RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 ACTR3BQ9P1U1 418 aa2.85□□□□□ -1.95
HPS3-203ENST00000460822 MTUS1Q9ULD2 1270 aa2.85□□□□□ -1.95
HPS3-203ENST00000460822 ABT1Q9ULW3 272 aaKnown RBP2.85□□□□□ -1.95
HPS3-203ENST00000460822 RABL2BQ9UNT1 228 aa2.85□□□□□ -1.95
HPS3-203ENST00000460822 PIN4Q9Y237 131 aaKnown RBP2.85□□□□□ -1.95
HPS3-203ENST00000460822 GRIP1Q9Y3R0 1128 aa2.85□□□□□ -1.95
HPS3-203ENST00000460822 HECW1Q76N89 1606 aa2.85□□□□□ -1.95
HPS3-203ENST00000460822 CCDC18Q5T9S5 1454 aa2.85□□□□□ -1.95
HPS3-203ENST00000460822 ZBED9Q6R2W3 1325 aa2.85□□□□□ -1.95
HPS3-203ENST00000460822 CUX1P39880 1505 aa2.85□□□□□ -1.95
HPS3-203ENST00000460822 RGSL1A5PLK6 1076 aa2.85□□□□□ -1.95
HPS3-203ENST00000460822 E5RJQ4 531 aa2.85□□□□□ -1.95
HPS3-203ENST00000460822 H0YGN5 161 aa2.85□□□□□ -1.95
HPS3-203ENST00000460822 OR10H2O60403 315 aa2.85□□□□□ -1.95
HPS3-203ENST00000460822 CNOT3O75175 753 aaKnown RBP2.85□□□□□ -1.95
HPS3-203ENST00000460822 ARSBP15848 533 aa2.85□□□□□ -1.95
HPS3-203ENST00000460822 NAGAP17050 411 aa2.85□□□□□ -1.95
HPS3-203ENST00000460822 ANP32AP39687 249 aaKnown RBP2.85□□□□□ -1.95
HPS3-203ENST00000460822 RFX5P48382 616 aaPredicted RBP2.85□□□□□ -1.95
HPS3-203ENST00000460822 KHKP50053 298 aa2.85□□□□□ -1.95
HPS3-203ENST00000460822 CLCNKAP51800 687 aa2.85□□□□□ -1.95
HPS3-203ENST00000460822 CTSCP53634 463 aa2.85□□□□□ -1.95
HPS3-203ENST00000460822 MAPK12P53778 367 aa2.85□□□□□ -1.95
HPS3-203ENST00000460822 ZP1P60852 638 aa2.85□□□□□ -1.95
HPS3-203ENST00000460822 COG7P83436 770 aa2.85□□□□□ -1.95
HPS3-203ENST00000460822 KLHL30Q0D2K2 578 aa2.85□□□□□ -1.95
HPS3-203ENST00000460822 GAGE2BQ13066 116 aa2.85□□□□□ -1.95
HPS3-203ENST00000460822 TRAF1Q13077 416 aa2.85□□□□□ -1.95
HPS3-203ENST00000460822 RPS6KA1Q15418 735 aa2.85□□□□□ -1.95
HPS3-203ENST00000460822 CDO1Q16878 200 aa2.85□□□□□ -1.95
HPS3-203ENST00000460822 WSCD2Q2TBF2 565 aa2.85□□□□□ -1.95
HPS3-203ENST00000460822 ODF3L2Q3SX64 289 aa2.85□□□□□ -1.95
HPS3-203ENST00000460822 Q4G0T1 1027 aa2.85□□□□□ -1.95
HPS3-203ENST00000460822 GAGE2EQ4V326 116 aa2.85□□□□□ -1.95
HPS3-203ENST00000460822 MDH1BQ5I0G3 518 aa2.85□□□□□ -1.95
HPS3-203ENST00000460822 GCNT6Q5T4J0 391 aa2.85□□□□□ -1.95
HPS3-203ENST00000460822 TXNRD3NBQ6F5E7 133 aa2.85□□□□□ -1.95
HPS3-203ENST00000460822 ETFRF1Q6IPR1 90 aa2.85□□□□□ -1.95
HPS3-203ENST00000460822 TYW3Q6IPR3 259 aaKnown RBP2.85□□□□□ -1.95
HPS3-203ENST00000460822 GAGE2AQ6NT46 116 aa2.85□□□□□ -1.95
HPS3-203ENST00000460822 MFSD12Q6NUT3 480 aa2.85□□□□□ -1.95
HPS3-203ENST00000460822 RGMBQ6NW40 437 aa2.85□□□□□ -1.95
HPS3-203ENST00000460822 CASC4Q6P4E1 433 aa2.85□□□□□ -1.95
HPS3-203ENST00000460822 NHLRC1Q6VVB1 395 aa2.85□□□□□ -1.95
HPS3-203ENST00000460822 Q6ZTK2 550 aa2.85□□□□□ -1.95
HPS3-203ENST00000460822 FAM114A1Q8IWE2 563 aa2.85□□□□□ -1.95
HPS3-203ENST00000460822 CHERPQ8IWX8 916 aaKnown RBP2.85□□□□□ -1.95
HPS3-203ENST00000460822 TMEM199Q8N511 208 aa2.85□□□□□ -1.95
HPS3-203ENST00000460822 NANOGP1Q8N7R0 232 aa2.85□□□□□ -1.95
HPS3-203ENST00000460822 Q8N9P0 234 aaPredicted RBP2.85□□□□□ -1.95
HPS3-203ENST00000460822 ZBTB44Q8NCP5 570 aa2.85□□□□□ -1.95
HPS3-203ENST00000460822 LPCAT1Q8NF37 534 aa2.85□□□□□ -1.95
HPS3-203ENST00000460822 PSMA8Q8TAA3 256 aa2.85□□□□□ -1.95
HPS3-203ENST00000460822 SYN2Q92777 582 aaPredicted RBP2.85□□□□□ -1.95
HPS3-203ENST00000460822 ZBTB9Q96C00 473 aa2.85□□□□□ -1.95
HPS3-203ENST00000460822 KLHL5Q96PQ7 755 aa2.85□□□□□ -1.95
HPS3-203ENST00000460822 PCYT2Q99447 389 aa2.85□□□□□ -1.95
HPS3-203ENST00000460822 NOX4Q9NPH5 578 aa2.85□□□□□ -1.95
HPS3-203ENST00000460822 KRCC1Q9NPI7 259 aaPredicted RBP2.85□□□□□ -1.95
HPS3-203ENST00000460822 NPAP1Q9NZP6 1156 aa2.85□□□□□ -1.95
HPS3-203ENST00000460822 TRPC4Q9UBN4 977 aa2.85□□□□□ -1.95
HPS3-203ENST00000460822 GAGE2DQ9UEU5 116 aa2.85□□□□□ -1.95
HPS3-203ENST00000460822 FBXW2Q9UKT8 454 aa2.85□□□□□ -1.95
HPS3-203ENST00000460822 STX8Q9UNK0 236 aa2.85□□□□□ -1.95
HPS3-203ENST00000460822 GCC2Q8IWJ2 1684 aa2.85□□□□□ -1.95
HPS3-203ENST00000460822 LRRIQ1Q96JM4 1722 aa2.84□□□□□ -1.95
HPS3-203ENST00000460822 AKNAQ7Z591 1439 aa2.84□□□□□ -1.95
HPS3-203ENST00000460822 KIF27Q86VH2 1401 aa2.84□□□□□ -1.95
HPS3-203ENST00000460822 UACAQ9BZF9 1416 aa2.84□□□□□ -1.95
HPS3-203ENST00000460822 A0A1W2PP11 408 aa2.84□□□□□ -1.95
HPS3-203ENST00000460822 SYCE3A1L190 88 aa2.84□□□□□ -1.95
HPS3-203ENST00000460822 OR2M5A3KFT3 312 aa2.84□□□□□ -1.95
HPS3-203ENST00000460822 BECN2A8MW95 431 aa2.84□□□□□ -1.95
HPS3-203ENST00000460822 NME6O75414 186 aaPredicted RBP2.84□□□□□ -1.95
HPS3-203ENST00000460822 AKAP3O75969 853 aa2.84□□□□□ -1.95
HPS3-203ENST00000460822 REC8O95072 547 aa2.84□□□□□ -1.95
HPS3-203ENST00000460822 EPN2O95208 641 aa2.84□□□□□ -1.95
HPS3-203ENST00000460822 SLC16A8O95907 504 aa2.84□□□□□ -1.95
HPS3-203ENST00000460822 CH25HO95992 272 aa2.84□□□□□ -1.95
HPS3-203ENST00000460822 GH1P01241 217 aa2.84□□□□□ -1.95
HPS3-203ENST00000460822 CYP1A2P05177 515 aa2.84□□□□□ -1.95
HPS3-203ENST00000460822 EPORP19235 508 aa2.84□□□□□ -1.95
HPS3-203ENST00000460822 CD27P26842 260 aa2.84□□□□□ -1.95
HPS3-203ENST00000460822 HOXA11P31270 313 aaPredicted RBP2.84□□□□□ -1.95
HPS3-203ENST00000460822 TIA1P31483 386 aaKnown RBP eCLIP2.84□□□□□ -1.95
HPS3-203ENST00000460822 CTNNB1P35222 781 aa2.84□□□□□ -1.95
HPS3-203ENST00000460822 RABIFP47224 123 aa2.84□□□□□ -1.95
HPS3-203ENST00000460822 LHX1P48742 406 aa2.84□□□□□ -1.95
HPS3-203ENST00000460822 GMPSP49915 693 aaPredicted RBP2.84□□□□□ -1.95
HPS3-203ENST00000460822 MXI1P50539 228 aa2.84□□□□□ -1.95
HPS3-203ENST00000460822 TKTL1P51854 596 aa2.84□□□□□ -1.95
HPS3-203ENST00000460822 CASP9P55211 416 aa2.84□□□□□ -1.95
HPS3-203ENST00000460822 KIAA1024LP59773 190 aa2.84□□□□□ -1.95
HPS3-203ENST00000460822 SEC61BP60468 96 aaKnown RBP2.84□□□□□ -1.95
HPS3-203ENST00000460822 HTD2P86397 168 aa2.84□□□□□ -1.95
HPS3-203ENST00000460822 PRKCZQ05513 592 aa2.84□□□□□ -1.95
HPS3-203ENST00000460822 CRYZQ08257 329 aaKnown RBP2.84□□□□□ -1.95
HPS3-203ENST00000460822 IQCCQ4KMZ1 466 aa2.84□□□□□ -1.95
HPS3-203ENST00000460822 C10orf25Q5T742 122 aa2.84□□□□□ -1.95
HPS3-203ENST00000460822 KRTAP5-4Q6L8H1 288 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms