RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 CCM2Q9BSQ5 444 aa21.24■□□□□ 0.99
PDLIM2-216ENST00000464275 SLC29A3Q9BZD2 475 aa21.24■□□□□ 0.99
PDLIM2-216ENST00000464275 HEBP1Q9NRV9 189 aa21.24■□□□□ 0.99
PDLIM2-216ENST00000464275 CKAP5Q14008 2032 aa21.23■□□□□ 0.99
PDLIM2-216ENST00000464275 LOC730098B7Z3J9 87 aa21.23■□□□□ 0.99
PDLIM2-216ENST00000464275 C1QTNF3-AMACRE9PGA6 284 aa21.23■□□□□ 0.99
PDLIM2-216ENST00000464275 H0YJX3 145 aa21.23■□□□□ 0.99
PDLIM2-216ENST00000464275 SLC28A1O00337 649 aa21.23■□□□□ 0.99
PDLIM2-216ENST00000464275 PABPC4LP0CB38 370 aaKnown RBP21.23■□□□□ 0.99
PDLIM2-216ENST00000464275 IL12RB1P42701 662 aa21.23■□□□□ 0.99
PDLIM2-216ENST00000464275 KCNK10P57789 538 aa21.23■□□□□ 0.99
PDLIM2-216ENST00000464275 CREB5Q02930 508 aa21.23■□□□□ 0.99
PDLIM2-216ENST00000464275 HYAL1Q12794 435 aa21.23■□□□□ 0.99
PDLIM2-216ENST00000464275 TRAP1Q12931 704 aaKnown RBP21.23■□□□□ 0.99
PDLIM2-216ENST00000464275 VPS26BQ4G0F5 336 aa21.23■□□□□ 0.99
PDLIM2-216ENST00000464275 PRMT9Q6P2P2 845 aa21.23■□□□□ 0.99
PDLIM2-216ENST00000464275 LAYNQ6UX15 382 aa21.23■□□□□ 0.99
PDLIM2-216ENST00000464275 RNF148Q8N7C7 305 aa21.23■□□□□ 0.99
PDLIM2-216ENST00000464275 SPDYE1Q8NFV5 336 aaPredicted RBP21.23■□□□□ 0.99
PDLIM2-216ENST00000464275 NUS1Q96E22 293 aa21.23■□□□□ 0.99
PDLIM2-216ENST00000464275 PPP3R2Q96LZ3 170 aa21.23■□□□□ 0.99
PDLIM2-216ENST00000464275 SH3GL3Q99963 347 aa21.23■□□□□ 0.99
PDLIM2-216ENST00000464275 HOPXQ9BPY8 73 aaPredicted RBP21.23■□□□□ 0.99
PDLIM2-216ENST00000464275 C1orf50Q9BV19 199 aa21.23■□□□□ 0.99
PDLIM2-216ENST00000464275 EPHX3Q9H6B9 360 aa21.23■□□□□ 0.99
PDLIM2-216ENST00000464275 SLC52A3Q9NQ40 469 aa21.23■□□□□ 0.99
PDLIM2-216ENST00000464275 TMEM181Q9P2C4 612 aa21.23■□□□□ 0.99
PDLIM2-216ENST00000464275 MAP10Q9P2G4 905 aa21.23■□□□□ 0.99
PDLIM2-216ENST00000464275 COQ6Q9Y2Z9 468 aa21.23■□□□□ 0.99
PDLIM2-216ENST00000464275 ACOT8O14734 319 aa21.23■□□□□ 0.99
PDLIM2-216ENST00000464275 LSM1O15116 133 aaKnown RBP21.23■□□□□ 0.99
PDLIM2-216ENST00000464275 RGS14O43566 566 aa21.23■□□□□ 0.99
PDLIM2-216ENST00000464275 TSPAN6O43657 245 aa21.23■□□□□ 0.99
PDLIM2-216ENST00000464275 SLC22A3O75751 556 aa21.23■□□□□ 0.99
PDLIM2-216ENST00000464275 PSMC3P17980 439 aa21.23■□□□□ 0.99
PDLIM2-216ENST00000464275 SLC6A12P48065 614 aa21.23■□□□□ 0.99
PDLIM2-216ENST00000464275 CTSCP53634 463 aa21.23■□□□□ 0.99
PDLIM2-216ENST00000464275 MS4A2Q01362 244 aa21.23■□□□□ 0.99
PDLIM2-216ENST00000464275 NR6A1Q15406 480 aa21.23■□□□□ 0.99
PDLIM2-216ENST00000464275 SMU1Q2TAY7 513 aa21.23■□□□□ 0.99
PDLIM2-216ENST00000464275 SYTL3Q4VX76 610 aa21.23■□□□□ 0.99
PDLIM2-216ENST00000464275 IRAK1BP1Q5VVH5 260 aa21.23■□□□□ 0.99
PDLIM2-216ENST00000464275 UGT2A3Q6UWM9 527 aa21.23■□□□□ 0.99
PDLIM2-216ENST00000464275 ERN2Q76MJ5 926 aaKnown RBP21.23■□□□□ 0.99
PDLIM2-216ENST00000464275 BHLHE22Q8NFJ8 381 aaPredicted RBP21.23■□□□□ 0.99
PDLIM2-216ENST00000464275 NCSTNQ92542 709 aa21.23■□□□□ 0.99
PDLIM2-216ENST00000464275 GLMNQ92990 594 aa21.23■□□□□ 0.99
PDLIM2-216ENST00000464275 GID8Q9NWU2 228 aa21.23■□□□□ 0.99
PDLIM2-216ENST00000464275 RNF11Q9Y3C5 154 aa21.23■□□□□ 0.99
PDLIM2-216ENST00000464275 INPP4BO15327 924 aa21.22■□□□□ 0.99
PDLIM2-216ENST00000464275 RECQL5O94762 991 aaPredicted RBP21.22■□□□□ 0.99
PDLIM2-216ENST00000464275 KAT7O95251 611 aa21.22■□□□□ 0.99
PDLIM2-216ENST00000464275 CLDN9O95484 217 aa21.22■□□□□ 0.99
PDLIM2-216ENST00000464275 GSTM1P09488 218 aa21.22■□□□□ 0.99
PDLIM2-216ENST00000464275 MRPS22P82650 360 aaKnown RBP21.22■□□□□ 0.99
PDLIM2-216ENST00000464275 GSTM4Q03013 218 aa21.22■□□□□ 0.99
PDLIM2-216ENST00000464275 SAMD4BQ5PRF9 694 aaKnown RBP21.22■□□□□ 0.99
PDLIM2-216ENST00000464275 CWF19L1Q69YN2 538 aaKnown RBP21.22■□□□□ 0.99
PDLIM2-216ENST00000464275 TMEM220Q6QAJ8 160 aa21.22■□□□□ 0.99
PDLIM2-216ENST00000464275 NLRP8Q86W28 1048 aa21.22■□□□□ 0.99
PDLIM2-216ENST00000464275 TMEM159Q96B96 161 aa21.22■□□□□ 0.99
PDLIM2-216ENST00000464275 ELSPBP1Q96BH3 223 aa21.22■□□□□ 0.99
PDLIM2-216ENST00000464275 MYADMQ96S97 322 aa21.22■□□□□ 0.99
PDLIM2-216ENST00000464275 P2RY13Q9BPV8 354 aa21.22■□□□□ 0.99
PDLIM2-216ENST00000464275 KLQ9UEF7 1012 aa21.22■□□□□ 0.99
PDLIM2-216ENST00000464275 CNOT6Q9ULM6 557 aaKnown RBP21.22■□□□□ 0.99
PDLIM2-216ENST00000464275 CCL27Q9Y4X3 112 aa21.22■□□□□ 0.99
PDLIM2-216ENST00000464275 A0A1W2PP18 115 aa21.21■□□□□ 0.99
PDLIM2-216ENST00000464275 LZTS3O60299 673 aaPredicted RBP21.21■□□□□ 0.99
PDLIM2-216ENST00000464275 C6P13671 934 aa21.21■□□□□ 0.99
PDLIM2-216ENST00000464275 UFM1P61960 85 aa21.21■□□□□ 0.99
PDLIM2-216ENST00000464275 RCAN2Q14206 197 aa21.21■□□□□ 0.99
PDLIM2-216ENST00000464275 AP5B1Q2VPB7 878 aa21.21■□□□□ 0.99
PDLIM2-216ENST00000464275 ATAT1Q5SQI0 421 aa21.21■□□□□ 0.99
PDLIM2-216ENST00000464275 MMAAQ8IVH4 418 aaKnown RBP21.21■□□□□ 0.99
PDLIM2-216ENST00000464275 GPATCH1Q9BRR8 931 aaKnown RBP21.21■□□□□ 0.99
PDLIM2-216ENST00000464275 HDAC8Q9BY41 377 aa21.21■□□□□ 0.99
PDLIM2-216ENST00000464275 ZCCHC2Q9C0B9 1178 aaKnown RBP21.21■□□□□ 0.99
PDLIM2-216ENST00000464275 PRSS16Q9NQE7 514 aa21.21■□□□□ 0.99
PDLIM2-216ENST00000464275 CD300AQ9UGN4 299 aa21.21■□□□□ 0.99
PDLIM2-216ENST00000464275 SLC5A10A0PJK1 596 aa21.21■□□□□ 0.99
PDLIM2-216ENST00000464275 FAM234BA2RU67 622 aa21.21■□□□□ 0.99
PDLIM2-216ENST00000464275 PLK4O00444 970 aa21.21■□□□□ 0.99
PDLIM2-216ENST00000464275 MANBAO00462 879 aa21.21■□□□□ 0.99
PDLIM2-216ENST00000464275 ULK1O75385 1050 aa21.21■□□□□ 0.99
PDLIM2-216ENST00000464275 PSIP1O75475 530 aaKnown RBP21.21■□□□□ 0.99
PDLIM2-216ENST00000464275 SOD1P00441 154 aa21.21■□□□□ 0.99
PDLIM2-216ENST00000464275 EPHX1P07099 455 aa21.21■□□□□ 0.99
PDLIM2-216ENST00000464275 C8BP07358 591 aa21.21■□□□□ 0.99
PDLIM2-216ENST00000464275 GRIA2P42262 883 aa21.21■□□□□ 0.99
PDLIM2-216ENST00000464275 MAPK9P45984 424 aa21.21■□□□□ 0.99
PDLIM2-216ENST00000464275 ZFP36L2P47974 494 aaKnown RBP21.21■□□□□ 0.99
PDLIM2-216ENST00000464275 POLR2JP52435 117 aaKnown RBP21.21■□□□□ 0.99
PDLIM2-216ENST00000464275 DPTQ07507 201 aa21.21■□□□□ 0.99
PDLIM2-216ENST00000464275 FOXM1Q08050 763 aa21.21■□□□□ 0.99
PDLIM2-216ENST00000464275 TRIM25Q14258 630 aaKnown RBP21.21■□□□□ 0.99
PDLIM2-216ENST00000464275 TRIM46Q7Z4K8 759 aa21.21■□□□□ 0.99
PDLIM2-216ENST00000464275 MINDY1Q8N5J2 469 aa21.21■□□□□ 0.99
PDLIM2-216ENST00000464275 RAB7BQ96AH8 199 aa21.21■□□□□ 0.99
PDLIM2-216ENST00000464275 FBXL8Q96CD0 374 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms