□□□□ -1.1
GAPVD1-213ENST00000469498 C8GP07360 202 aa8.17□□□□□ -1.1
GAPVD1-213ENST00000469498 GSTA1P08263 222 aa8.17□□□□□ -1.1
GAPVD1-213ENST00000469498 NCF1P14598 390 aaPredicted RBP8.17□□□□□ -1.1
GAPVD1-213ENST00000469498 CYP2A7P20853 494 aa8.17□□□□□ -1.1
GAPVD1-213ENST00000469498 ACADLP28330 430 aa8.17□□□□□ -1.1
GAPVD1-213ENST00000469498 CRHR1P34998 444 aa8.17□□□□□ -1.1
GAPVD1-213ENST00000469498 RPA3P35244 121 aaPredicted RBP8.17□□□□□ -1.1
GAPVD1-213ENST00000469498 SLC26A3P40879 764 aa8.17□□□□□ -1.1
GAPVD1-213ENST00000469498 RXRGP48443 463 aa8.17□□□□□ -1.1
GAPVD1-213ENST00000469498 CCT5P48643 541 aa8.17□□□□□ -1.1
GAPVD1-213ENST00000469498 MAZP56270 477 aaKnown RBP8.17□□□□□ -1.1
GAPVD1-213ENST00000469498 SP140Q13342 867 aa8.17□□□□□ -1.1
GAPVD1-213ENST00000469498 KRT33BQ14525 404 aa8.17□□□□□ -1.1
GAPVD1-213ENST00000469498 ACAP2Q15057 778 aa8.17□□□□□ -1.1
GAPVD1-213ENST00000469498 RPE65Q16518 533 aa8.17□□□□□ -1.1
GAPVD1-213ENST00000469498 CCSMST1Q4G0I0 132 aa8.17□□□□□ -1.1
GAPVD1-213ENST00000469498 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.17□□□□□ -1.1
GAPVD1-213ENST00000469498 CAPRIN2Q6IMN6 1127 aaKnown RBP8.17□□□□□ -1.1
GAPVD1-213ENST00000469498 SBSNQ6UWP8 590 aa8.17□□□□□ -1.1
GAPVD1-213ENST00000469498 UNC5DQ6UXZ4 953 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms