RNA–Protein interactions for RNA: ENST00000465950.5

SCAF11-205, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 5,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-205ENST00000465950 ABCB1P08183 1280 aaPredicted RBP9.26□□□□□ -0.93
SCAF11-205ENST00000465950 CXCR1P25024 350 aa9.26□□□□□ -0.93
SCAF11-205ENST00000465950 SLC26A3P40879 764 aa9.26□□□□□ -0.93
SCAF11-205ENST00000465950 KCNJ1P48048 391 aa9.26□□□□□ -0.93
SCAF11-205ENST00000465950 PTDSS1P48651 473 aaKnown RBP9.26□□□□□ -0.93
SCAF11-205ENST00000465950 CSNK1DP48730 415 aa9.26□□□□□ -0.93
SCAF11-205ENST00000465950 CASP9P55211 416 aa9.26□□□□□ -0.93
SCAF11-205ENST00000465950 FAM189A2Q15884 450 aa9.26□□□□□ -0.93
SCAF11-205ENST00000465950 SAMD4BQ5PRF9 694 aaKnown RBP9.26□□□□□ -0.93
SCAF11-205ENST00000465950 PLEKHA7Q6IQ23 1121 aa9.26□□□□□ -0.93
SCAF11-205ENST00000465950 ZNF621Q6ZSS3 439 aa9.26□□□□□ -0.93
SCAF11-205ENST00000465950 RNF44Q7L0R7 432 aa9.26□□□□□ -0.93
SCAF11-205ENST00000465950 FUKQ8N0W3 1084 aa9.26□□□□□ -0.93
SCAF11-205ENST00000465950 OR52K1Q8NGK4 314 aa9.26□□□□□ -0.93
SCAF11-205ENST00000465950 OR9A1PQ8NGU1 263 aa9.26□□□□□ -0.93
SCAF11-205ENST00000465950 DNAJB8Q8NHS0 232 aa9.26□□□□□ -0.93
SCAF11-205ENST00000465950 SMPDL3BQ92485 455 aa9.26□□□□□ -0.93
SCAF11-205ENST00000465950 MUCL1Q96DR8 90 aa9.26□□□□□ -0.93
SCAF11-205ENST00000465950 THAP10Q9P2Z0 257 aaPredicted RBP9.26□□□□□ -0.93
SCAF11-205ENST00000465950 CROTQ9UKG9 612 aa9.26□□□□□ -0.93
SCAF11-205ENST00000465950 MYOM1P52179 1685 aa9.26□□□□□ -0.93
SCAF11-205ENST00000465950 HOXC11O43248 304 aaPredicted RBP9.26□□□□□ -0.93
SCAF11-205ENST00000465950 CDC40O60508 579 aaKnown RBP eCLIP9.26□□□□□ -0.93
SCAF11-205ENST00000465950 PRPS2P11908 318 aa9.26□□□□□ -0.93
SCAF11-205ENST00000465950 ACPPP15309 386 aa9.26□□□□□ -0.93
SCAF11-205ENST00000465950 CUL3Q13618 768 aa9.26□□□□□ -0.93
SCAF11-205ENST00000465950 CARTPTQ16568 116 aa9.26□□□□□ -0.93
SCAF11-205ENST00000465950 TSTD2Q5T7W7 516 aa9.26□□□□□ -0.93
SCAF11-205ENST00000465950 ERICH5Q6P6B1 374 aa9.26□□□□□ -0.93
SCAF11-205ENST00000465950 XKR5Q6UX68 686 aa9.26□□□□□ -0.93
SCAF11-205ENST00000465950 RPTNQ6XPR3 784 aa9.26□□□□□ -0.93
SCAF11-205ENST00000465950 RNF111Q6ZNA4 994 aa9.26□□□□□ -0.93
SCAF11-205ENST00000465950 KCNK18Q7Z418 384 aa9.26□□□□□ -0.93
SCAF11-205ENST00000465950 ASPGQ86U10 573 aa9.26□□□□□ -0.93
SCAF11-205ENST00000465950 TBC1D21Q8IYX1 336 aa9.26□□□□□ -0.93
SCAF11-205ENST00000465950 PIK3C3Q8NEB9 887 aa9.26□□□□□ -0.93
SCAF11-205ENST00000465950 TRIB3Q96RU7 358 aa9.26□□□□□ -0.93
SCAF11-205ENST00000465950 SMG9Q9H0W8 520 aaKnown RBP9.26□□□□□ -0.93
SCAF11-205ENST00000465950 B4GALT6Q9UBX8 382 aa9.26□□□□□ -0.93
SCAF11-205ENST00000465950 COQ4Q9Y3A0 265 aa9.26□□□□□ -0.93
SCAF11-205ENST00000465950 FAM237BA0A1B0GVD1 139 aa9.26□□□□□ -0.93
SCAF11-205ENST00000465950 ARHGAP33O14559 1287 aa9.26□□□□□ -0.93
SCAF11-205ENST00000465950 RPLP0P05388 317 aaKnown RBP9.26□□□□□ -0.93
SCAF11-205ENST00000465950 RUNX1T1Q06455 604 aa9.26□□□□□ -0.93
SCAF11-205ENST00000465950 PDK4Q16654 411 aa9.26□□□□□ -0.93
SCAF11-205ENST00000465950 DPH2Q9BQC3 489 aaPredicted RBP9.26□□□□□ -0.93
SCAF11-205ENST00000465950 ASPNQ9BXN1 380 aa9.26□□□□□ -0.93
SCAF11-205ENST00000465950 UGT2B28Q9BY64 529 aa9.26□□□□□ -0.93
SCAF11-205ENST00000465950 ULBP3Q9BZM4 244 aa9.26□□□□□ -0.93
SCAF11-205ENST00000465950 HOXD1Q9GZZ0 328 aa9.26□□□□□ -0.93
SCAF11-205ENST00000465950 EMC3Q9P0I2 261 aa9.26□□□□□ -0.93
SCAF11-205ENST00000465950 BTBD17A6NE02 478 aa9.25□□□□□ -0.93
SCAF11-205ENST00000465950 SERPINI2O75830 405 aa9.25□□□□□ -0.93
SCAF11-205ENST00000465950 MAP3K6O95382 1288 aa9.25□□□□□ -0.93
SCAF11-205ENST00000465950 AK1P00568 194 aa9.25□□□□□ -0.93
SCAF11-205ENST00000465950 RPSAP08865 295 aaKnown RBP9.25□□□□□ -0.93
SCAF11-205ENST00000465950 SLURP2P0DP57 97 aa9.25□□□□□ -0.93
SCAF11-205ENST00000465950 KITP10721 976 aa9.25□□□□□ -0.93
SCAF11-205ENST00000465950 ARSAP15289 507 aa9.25□□□□□ -0.93
SCAF11-205ENST00000465950 POLR2CP19387 275 aaPredicted RBP9.25□□□□□ -0.93
SCAF11-205ENST00000465950 ASPAP45381 313 aa9.25□□□□□ -0.93
SCAF11-205ENST00000465950 DSC2Q02487 901 aa9.25□□□□□ -0.93
SCAF11-205ENST00000465950 PTPN20Q4JDL3 420 aa9.25□□□□□ -0.93
SCAF11-205ENST00000465950 ARCQ7LC44 396 aa9.25□□□□□ -0.93
SCAF11-205ENST00000465950 ACVR1CQ8NER5 493 aa9.25□□□□□ -0.93
SCAF11-205ENST00000465950 SLC13A3Q8WWT9 602 aa9.25□□□□□ -0.93
SCAF11-205ENST00000465950 SLC39A3Q9BRY0 314 aa9.25□□□□□ -0.93
SCAF11-205ENST00000465950 YIPF4Q9BSR8 244 aa9.25□□□□□ -0.93
SCAF11-205ENST00000465950 WASH6PQ9NQA3 447 aa9.25□□□□□ -0.93
SCAF11-205ENST00000465950 NFKBIL1Q9UBC1 381 aaPredicted RBP9.25□□□□□ -0.93
SCAF11-205ENST00000465950 DKK3Q9UBP4 350 aa9.25□□□□□ -0.93
SCAF11-205ENST00000465950 NDRG3Q9UGV2 375 aa9.25□□□□□ -0.93
SCAF11-205ENST00000465950 WBP11Q9Y2W2 641 aaKnown RBP9.25□□□□□ -0.93
SCAF11-205ENST00000465950 TCAF1Q9Y4C2 921 aa9.25□□□□□ -0.93
SCAF11-205ENST00000465950 OR6C74A6NCV1 312 aa9.25□□□□□ -0.93
SCAF11-205ENST00000465950 IGLON5A6NGN9 336 aa9.25□□□□□ -0.93
SCAF11-205ENST00000465950 EIF3FO00303 357 aaPredicted RBP9.25□□□□□ -0.93
SCAF11-205ENST00000465950 PGLSO95336 258 aa9.25□□□□□ -0.93
SCAF11-205ENST00000465950 ZBTB11O95625 1053 aaPredicted RBP9.25□□□□□ -0.93
SCAF11-205ENST00000465950 FAM228BP0C875 321 aa9.25□□□□□ -0.93
SCAF11-205ENST00000465950 ZNF84P51523 738 aa9.25□□□□□ -0.93
SCAF11-205ENST00000465950 C1orf61Q13536 156 aa9.25□□□□□ -0.93
SCAF11-205ENST00000465950 CES3Q6UWW8 571 aa9.25□□□□□ -0.93
SCAF11-205ENST00000465950 RAB11FIP2Q7L804 512 aa9.25□□□□□ -0.93
SCAF11-205ENST00000465950 ZNF571Q7Z3V5 609 aaPredicted RBP9.25□□□□□ -0.93
SCAF11-205ENST00000465950 ZNF440Q8IYI8 595 aa9.25□□□□□ -0.93
SCAF11-205ENST00000465950 SLC44A3Q8N4M1 653 aa9.25□□□□□ -0.93
SCAF11-205ENST00000465950 SPATA4Q8NEY3 305 aa9.25□□□□□ -0.93
SCAF11-205ENST00000465950 RNASE11Q8TAA1 199 aaKnown RBP9.25□□□□□ -0.93
SCAF11-205ENST00000465950 CYP2S1Q96SQ9 504 aa9.25□□□□□ -0.93
SCAF11-205ENST00000465950 PITHD1Q9GZP4 211 aaPredicted RBP9.25□□□□□ -0.93
SCAF11-205ENST00000465950 SNX15Q9NRS6 342 aa9.25□□□□□ -0.93
SCAF11-205ENST00000465950 ADAM30Q9UKF2 790 aa9.25□□□□□ -0.93
SCAF11-205ENST00000465950 AFDNP55196 1824 aaKnown RBP9.25□□□□□ -0.93
SCAF11-205ENST00000465950 TMEM8BA6NDV4 472 aa9.25□□□□□ -0.93
SCAF11-205ENST00000465950 ZNF487B1APH4 448 aa9.25□□□□□ -0.93
SCAF11-205ENST00000465950 TGFB1I1O43294 461 aa9.25□□□□□ -0.93
SCAF11-205ENST00000465950 PTHP01270 115 aa9.25□□□□□ -0.93
SCAF11-205ENST00000465950 SERPINE1P05121 402 aa9.25□□□□□ -0.93
SCAF11-205ENST00000465950 CDH15P55291 814 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms