RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 PSMD3O43242 534 aa20.81■□□□□ 0.92
CPNE1-220ENST00000458038 OR2B3O76000 313 aa20.81■□□□□ 0.92
CPNE1-220ENST00000458038 FTH1P02794 183 aa20.81■□□□□ 0.92
CPNE1-220ENST00000458038 PVRP15151 417 aa20.81■□□□□ 0.92
CPNE1-220ENST00000458038 NSG1P42857 185 aa20.81■□□□□ 0.92
CPNE1-220ENST00000458038 KCTD11Q693B1 232 aa20.81■□□□□ 0.92
CPNE1-220ENST00000458038 ARHGEF18Q6ZSZ5 1173 aa20.81■□□□□ 0.92
CPNE1-220ENST00000458038 CLDN19Q8N6F1 224 aa20.81■□□□□ 0.92
CPNE1-220ENST00000458038 TTC13Q8NBP0 860 aa20.81■□□□□ 0.92
CPNE1-220ENST00000458038 CDKN2AIPNLQ96HQ2 116 aa20.81■□□□□ 0.92
CPNE1-220ENST00000458038 AP1M1Q9BXS5 423 aa20.81■□□□□ 0.92
CPNE1-220ENST00000458038 MFRPQ9BY79 579 aa20.81■□□□□ 0.92
CPNE1-220ENST00000458038 XKR8Q9H6D3 395 aa20.81■□□□□ 0.92
CPNE1-220ENST00000458038 LRRC40Q9H9A6 602 aa20.81■□□□□ 0.92
CPNE1-220ENST00000458038 SRPK3Q9UPE1 567 aa20.81■□□□□ 0.92
CPNE1-220ENST00000458038 CACNA1DQ01668 2161 aa20.8■□□□□ 0.92
CPNE1-220ENST00000458038 NBPF19A0A087WUL8 3843 aa20.8■□□□□ 0.92
CPNE1-220ENST00000458038 IPO13O94829 963 aaKnown RBP20.8■□□□□ 0.92
CPNE1-220ENST00000458038 CDKN1CP49918 316 aaPredicted RBP20.8■□□□□ 0.92
CPNE1-220ENST00000458038 DCDP81605 110 aaKnown RBP20.8■□□□□ 0.92
CPNE1-220ENST00000458038 SPARCL1Q14515 664 aa20.8■□□□□ 0.92
CPNE1-220ENST00000458038 ITIH4Q14624 930 aa20.8■□□□□ 0.92
CPNE1-220ENST00000458038 FAM69BQ5VUD6 431 aa20.8■□□□□ 0.92
CPNE1-220ENST00000458038 TLDC1Q6P9B6 456 aa20.8■□□□□ 0.92
CPNE1-220ENST00000458038 IGFL3Q6UXB1 125 aa20.8■□□□□ 0.92
CPNE1-220ENST00000458038 MRGPREQ86SM8 312 aa20.8■□□□□ 0.92
CPNE1-220ENST00000458038 IQCKQ8N0W5 287 aa20.8■□□□□ 0.92
CPNE1-220ENST00000458038 NACC2Q96BF6 587 aa20.8■□□□□ 0.92
CPNE1-220ENST00000458038 OR2A14Q96R47 310 aa20.8■□□□□ 0.92
CPNE1-220ENST00000458038 MAP10Q9P2G4 905 aa20.8■□□□□ 0.92
CPNE1-220ENST00000458038 ICKQ9UPZ9 632 aa20.8■□□□□ 0.92
CPNE1-220ENST00000458038 ASF1AQ9Y294 204 aa20.8■□□□□ 0.92
CPNE1-220ENST00000458038 SNRNP200O75643 2136 aaKnown RBP20.8■□□□□ 0.92
CPNE1-220ENST00000458038 CRYBG3Q68DQ2 2970 aa20.79■□□□□ 0.92
CPNE1-220ENST00000458038 GOLGA6L9A6NEM1 432 aa20.79■□□□□ 0.92
CPNE1-220ENST00000458038 H3BMH7 237 aa20.79■□□□□ 0.92
CPNE1-220ENST00000458038 CCL22O00626 93 aa20.79■□□□□ 0.92
CPNE1-220ENST00000458038 SEMA7AO75326 666 aa20.79■□□□□ 0.92
CPNE1-220ENST00000458038 IPO7O95373 1038 aaKnown RBP20.79■□□□□ 0.92
CPNE1-220ENST00000458038 UGT2B7P16662 529 aa20.79■□□□□ 0.92
CPNE1-220ENST00000458038 PSMA3P25788 255 aa20.79■□□□□ 0.92
CPNE1-220ENST00000458038 ACADLP28330 430 aa20.79■□□□□ 0.92
CPNE1-220ENST00000458038 OTX2P32243 289 aa20.79■□□□□ 0.92
CPNE1-220ENST00000458038 FOLR3P41439 243 aa20.79■□□□□ 0.92
CPNE1-220ENST00000458038 MYBPC3Q14896 1274 aa20.79■□□□□ 0.92
CPNE1-220ENST00000458038 P3H1Q32P28 736 aa20.79■□□□□ 0.92
CPNE1-220ENST00000458038 MLIPQ5VWP3 458 aa20.79■□□□□ 0.92
CPNE1-220ENST00000458038 PACS1Q6VY07 963 aa20.79■□□□□ 0.92
CPNE1-220ENST00000458038 UNC5AQ6ZN44 842 aa20.79■□□□□ 0.92
CPNE1-220ENST00000458038 DENND1AQ8TEH3 1009 aa20.79■□□□□ 0.92
CPNE1-220ENST00000458038 TM9SF4Q92544 642 aa20.79■□□□□ 0.92
CPNE1-220ENST00000458038 PTERQ96BW5 349 aa20.79■□□□□ 0.92
CPNE1-220ENST00000458038 KLHL25Q9H0H3 589 aa20.79■□□□□ 0.92
CPNE1-220ENST00000458038 FAM60AQ9NP50 221 aa20.79■□□□□ 0.92
CPNE1-220ENST00000458038 SMARCAL1Q9NZC9 954 aa20.79■□□□□ 0.92
CPNE1-220ENST00000458038 NDOR1Q9UHB4 597 aa20.79■□□□□ 0.92
CPNE1-220ENST00000458038 B3GNT3Q9Y2A9 372 aa20.79■□□□□ 0.92
CPNE1-220ENST00000458038 POLEQ07864 2286 aa20.79■□□□□ 0.92
CPNE1-220ENST00000458038 A0A0J9YY10 115 aa20.78■□□□□ 0.92
CPNE1-220ENST00000458038 BTNL10A8MVZ5 291 aa20.78■□□□□ 0.92
CPNE1-220ENST00000458038 ZSCAN9O15535 394 aaPredicted RBP20.78■□□□□ 0.92
CPNE1-220ENST00000458038 CHRM5P08912 532 aaPredicted RBP20.78■□□□□ 0.92
CPNE1-220ENST00000458038 NAP1L1P55209 391 aaKnown RBP20.78■□□□□ 0.92
CPNE1-220ENST00000458038 SOX8P57073 446 aa20.78■□□□□ 0.92
CPNE1-220ENST00000458038 DBN1Q16643 649 aa20.78■□□□□ 0.92
CPNE1-220ENST00000458038 EIF2S3LQ2VIR3 472 aaKnown RBP20.78■□□□□ 0.92
CPNE1-220ENST00000458038 DCAF10Q5QP82 559 aa20.78■□□□□ 0.92
CPNE1-220ENST00000458038 LYPLAL1Q5VWZ2 237 aa20.78■□□□□ 0.92
CPNE1-220ENST00000458038 LINC00523Q86TU6 105 aa20.78■□□□□ 0.92
CPNE1-220ENST00000458038 PIANPQ8IYJ0 282 aa20.78■□□□□ 0.92
CPNE1-220ENST00000458038 GALNT16Q8N428 558 aa20.78■□□□□ 0.92
CPNE1-220ENST00000458038 OR5AR1Q8NGP9 310 aa20.78■□□□□ 0.92
CPNE1-220ENST00000458038 OR2Y1Q8NGV0 311 aa20.78■□□□□ 0.92
CPNE1-220ENST00000458038 OR5K2Q8NHB8 316 aa20.78■□□□□ 0.92
CPNE1-220ENST00000458038 GBP5Q96PP8 586 aa20.78■□□□□ 0.92
CPNE1-220ENST00000458038 TTC1Q99614 292 aa20.78■□□□□ 0.92
CPNE1-220ENST00000458038 CASS4Q9NQ75 786 aa20.78■□□□□ 0.92
CPNE1-220ENST00000458038 TXLNGQ9NUQ3 528 aa20.78■□□□□ 0.92
CPNE1-220ENST00000458038 IFT80Q9P2H3 777 aaPredicted RBP20.78■□□□□ 0.92
CPNE1-220ENST00000458038 TFR2Q9UP52 801 aa20.78■□□□□ 0.92
CPNE1-220ENST00000458038 PTRH2Q9Y3E5 179 aaKnown RBP20.78■□□□□ 0.92
CPNE1-220ENST00000458038 MDC1Q14676 2089 aaKnown RBP20.77■□□□□ 0.92
CPNE1-220ENST00000458038 CELSR2Q9HCU4 2923 aa20.77■□□□□ 0.92
CPNE1-220ENST00000458038 AP2A1O95782 977 aa20.77■□□□□ 0.92
CPNE1-220ENST00000458038 OR56A5P0C7T3 313 aa20.77■□□□□ 0.92
CPNE1-220ENST00000458038 CBSLP0DN79 551 aa20.77■□□□□ 0.92
CPNE1-220ENST00000458038 CBSP35520 551 aa20.77■□□□□ 0.92
CPNE1-220ENST00000458038 GABRA4P48169 554 aa20.77■□□□□ 0.92
CPNE1-220ENST00000458038 KIR2DS3Q14952 304 aa20.77■□□□□ 0.92
CPNE1-220ENST00000458038 KYNUQ16719 465 aa20.77■□□□□ 0.92
CPNE1-220ENST00000458038 SLC5A12Q1EHB4 618 aa20.77■□□□□ 0.92
CPNE1-220ENST00000458038 PLEKHN1Q494U1 663 aaPredicted RBP20.77■□□□□ 0.92
CPNE1-220ENST00000458038 RNF214Q8ND24 703 aa20.77■□□□□ 0.92
CPNE1-220ENST00000458038 PRR7Q8TB68 274 aa20.77■□□□□ 0.92
CPNE1-220ENST00000458038 ELMO1Q92556 727 aa20.77■□□□□ 0.92
CPNE1-220ENST00000458038 NRTNQ99748 197 aa20.77■□□□□ 0.92
CPNE1-220ENST00000458038 FAM118BQ9BPY3 351 aa20.77■□□□□ 0.92
CPNE1-220ENST00000458038 TRIM5Q9C035 493 aa20.77■□□□□ 0.92
CPNE1-220ENST00000458038 LUZP4Q9P127 313 aa20.77■□□□□ 0.92
CPNE1-220ENST00000458038 PLCL2Q9UPR0 1127 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms