RNA–Protein interactions for RNA: ENST00000457662.2

TRIM13-206, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-206ENST00000457662 TSPAN17Q96FV3 270 aa17.67■□□□□ 0.42
TRIM13-206ENST00000457662 GPR22Q99680 433 aa17.67■□□□□ 0.42
TRIM13-206ENST00000457662 SYTL2Q9HCH5 934 aa17.67■□□□□ 0.42
TRIM13-206ENST00000457662 TSR3Q9UJK0 312 aaKnown RBP17.67■□□□□ 0.42
TRIM13-206ENST00000457662 SLC39A10Q9ULF5 831 aa17.67■□□□□ 0.42
TRIM13-206ENST00000457662 GFYI3L273 518 aa17.66■□□□□ 0.42
TRIM13-206ENST00000457662 MATN2O00339 956 aa17.66■□□□□ 0.42
TRIM13-206ENST00000457662 ZBTB14O43829 449 aa17.66■□□□□ 0.42
TRIM13-206ENST00000457662 FAM155BO75949 473 aa17.66■□□□□ 0.42
TRIM13-206ENST00000457662 CATP04040 527 aaKnown RBP17.66■□□□□ 0.42
TRIM13-206ENST00000457662 USP10Q14694 798 aaKnown RBP17.66■□□□□ 0.42
TRIM13-206ENST00000457662 EFTUD2Q15029 972 aaKnown RBP eCLIP17.66■□□□□ 0.424e-14■■■■□ 22
TRIM13-206ENST00000457662 ERCC6LQ2NKX8 1250 aa17.66■□□□□ 0.42
TRIM13-206ENST00000457662 UBAP2Q5T6F2 1119 aaKnown RBP17.66■□□□□ 0.42
TRIM13-206ENST00000457662 WDR93Q6P2C0 686 aa17.66■□□□□ 0.42
TRIM13-206ENST00000457662 GSPT2Q8IYD1 628 aaKnown RBP17.66■□□□□ 0.42
TRIM13-206ENST00000457662 LIN37Q96GY3 246 aaPredicted RBP17.66■□□□□ 0.42
TRIM13-206ENST00000457662 PDLIM5Q96HC4 596 aaKnown RBP17.66■□□□□ 0.42
TRIM13-206ENST00000457662 POPDC3Q9HBV1 291 aa17.66■□□□□ 0.42
TRIM13-206ENST00000457662 OR6C2Q9NZP2 312 aa17.66■□□□□ 0.42
TRIM13-206ENST00000457662 AKAP7Q9P0M2 348 aaPredicted RBP17.66■□□□□ 0.42
TRIM13-206ENST00000457662 TMEM9Q9P0T7 183 aa17.66■□□□□ 0.42
TRIM13-206ENST00000457662 ICKQ9UPZ9 632 aa17.66■□□□□ 0.42
TRIM13-206ENST00000457662 RUVBL2Q9Y230 463 aaKnown RBP17.66■□□□□ 0.42
TRIM13-206ENST00000457662 MN1Q10571 1320 aaPredicted RBP17.66■□□□□ 0.42
TRIM13-206ENST00000457662 COL27A1Q8IZC6 1860 aaPredicted RBP17.65■□□□□ 0.42
TRIM13-206ENST00000457662 NCOR2Q9Y618 2525 aa17.65■□□□□ 0.42
TRIM13-206ENST00000457662 TOX3O15405 576 aaPredicted RBP17.65■□□□□ 0.42
TRIM13-206ENST00000457662 RIPK2O43353 540 aa17.65■□□□□ 0.42
TRIM13-206ENST00000457662 TPBGLP0DKB5 382 aa17.65■□□□□ 0.42
TRIM13-206ENST00000457662 THRAP10827 490 aa17.65■□□□□ 0.42
TRIM13-206ENST00000457662 MPSTP25325 297 aa17.65■□□□□ 0.42
TRIM13-206ENST00000457662 RAB28P51157 221 aa17.65■□□□□ 0.42
TRIM13-206ENST00000457662 EIF3IQ13347 325 aaKnown RBP17.65■□□□□ 0.42
TRIM13-206ENST00000457662 CAMK2BQ13554 666 aa17.65■□□□□ 0.42
TRIM13-206ENST00000457662 IRGCQ6NXR0 463 aa17.65■□□□□ 0.42
TRIM13-206ENST00000457662 MYO1HQ8N1T3 1032 aa17.65■□□□□ 0.42
TRIM13-206ENST00000457662 RAB42Q8N4Z0 105 aa17.65■□□□□ 0.42
TRIM13-206ENST00000457662 NKAPQ8N5F7 415 aaKnown RBP17.65■□□□□ 0.42
TRIM13-206ENST00000457662 FBXO15Q8NCQ5 510 aaPredicted RBP17.65■□□□□ 0.42
TRIM13-206ENST00000457662 MRRFQ96E11 262 aaKnown RBP17.65■□□□□ 0.42
TRIM13-206ENST00000457662 LINGO1Q96FE5 620 aa17.65■□□□□ 0.42
TRIM13-206ENST00000457662 CCDC74BQ96LY2 380 aa17.65■□□□□ 0.42
TRIM13-206ENST00000457662 TGM7Q96PF1 710 aa17.65■□□□□ 0.42
TRIM13-206ENST00000457662 CD180Q99467 661 aa17.65■□□□□ 0.42
TRIM13-206ENST00000457662 RAB11FIP5Q9BXF6 653 aa17.65■□□□□ 0.42
TRIM13-206ENST00000457662 NRSN2Q9GZP1 204 aa17.65■□□□□ 0.42
TRIM13-206ENST00000457662 XKR8Q9H6D3 395 aa17.65■□□□□ 0.42
TRIM13-206ENST00000457662 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.65■□□□□ 0.42
TRIM13-206ENST00000457662 IKBKGQ9Y6K9 419 aa17.65■□□□□ 0.42
TRIM13-206ENST00000457662 V9GYY5 206 aaPredicted RBP17.65■□□□□ 0.42
TRIM13-206ENST00000457662 SPEGQ15772 3267 aa17.65■□□□□ 0.42
TRIM13-206ENST00000457662 CCDC187A0A096LP49 1063 aa17.64■□□□□ 0.41
TRIM13-206ENST00000457662 HGSO14964 777 aaPredicted RBP17.64■□□□□ 0.41
TRIM13-206ENST00000457662 C8GP07360 202 aa17.64■□□□□ 0.41
TRIM13-206ENST00000457662 ITGA2BP08514 1039 aa17.64■□□□□ 0.41
TRIM13-206ENST00000457662 STMN1P16949 149 aa17.64■□□□□ 0.41
TRIM13-206ENST00000457662 POLR2CP19387 275 aaPredicted RBP17.64■□□□□ 0.41
TRIM13-206ENST00000457662 MAP4P27816 1152 aaKnown RBP17.64■□□□□ 0.41
TRIM13-206ENST00000457662 GFERP55789 205 aa17.64■□□□□ 0.41
TRIM13-206ENST00000457662 VSNL1P62760 191 aa17.64■□□□□ 0.41
TRIM13-206ENST00000457662 GRB7Q14451 532 aa17.64■□□□□ 0.41
TRIM13-206ENST00000457662 SNAP47Q5SQN1 464 aa17.64■□□□□ 0.41
TRIM13-206ENST00000457662 PIWIL4Q7Z3Z4 852 aaKnown RBP17.64■□□□□ 0.41
TRIM13-206ENST00000457662 ARHGAP22Q7Z5H3 698 aa17.64■□□□□ 0.41
TRIM13-206ENST00000457662 RASGRP3Q8IV61 690 aa17.64■□□□□ 0.41
TRIM13-206ENST00000457662 CEP97Q8IW35 865 aa17.64■□□□□ 0.41
TRIM13-206ENST00000457662 ADGRF3Q8IZF5 1079 aa17.64■□□□□ 0.41
TRIM13-206ENST00000457662 WDR36Q8NI36 951 aaKnown RBP17.64■□□□□ 0.41
TRIM13-206ENST00000457662 UHMK1Q8TAS1 419 aaKnown RBP17.64■□□□□ 0.41
TRIM13-206ENST00000457662 SLC44A1Q8WWI5 657 aa17.64■□□□□ 0.41
TRIM13-206ENST00000457662 CMKLR1Q99788 373 aa17.64■□□□□ 0.41
TRIM13-206ENST00000457662 GPAMQ9HCL2 828 aa17.64■□□□□ 0.41
TRIM13-206ENST00000457662 KLHL3Q9UH77 587 aa17.64■□□□□ 0.41
TRIM13-206ENST00000457662 LNPEPQ9UIQ6 1025 aa17.64■□□□□ 0.41
TRIM13-206ENST00000457662 TRABD2BA6NFA1 517 aa17.63■□□□□ 0.41
TRIM13-206ENST00000457662 A8MU76 341 aa17.63■□□□□ 0.41
TRIM13-206ENST00000457662 ARHGEF33A8MVX0 844 aa17.63■□□□□ 0.41
TRIM13-206ENST00000457662 C2orf74A8MZ97 194 aa17.63■□□□□ 0.41
TRIM13-206ENST00000457662 BTN3A3O00478 584 aa17.63■□□□□ 0.41
TRIM13-206ENST00000457662 RASGRF2O14827 1237 aa17.63■□□□□ 0.41
TRIM13-206ENST00000457662 SLC16A5O15375 505 aa17.63■□□□□ 0.41
TRIM13-206ENST00000457662 TSPAN12O95859 305 aa17.63■□□□□ 0.41
TRIM13-206ENST00000457662 TUBBP07437 444 aa17.63■□□□□ 0.41
TRIM13-206ENST00000457662 INHBAP08476 426 aa17.63■□□□□ 0.41
TRIM13-206ENST00000457662 ZNF37AP17032 561 aaPredicted RBP17.63■□□□□ 0.41
TRIM13-206ENST00000457662 MSH2P43246 934 aa17.63■□□□□ 0.41
TRIM13-206ENST00000457662 BDKRB1P46663 353 aa17.63■□□□□ 0.41
TRIM13-206ENST00000457662 PGGT1BP53609 377 aa17.63■□□□□ 0.41
TRIM13-206ENST00000457662 SLC29A2Q14542 456 aa17.63■□□□□ 0.41
TRIM13-206ENST00000457662 UAP1Q16222 522 aaPredicted RBP17.63■□□□□ 0.41
TRIM13-206ENST00000457662 TMEM207Q6UWW9 146 aa17.63■□□□□ 0.41
TRIM13-206ENST00000457662 UBE2R2Q712K3 238 aaPredicted RBP17.63■□□□□ 0.41
TRIM13-206ENST00000457662 RAB11FIP2Q7L804 512 aa17.63■□□□□ 0.41
TRIM13-206ENST00000457662 SPNS2Q8IVW8 549 aa17.63■□□□□ 0.41
TRIM13-206ENST00000457662 AGBL5Q8NDL9 886 aa17.63■□□□□ 0.41
TRIM13-206ENST00000457662 OR9A1PQ8NGU1 263 aa17.63■□□□□ 0.41
TRIM13-206ENST00000457662 MCOLN3Q8TDD5 553 aa17.63■□□□□ 0.41
TRIM13-206ENST00000457662 ANKRD7Q92527 254 aa17.63■□□□□ 0.41
TRIM13-206ENST00000457662 MENTQ9BUN1 341 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms