RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 NOVA2Q9UNW9 492 aaKnown RBP15.56■□□□□ 0.08
GPC1-207ENST00000466624 RUVBL2Q9Y230 463 aaKnown RBP15.56■□□□□ 0.08
GPC1-207ENST00000466624 APOBEC2Q9Y235 224 aaKnown RBP15.56■□□□□ 0.08
GPC1-207ENST00000466624 COL27A1Q8IZC6 1860 aaPredicted RBP15.56■□□□□ 0.08
GPC1-207ENST00000466624 ANKRD12Q6UB98 2062 aa15.56■□□□□ 0.08
GPC1-207ENST00000466624 UNC13CQ8NB66 2214 aa15.56■□□□□ 0.08
GPC1-207ENST00000466624 CNOT1A5YKK6 2376 aaKnown RBP15.55■□□□□ 0.08
GPC1-207ENST00000466624 IGHV1OR21-1A0A087WYE8 117 aa15.55■□□□□ 0.08
GPC1-207ENST00000466624 A0A096LPK6 155 aa15.55■□□□□ 0.08
GPC1-207ENST00000466624 ARHGEF33A8MVX0 844 aa15.55■□□□□ 0.08
GPC1-207ENST00000466624 MYO1CO00159 1063 aa15.55■□□□□ 0.08
GPC1-207ENST00000466624 CCDC166P0CW27 439 aa15.55■□□□□ 0.08
GPC1-207ENST00000466624 COL6A2P12110 1019 aa15.55■□□□□ 0.08
GPC1-207ENST00000466624 CD1DP15813 335 aa15.55■□□□□ 0.08
GPC1-207ENST00000466624 CYP2A7P20853 494 aa15.55■□□□□ 0.08
GPC1-207ENST00000466624 GRB7Q14451 532 aa15.55■□□□□ 0.08
GPC1-207ENST00000466624 PUM1Q14671 1186 aaKnown RBP eCLIP15.55■□□□□ 0.08
GPC1-207ENST00000466624 KLHL35Q6PF15 583 aa15.55■□□□□ 0.08
GPC1-207ENST00000466624 LRIG3Q6UXM1 1119 aa15.55■□□□□ 0.08
GPC1-207ENST00000466624 UBE2R2Q712K3 238 aaPredicted RBP15.55■□□□□ 0.08
GPC1-207ENST00000466624 OR10G6Q8NH81 332 aa15.55■□□□□ 0.08
GPC1-207ENST00000466624 ACMSDQ8TDX5 336 aa15.55■□□□□ 0.08
GPC1-207ENST00000466624 RAB11FIP5Q9BXF6 653 aa15.55■□□□□ 0.08
GPC1-207ENST00000466624 SPATA7Q9P0W8 599 aa15.55■□□□□ 0.08
GPC1-207ENST00000466624 CTNNAL1Q9UBT7 734 aa15.55■□□□□ 0.08
GPC1-207ENST00000466624 TBK1Q9UHD2 729 aa15.55■□□□□ 0.08
GPC1-207ENST00000466624 TSR3Q9UJK0 312 aaKnown RBP15.55■□□□□ 0.08
GPC1-207ENST00000466624 NTN3O00634 580 aaPredicted RBP15.54■□□□□ 0.08
GPC1-207ENST00000466624 B4GAT1O43505 415 aa15.54■□□□□ 0.08
GPC1-207ENST00000466624 DUX1O43812 170 aa15.54■□□□□ 0.08
GPC1-207ENST00000466624 RFPL1O75677 317 aa15.54■□□□□ 0.08
GPC1-207ENST00000466624 UBXN7O94888 489 aa15.54■□□□□ 0.08
GPC1-207ENST00000466624 LTA4HP09960 611 aaKnown RBP15.54■□□□□ 0.08
GPC1-207ENST00000466624 FTH1P19P0C7X4 201 aa15.54■□□□□ 0.08
GPC1-207ENST00000466624 MAP4P27816 1152 aaKnown RBP15.54■□□□□ 0.08
GPC1-207ENST00000466624 ALDH4A1P30038 563 aa15.54■□□□□ 0.08
GPC1-207ENST00000466624 SHMT2P34897 504 aa15.54■□□□□ 0.08
GPC1-207ENST00000466624 BDKRB1P46663 353 aa15.54■□□□□ 0.08
GPC1-207ENST00000466624 SLCO1A2P46721 670 aa15.54■□□□□ 0.08
GPC1-207ENST00000466624 OR1D5P58170 312 aa15.54■□□□□ 0.08
GPC1-207ENST00000466624 SIM1P81133 766 aaPredicted RBP15.54■□□□□ 0.08
GPC1-207ENST00000466624 PRKG2Q13237 762 aa15.54■□□□□ 0.08
GPC1-207ENST00000466624 PLCL1Q15111 1095 aa15.54■□□□□ 0.08
GPC1-207ENST00000466624 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.54■□□□□ 0.08
GPC1-207ENST00000466624 ADAMTSL2Q86TH1 951 aa15.54■□□□□ 0.08
GPC1-207ENST00000466624 LCA5Q86VQ0 697 aa15.54■□□□□ 0.08
GPC1-207ENST00000466624 ZNF761Q86XN6 746 aaPredicted RBP15.54■□□□□ 0.08
GPC1-207ENST00000466624 SPNS2Q8IVW8 549 aa15.54■□□□□ 0.08
GPC1-207ENST00000466624 CENPLQ8N0S6 344 aaPredicted RBP15.54■□□□□ 0.08
GPC1-207ENST00000466624 RAB42Q8N4Z0 105 aa15.54■□□□□ 0.08
GPC1-207ENST00000466624 MCOLN3Q8TDD5 553 aa15.54■□□□□ 0.08
GPC1-207ENST00000466624 LCN9Q8WX39 176 aa15.54■□□□□ 0.08
GPC1-207ENST00000466624 DPYSL5Q9BPU6 564 aa15.54■□□□□ 0.08
GPC1-207ENST00000466624 MENTQ9BUN1 341 aa15.54■□□□□ 0.08
GPC1-207ENST00000466624 TBC1D10AQ9BXI6 508 aa15.54■□□□□ 0.08
GPC1-207ENST00000466624 TWSG1Q9GZX9 223 aa15.54■□□□□ 0.08
GPC1-207ENST00000466624 RAB33BQ9H082 229 aa15.54■□□□□ 0.08
GPC1-207ENST00000466624 LRRN3Q9H3W5 708 aa15.54■□□□□ 0.08
GPC1-207ENST00000466624 RDH14Q9HBH5 336 aa15.54■□□□□ 0.08
GPC1-207ENST00000466624 PARVBQ9HBI1 364 aa15.54■□□□□ 0.08
GPC1-207ENST00000466624 NMRAL1Q9HBL8 299 aa15.54■□□□□ 0.08
GPC1-207ENST00000466624 TDRKHQ9Y2W6 561 aaKnown RBP15.54■□□□□ 0.08
GPC1-207ENST00000466624 CFAP54Q96N23 3096 aa15.54■□□□□ 0.08
GPC1-207ENST00000466624 SPAARA0A1B0GVQ0 90 aa15.53■□□□□ 0.08
GPC1-207ENST00000466624 A0A1W2PQM1 296 aa15.53■□□□□ 0.08
GPC1-207ENST00000466624 BTN3A1O00481 513 aa15.53■□□□□ 0.08
GPC1-207ENST00000466624 GIPC1O14908 333 aa15.53■□□□□ 0.08
GPC1-207ENST00000466624 OPA1O60313 960 aa15.53■□□□□ 0.08
GPC1-207ENST00000466624 KLHL2O95198 593 aa15.53■□□□□ 0.08
GPC1-207ENST00000466624 RPLP0P05388 317 aaKnown RBP15.53■□□□□ 0.08
GPC1-207ENST00000466624 PROS1P07225 676 aa15.53■□□□□ 0.08
GPC1-207ENST00000466624 TPBGLP0DKB5 382 aa15.53■□□□□ 0.08
GPC1-207ENST00000466624 ERGP11308 486 aa15.53■□□□□ 0.08
GPC1-207ENST00000466624 CD1CP29017 333 aa15.53■□□□□ 0.08
GPC1-207ENST00000466624 PKLRP30613 574 aa15.53■□□□□ 0.08
GPC1-207ENST00000466624 HSD17B2P37059 387 aa15.53■□□□□ 0.08
GPC1-207ENST00000466624 CAPZBP47756 277 aa15.53■□□□□ 0.08
GPC1-207ENST00000466624 RAB28P51157 221 aa15.53■□□□□ 0.08
GPC1-207ENST00000466624 AP1S2P56377 157 aa15.53■□□□□ 0.08
GPC1-207ENST00000466624 ZNF844Q08AG5 666 aa15.53■□□□□ 0.08
GPC1-207ENST00000466624 CSHL1Q14406 222 aa15.53■□□□□ 0.08
GPC1-207ENST00000466624 ARHGAP19Q14CB8 494 aa15.53■□□□□ 0.08
GPC1-207ENST00000466624 PPP1R3AQ16821 1122 aa15.53■□□□□ 0.08
GPC1-207ENST00000466624 FAM83EQ2M2I3 478 aa15.53■□□□□ 0.08
GPC1-207ENST00000466624 SBSNQ6UWP8 590 aa15.53■□□□□ 0.08
GPC1-207ENST00000466624 CLEC14AQ86T13 490 aa15.53■□□□□ 0.08
GPC1-207ENST00000466624 SLCO6A1Q86UG4 719 aa15.53■□□□□ 0.08
GPC1-207ENST00000466624 AMIGO1Q86WK6 493 aa15.53■□□□□ 0.08
GPC1-207ENST00000466624 Q8N9G6 341 aaPredicted RBP15.53■□□□□ 0.08
GPC1-207ENST00000466624 OR9A1PQ8NGU1 263 aa15.53■□□□□ 0.08
GPC1-207ENST00000466624 HMGCLL1Q8TB92 370 aa15.53■□□□□ 0.08
GPC1-207ENST00000466624 DLG3Q92796 817 aa15.53■□□□□ 0.08
GPC1-207ENST00000466624 KIAA1191Q96A73 305 aa15.53■□□□□ 0.08
GPC1-207ENST00000466624 AHCYL2Q96HN2 611 aaKnown RBP15.53■□□□□ 0.08
GPC1-207ENST00000466624 ZIM3Q96PE6 472 aa15.53■□□□□ 0.08
GPC1-207ENST00000466624 TRIM54Q9BYV2 358 aa15.53■□□□□ 0.08
GPC1-207ENST00000466624 SRMSQ9H3Y6 488 aa15.53■□□□□ 0.08
GPC1-207ENST00000466624 IGSF5Q9NSI5 407 aa15.53■□□□□ 0.08
GPC1-207ENST00000466624 OR6C2Q9NZP2 312 aa15.53■□□□□ 0.08
GPC1-207ENST00000466624 ADAMTS6Q9UKP5 1117 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms