RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 LATS2Q9NRM7 1088 aa15.62■□□□□ 0.09
COL7A1-203ENST00000459756 KCND1Q9NSA2 647 aa15.62■□□□□ 0.09
COL7A1-203ENST00000459756 IL17BQ9UHF5 180 aa15.62■□□□□ 0.09
COL7A1-203ENST00000459756 CROTQ9UKG9 612 aa15.62■□□□□ 0.09
COL7A1-203ENST00000459756 TDRKHQ9Y2W6 561 aaKnown RBP15.62■□□□□ 0.09
COL7A1-203ENST00000459756 FASNP49327 2511 aaKnown RBP15.62■□□□□ 0.09
COL7A1-203ENST00000459756 FAM237BA0A1B0GVD1 139 aa15.61■□□□□ 0.09
COL7A1-203ENST00000459756 PIPSLA2A3N6 862 aa15.61■□□□□ 0.09
COL7A1-203ENST00000459756 ZNF185O15231 689 aa15.61■□□□□ 0.09
COL7A1-203ENST00000459756 SFTPCP11686 197 aa15.61■□□□□ 0.09
COL7A1-203ENST00000459756 DLSTP36957 453 aa15.61■□□□□ 0.09
COL7A1-203ENST00000459756 TYSND1Q2T9J0 566 aa15.61■□□□□ 0.09
COL7A1-203ENST00000459756 BORAQ6PGQ7 559 aa15.61■□□□□ 0.09
COL7A1-203ENST00000459756 SPESP1Q6UW49 350 aa15.61■□□□□ 0.09
COL7A1-203ENST00000459756 UNC5DQ6UXZ4 953 aa15.61■□□□□ 0.09
COL7A1-203ENST00000459756 HOOK3Q86VS8 718 aa15.61■□□□□ 0.09
COL7A1-203ENST00000459756 TMEM126BQ8IUX1 230 aa15.61■□□□□ 0.09
COL7A1-203ENST00000459756 VRK3Q8IV63 474 aa15.61■□□□□ 0.09
COL7A1-203ENST00000459756 KRT222Q8N1A0 295 aa15.61■□□□□ 0.09
COL7A1-203ENST00000459756 EXD3Q8N9H8 876 aa15.61■□□□□ 0.09
COL7A1-203ENST00000459756 GSDMBQ8TAX9 411 aa15.61■□□□□ 0.09
COL7A1-203ENST00000459756 STARD8Q92502 1023 aa15.61■□□□□ 0.09
COL7A1-203ENST00000459756 RNF31Q96EP0 1072 aa15.61■□□□□ 0.09
COL7A1-203ENST00000459756 SERPINB12Q96P63 405 aa15.61■□□□□ 0.09
COL7A1-203ENST00000459756 TRAPPC9Q96Q05 1148 aa15.61■□□□□ 0.09
COL7A1-203ENST00000459756 SEMA4CQ9C0C4 833 aa15.61■□□□□ 0.09
COL7A1-203ENST00000459756 KCND3Q9UK17 655 aa15.61■□□□□ 0.09
COL7A1-203ENST00000459756 COL6A6A6NMZ7 2263 aa15.6■□□□□ 0.09
COL7A1-203ENST00000459756 GOLGA8KD6RF30 607 aa15.6■□□□□ 0.09
COL7A1-203ENST00000459756 H3BMM5 538 aa15.6■□□□□ 0.09
COL7A1-203ENST00000459756 GOLGA8TH3BQL2 631 aa15.6■□□□□ 0.09
COL7A1-203ENST00000459756 GOLGA8MH3BSY2 632 aa15.6■□□□□ 0.09
COL7A1-203ENST00000459756 TERTO14746 1132 aaKnown RBP15.6■□□□□ 0.09
COL7A1-203ENST00000459756 NKX2-8O15522 239 aa15.6■□□□□ 0.09
COL7A1-203ENST00000459756 CPNE3O75131 537 aaKnown RBP15.6■□□□□ 0.09
COL7A1-203ENST00000459756 SCRG1O75711 98 aa15.6■□□□□ 0.09
COL7A1-203ENST00000459756 NTRK1P04629 796 aa15.6■□□□□ 0.09
COL7A1-203ENST00000459756 CHRM5P08912 532 aaPredicted RBP15.6■□□□□ 0.09
COL7A1-203ENST00000459756 TPBGLP0DKB5 382 aa15.6■□□□□ 0.09
COL7A1-203ENST00000459756 ST6GAL1P15907 406 aa15.6■□□□□ 0.09
COL7A1-203ENST00000459756 TCN2P20062 427 aa15.6■□□□□ 0.09
COL7A1-203ENST00000459756 OGNP20774 298 aaKnown RBP15.6■□□□□ 0.09
COL7A1-203ENST00000459756 ADARP55265 1226 aaKnown RBP15.6■□□□□ 0.09
COL7A1-203ENST00000459756 EIF3BP55884 814 aaKnown RBP15.6■□□□□ 0.09
COL7A1-203ENST00000459756 CDC20Q12834 499 aa15.6■□□□□ 0.09
COL7A1-203ENST00000459756 ABRQ12979 859 aa15.6■□□□□ 0.09
COL7A1-203ENST00000459756 PPP1R7Q15435 360 aa15.6■□□□□ 0.09
COL7A1-203ENST00000459756 NEPROQ6NW34 567 aa15.6■□□□□ 0.09
COL7A1-203ENST00000459756 OTOAQ7RTW8 1153 aa15.6■□□□□ 0.09
COL7A1-203ENST00000459756 LPGAT1Q92604 370 aa15.6■□□□□ 0.09
COL7A1-203ENST00000459756 TWSG1Q9GZX9 223 aa15.6■□□□□ 0.09
COL7A1-203ENST00000459756 LHX9Q9NQ69 397 aa15.6■□□□□ 0.09
COL7A1-203ENST00000459756 VPS9D1Q9Y2B5 631 aa15.6■□□□□ 0.09
COL7A1-203ENST00000459756 PCDHB3Q9Y5E6 796 aa15.6■□□□□ 0.09
COL7A1-203ENST00000459756 C21orf140B9A014 251 aa15.59■□□□□ 0.09
COL7A1-203ENST00000459756 ESR1P03372 595 aa15.59■□□□□ 0.09
COL7A1-203ENST00000459756 FAM87AP0C7U9 286 aa15.59■□□□□ 0.09
COL7A1-203ENST00000459756 UGT2B7P16662 529 aa15.59■□□□□ 0.09
COL7A1-203ENST00000459756 F8A1P23610 371 aa15.59■□□□□ 0.09
COL7A1-203ENST00000459756 MAGEA3P43357 314 aa15.59■□□□□ 0.09
COL7A1-203ENST00000459756 RAB28P51157 221 aa15.59■□□□□ 0.09
COL7A1-203ENST00000459756 GNG11P61952 73 aa15.59■□□□□ 0.09
COL7A1-203ENST00000459756 DHX34Q14147 1143 aaKnown RBP15.59■□□□□ 0.09
COL7A1-203ENST00000459756 KIR2DS3Q14952 304 aa15.59■□□□□ 0.09
COL7A1-203ENST00000459756 KYNUQ16719 465 aa15.59■□□□□ 0.09
COL7A1-203ENST00000459756 ANKRD20A4Q4UJ75 823 aa15.59■□□□□ 0.09
COL7A1-203ENST00000459756 CTSL3PQ5NE16 218 aa15.59■□□□□ 0.09
COL7A1-203ENST00000459756 TMEM135Q86UB9 458 aa15.59■□□□□ 0.09
COL7A1-203ENST00000459756 DCUN1D3Q8IWE4 304 aa15.59■□□□□ 0.09
COL7A1-203ENST00000459756 PPIL6Q8IXY8 311 aa15.59■□□□□ 0.09
COL7A1-203ENST00000459756 NAT8LQ8N9F0 302 aa15.59■□□□□ 0.09
COL7A1-203ENST00000459756 CFAP61Q8NHU2 1237 aa15.59■□□□□ 0.09
COL7A1-203ENST00000459756 SLCO2A1Q92959 643 aa15.59■□□□□ 0.09
COL7A1-203ENST00000459756 ZNF669Q96BR6 464 aaPredicted RBP15.59■□□□□ 0.09
COL7A1-203ENST00000459756 BIRC8Q96P09 236 aa15.59■□□□□ 0.09
COL7A1-203ENST00000459756 OR2A14Q96R47 310 aa15.59■□□□□ 0.09
COL7A1-203ENST00000459756 CHRNA10Q9GZZ6 450 aa15.59■□□□□ 0.09
COL7A1-203ENST00000459756 SPHK1Q9NYA1 384 aa15.59■□□□□ 0.09
COL7A1-203ENST00000459756 PLAGL1Q9UM63 463 aa15.59■□□□□ 0.09
COL7A1-203ENST00000459756 PCDHGA6Q9Y5G7 932 aa15.59■□□□□ 0.09
COL7A1-203ENST00000459756 MRFAP1Q9Y605 127 aa15.59■□□□□ 0.09
COL7A1-203ENST00000459756 TMEM150CB9EJG8 249 aa15.58■□□□□ 0.08
COL7A1-203ENST00000459756 PRKAR1AP10644 381 aa15.58■□□□□ 0.08
COL7A1-203ENST00000459756 PVRP15151 417 aa15.58■□□□□ 0.08
COL7A1-203ENST00000459756 PKLRP30613 574 aa15.58■□□□□ 0.08
COL7A1-203ENST00000459756 FMO4P31512 558 aa15.58■□□□□ 0.08
COL7A1-203ENST00000459756 CCR10P46092 362 aa15.58■□□□□ 0.08
COL7A1-203ENST00000459756 DNASE1L3Q13609 305 aa15.58■□□□□ 0.08
COL7A1-203ENST00000459756 PLEKHS1Q5SXH7 462 aa15.58■□□□□ 0.08
COL7A1-203ENST00000459756 TTC23LQ6PF05 361 aa15.58■□□□□ 0.08
COL7A1-203ENST00000459756 CILP2Q8IUL8 1156 aa15.58■□□□□ 0.08
COL7A1-203ENST00000459756 C19orf47Q8N9M1 422 aaKnown RBP15.58■□□□□ 0.08
COL7A1-203ENST00000459756 FLVCR1-AS1Q8TAF5 88 aa15.58■□□□□ 0.08
COL7A1-203ENST00000459756 CT55Q8WUE5 264 aa15.58■□□□□ 0.08
COL7A1-203ENST00000459756 TRIM44Q96DX7 344 aaPredicted RBP15.58■□□□□ 0.08
COL7A1-203ENST00000459756 TCTN2Q96GX1 697 aa15.58■□□□□ 0.08
COL7A1-203ENST00000459756 LRFN5Q96NI6 719 aa15.58■□□□□ 0.08
COL7A1-203ENST00000459756 GPR87Q9BY21 358 aa15.58■□□□□ 0.08
COL7A1-203ENST00000459756 KLHL25Q9H0H3 589 aa15.58■□□□□ 0.08
COL7A1-203ENST00000459756 DDX47Q9H0S4 455 aaKnown RBP15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms