RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 IL17BQ9UHF5 180 aa12.57□□□□□ -0.4
XRN1-203ENST00000463916 RUVBL2Q9Y230 463 aaKnown RBP12.57□□□□□ -0.4
XRN1-203ENST00000463916 KRT87PA6NCN2 255 aa12.56□□□□□ -0.4
XRN1-203ENST00000463916 ERVH48-1M5A8F1 160 aa12.56□□□□□ -0.4
XRN1-203ENST00000463916 APOA4P06727 396 aa12.56□□□□□ -0.4
XRN1-203ENST00000463916 ARL4DP49703 201 aa12.56□□□□□ -0.4
XRN1-203ENST00000463916 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.56□□□□□ -0.4
XRN1-203ENST00000463916 PRAMEF17Q5VTA0 474 aa12.56□□□□□ -0.4
XRN1-203ENST00000463916 ARMC3Q5W041 872 aa12.56□□□□□ -0.4
XRN1-203ENST00000463916 ZNF470Q6ECI4 717 aa12.56□□□□□ -0.4
XRN1-203ENST00000463916 OTOAQ7RTW8 1153 aa12.56□□□□□ -0.4
XRN1-203ENST00000463916 LRRC6Q86X45 466 aa12.56□□□□□ -0.4
XRN1-203ENST00000463916 IGDCC3Q8IVU1 814 aa12.56□□□□□ -0.4
XRN1-203ENST00000463916 SLC39A7Q92504 469 aa12.56□□□□□ -0.4
XRN1-203ENST00000463916 ZNF501Q96CX3 271 aaPredicted RBP12.56□□□□□ -0.4
XRN1-203ENST00000463916 OR2A14Q96R47 310 aa12.56□□□□□ -0.4
XRN1-203ENST00000463916 TCF12Q99081 682 aa12.56□□□□□ -0.4
XRN1-203ENST00000463916 TSSK1BQ9BXA7 367 aa12.56□□□□□ -0.4
XRN1-203ENST00000463916 SLC12A9Q9BXP2 914 aa12.56□□□□□ -0.4
XRN1-203ENST00000463916 PDE7BQ9NP56 450 aa12.56□□□□□ -0.4
XRN1-203ENST00000463916 POLG2Q9UHN1 485 aa12.56□□□□□ -0.4
XRN1-203ENST00000463916 LNPEPQ9UIQ6 1025 aa12.56□□□□□ -0.4
XRN1-203ENST00000463916 BTRCQ9Y297 605 aa12.56□□□□□ -0.4
XRN1-203ENST00000463916 NFS1Q9Y697 457 aa12.56□□□□□ -0.4
XRN1-203ENST00000463916 C2orf74A8MZ97 194 aa12.55□□□□□ -0.4
XRN1-203ENST00000463916 F8W8V4 182 aa12.55□□□□□ -0.4
XRN1-203ENST00000463916 MATN2O00339 956 aa12.55□□□□□ -0.4
XRN1-203ENST00000463916 TP73O15350 636 aa12.55□□□□□ -0.4
XRN1-203ENST00000463916 USP1O94782 785 aa12.55□□□□□ -0.4
XRN1-203ENST00000463916 NTRK1P04629 796 aa12.55□□□□□ -0.4
XRN1-203ENST00000463916 CHRM5P08912 532 aaPredicted RBP12.55□□□□□ -0.4
XRN1-203ENST00000463916 SPTBP11277 2137 aa12.55□□□□□ -0.4
XRN1-203ENST00000463916 PAMP19021 973 aa12.55□□□□□ -0.4
XRN1-203ENST00000463916 PEBP1P30086 187 aaKnown RBP12.55□□□□□ -0.4
XRN1-203ENST00000463916 SHMT2P34897 504 aa12.55□□□□□ -0.4
XRN1-203ENST00000463916 STAT5AP42229 794 aa12.55□□□□□ -0.4
XRN1-203ENST00000463916 ADARP55265 1226 aaKnown RBP12.55□□□□□ -0.4
XRN1-203ENST00000463916 RHDQ02161 417 aa12.55□□□□□ -0.4
XRN1-203ENST00000463916 ABHD18Q0P651 414 aa12.55□□□□□ -0.4
XRN1-203ENST00000463916 CCSMST1Q4G0I0 132 aa12.55□□□□□ -0.4
XRN1-203ENST00000463916 DNAJC21Q5F1R6 531 aaKnown RBP12.55□□□□□ -0.4
XRN1-203ENST00000463916 IZUMO3Q5VZ72 239 aa12.55□□□□□ -0.4
XRN1-203ENST00000463916 TRIM73Q86UV7 250 aa12.55□□□□□ -0.4
XRN1-203ENST00000463916 FAM20CQ8IXL6 584 aa12.55□□□□□ -0.4
XRN1-203ENST00000463916 CARFQ8N187 725 aa12.55□□□□□ -0.4
XRN1-203ENST00000463916 C2orf73Q8N5S3 287 aaPredicted RBP12.55□□□□□ -0.4
XRN1-203ENST00000463916 LINC01555Q8NAE3 123 aa12.55□□□□□ -0.4
XRN1-203ENST00000463916 SLC38A9Q8NBW4 561 aa12.55□□□□□ -0.4
XRN1-203ENST00000463916 TRAPPC9Q96Q05 1148 aa12.55□□□□□ -0.4
XRN1-203ENST00000463916 PANX3Q96QZ0 392 aa12.55□□□□□ -0.4
XRN1-203ENST00000463916 TRIM51Q9BSJ1 452 aa12.55□□□□□ -0.4
XRN1-203ENST00000463916 SEMA4CQ9C0C4 833 aa12.55□□□□□ -0.4
XRN1-203ENST00000463916 SOHLH2Q9NX45 425 aa12.55□□□□□ -0.4
XRN1-203ENST00000463916 RARRES3Q9UL19 164 aa12.55□□□□□ -0.4
XRN1-203ENST00000463916 PIPSLA2A3N6 862 aa12.55□□□□□ -0.4
XRN1-203ENST00000463916 TTI1O43156 1089 aa12.55□□□□□ -0.4
XRN1-203ENST00000463916 HCRTR1O43613 425 aa12.55□□□□□ -0.4
XRN1-203ENST00000463916 UGT2B7P16662 529 aa12.55□□□□□ -0.4
XRN1-203ENST00000463916 OGNP20774 298 aaKnown RBP12.55□□□□□ -0.4
XRN1-203ENST00000463916 TUBB4BP68371 445 aa12.55□□□□□ -0.4
XRN1-203ENST00000463916 MRPS25P82663 173 aaKnown RBP12.55□□□□□ -0.4
XRN1-203ENST00000463916 DR1Q01658 176 aa12.55□□□□□ -0.4
XRN1-203ENST00000463916 ACY1Q03154 408 aa12.55□□□□□ -0.4
XRN1-203ENST00000463916 DHX9Q08211 1270 aaKnown RBP12.55□□□□□ -0.4
XRN1-203ENST00000463916 TUBB2AQ13885 445 aa12.55□□□□□ -0.4
XRN1-203ENST00000463916 LY6DQ14210 128 aa12.55□□□□□ -0.4
XRN1-203ENST00000463916 ZIC1Q15915 447 aa12.55□□□□□ -0.4
XRN1-203ENST00000463916 RNF187Q5TA31 235 aaPredicted RBP12.55□□□□□ -0.4
XRN1-203ENST00000463916 ZNF549Q6P9A3 640 aa12.55□□□□□ -0.4
XRN1-203ENST00000463916 SPESP1Q6UW49 350 aa12.55□□□□□ -0.4
XRN1-203ENST00000463916 C6orf15Q6UXA7 325 aaPredicted RBP12.55□□□□□ -0.4
XRN1-203ENST00000463916 EXTL1Q92935 676 aa12.55□□□□□ -0.4
XRN1-203ENST00000463916 STAMBPL1Q96FJ0 436 aa12.55□□□□□ -0.4
XRN1-203ENST00000463916 IL17FQ96PD4 163 aa12.55□□□□□ -0.4
XRN1-203ENST00000463916 SLC30A3Q99726 388 aa12.55□□□□□ -0.4
XRN1-203ENST00000463916 TUBB2BQ9BVA1 445 aa12.55□□□□□ -0.4
XRN1-203ENST00000463916 GPN2Q9H9Y4 310 aaPredicted RBP12.55□□□□□ -0.4
XRN1-203ENST00000463916 PLAC1Q9HBJ0 212 aa12.55□□□□□ -0.4
XRN1-203ENST00000463916 FAM60AQ9NP50 221 aa12.55□□□□□ -0.4
XRN1-203ENST00000463916 FBXO6Q9NRD1 293 aaPredicted RBP12.55□□□□□ -0.4
XRN1-203ENST00000463916 KCND1Q9NSA2 647 aa12.55□□□□□ -0.4
XRN1-203ENST00000463916 C20orf96Q9NUD7 363 aaPredicted RBP12.55□□□□□ -0.4
XRN1-203ENST00000463916 TSR3Q9UJK0 312 aaKnown RBP12.55□□□□□ -0.4
XRN1-203ENST00000463916 MED16Q9Y2X0 877 aa12.55□□□□□ -0.4
XRN1-203ENST00000463916 MRPS18BQ9Y676 258 aaKnown RBP12.55□□□□□ -0.4
XRN1-203ENST00000463916 FAM169AQ9Y6X4 670 aa12.55□□□□□ -0.4
XRN1-203ENST00000463916 NKX2-8O15522 239 aa12.54□□□□□ -0.4
XRN1-203ENST00000463916 C1QL1O75973 258 aa12.54□□□□□ -0.4
XRN1-203ENST00000463916 ESR1P03372 595 aa12.54□□□□□ -0.4
XRN1-203ENST00000463916 SLC1A2P43004 574 aa12.54□□□□□ -0.4
XRN1-203ENST00000463916 MAP7Q14244 749 aa12.54□□□□□ -0.4
XRN1-203ENST00000463916 GBX1Q14549 363 aa12.54□□□□□ -0.4
XRN1-203ENST00000463916 KYNUQ16719 465 aa12.54□□□□□ -0.4
XRN1-203ENST00000463916 LINC00303Q3SY05 128 aa12.54□□□□□ -0.4
XRN1-203ENST00000463916 HSP90AA5PQ58FG0 334 aa12.54□□□□□ -0.4
XRN1-203ENST00000463916 HP1BP3Q5SSJ5 553 aaPredicted RBP12.54□□□□□ -0.4
XRN1-203ENST00000463916 ESX1Q8N693 406 aa12.54□□□□□ -0.4
XRN1-203ENST00000463916 OR6C2Q9NZP2 312 aa12.54□□□□□ -0.4
XRN1-203ENST00000463916 TERTO14746 1132 aaKnown RBP12.53□□□□□ -0.4
XRN1-203ENST00000463916 SNRNP200O75643 2136 aaKnown RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms