RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 GALNT7Q86SF2 657 aa12.17□□□□□ -0.46
LINC00959-201ENST00000456581 IGFN1Q86VF2 1251 aa12.17□□□□□ -0.46
LINC00959-201ENST00000456581 PHACTR4Q8IZ21 702 aa12.17□□□□□ -0.46
LINC00959-201ENST00000456581 NSMCE2Q96MF7 247 aa12.17□□□□□ -0.46
LINC00959-201ENST00000456581 BOCQ9BWV1 1114 aa12.17□□□□□ -0.46
LINC00959-201ENST00000456581 ADGRE3Q9BY15 652 aa12.17□□□□□ -0.46
LINC00959-201ENST00000456581 INTS10Q9NVR2 710 aaKnown RBP12.17□□□□□ -0.46
LINC00959-201ENST00000456581 TUBA8Q9NY65 449 aaPredicted RBP12.17□□□□□ -0.46
LINC00959-201ENST00000456581 PKD2L2Q9NZM6 624 aa12.17□□□□□ -0.46
LINC00959-201ENST00000456581 WARS2Q9UGM6 360 aaKnown RBP12.17□□□□□ -0.46
LINC00959-201ENST00000456581 CDH7Q9ULB5 785 aa12.17□□□□□ -0.46
LINC00959-201ENST00000456581 NEUROG3Q9Y4Z2 214 aa12.17□□□□□ -0.46
LINC00959-201ENST00000456581 LEFTY2O00292 366 aa12.17□□□□□ -0.46
LINC00959-201ENST00000456581 ZNF821O75541 412 aaPredicted RBP12.17□□□□□ -0.46
LINC00959-201ENST00000456581 INMTO95050 263 aa12.17□□□□□ -0.46
LINC00959-201ENST00000456581 CAPN1P07384 714 aa12.17□□□□□ -0.46
LINC00959-201ENST00000456581 OGNP20774 298 aaKnown RBP12.17□□□□□ -0.46
LINC00959-201ENST00000456581 GDF5P43026 501 aa12.17□□□□□ -0.46
LINC00959-201ENST00000456581 SGO1Q5FBB7 561 aa12.17□□□□□ -0.46
LINC00959-201ENST00000456581 XKR7Q5GH72 579 aa12.17□□□□□ -0.46
LINC00959-201ENST00000456581 ASTLQ6HA08 431 aaPredicted RBP12.17□□□□□ -0.46
LINC00959-201ENST00000456581 AFTPHQ6ULP2 937 aa12.17□□□□□ -0.46
LINC00959-201ENST00000456581 MILR1Q7Z6M3 343 aa12.17□□□□□ -0.46
LINC00959-201ENST00000456581 TMEM179BQ7Z7N9 219 aa12.17□□□□□ -0.46
LINC00959-201ENST00000456581 FRS2Q8WU20 508 aa12.17□□□□□ -0.46
LINC00959-201ENST00000456581 PIH1D2Q8WWB5 315 aa12.17□□□□□ -0.46
LINC00959-201ENST00000456581 SDCCAG3Q96C92 435 aa12.17□□□□□ -0.46
LINC00959-201ENST00000456581 AURKBQ96GD4 344 aaPredicted RBP12.17□□□□□ -0.46
LINC00959-201ENST00000456581 COX4I2Q96KJ9 171 aa12.17□□□□□ -0.46
LINC00959-201ENST00000456581 GPR63Q9BZJ6 419 aa12.17□□□□□ -0.46
LINC00959-201ENST00000456581 AMBRA1Q9C0C7 1298 aa12.17□□□□□ -0.46
LINC00959-201ENST00000456581 TFB2MQ9H5Q4 396 aaKnown RBP12.17□□□□□ -0.46
LINC00959-201ENST00000456581 SLC6A13Q9NSD5 602 aa12.17□□□□□ -0.46
LINC00959-201ENST00000456581 ABCB8Q9NUT2 735 aa12.17□□□□□ -0.46
LINC00959-201ENST00000456581 TBC1D23Q9NUY8 699 aa12.17□□□□□ -0.46
LINC00959-201ENST00000456581 PAK1IP1Q9NWT1 392 aaPredicted RBP12.17□□□□□ -0.46
LINC00959-201ENST00000456581 DNMT3BQ9UBC3 853 aaKnown RBP12.17□□□□□ -0.46
LINC00959-201ENST00000456581 ARIH1Q9Y4X5 557 aaPredicted RBP12.17□□□□□ -0.46
LINC00959-201ENST00000456581 TYW5A2RUC4 315 aaKnown RBP12.16□□□□□ -0.46
LINC00959-201ENST00000456581 E2F3O00716 465 aa12.16□□□□□ -0.46
LINC00959-201ENST00000456581 CLDN7O95471 211 aa12.16□□□□□ -0.46
LINC00959-201ENST00000456581 ESRRBO95718 433 aa12.16□□□□□ -0.46
LINC00959-201ENST00000456581 PRR35P0CG20 571 aa12.16□□□□□ -0.46
LINC00959-201ENST00000456581 PPP3CCP48454 512 aa12.16□□□□□ -0.46
LINC00959-201ENST00000456581 HLCSP50747 726 aa12.16□□□□□ -0.46
LINC00959-201ENST00000456581 PLA2G16P53816 162 aa12.16□□□□□ -0.46
LINC00959-201ENST00000456581 ABRAXAS2Q15018 415 aa12.16□□□□□ -0.46
LINC00959-201ENST00000456581 CCNYL2Q5T2Q4 361 aa12.16□□□□□ -0.46
LINC00959-201ENST00000456581 TSPAN33Q86UF1 283 aa12.16□□□□□ -0.46
LINC00959-201ENST00000456581 PTRH1Q86Y79 214 aaKnown RBP12.16□□□□□ -0.46
LINC00959-201ENST00000456581 TMEM25Q86YD3 366 aa12.16□□□□□ -0.46
LINC00959-201ENST00000456581 RIMKLAQ8IXN7 391 aa12.16□□□□□ -0.46
LINC00959-201ENST00000456581 CLDN19Q8N6F1 224 aa12.16□□□□□ -0.46
LINC00959-201ENST00000456581 OR13F1Q8NGS4 319 aa12.16□□□□□ -0.46
LINC00959-201ENST00000456581 OR10A6Q8NH74 314 aa12.16□□□□□ -0.46
LINC00959-201ENST00000456581 LINC00597Q9H2U6 94 aa12.16□□□□□ -0.46
LINC00959-201ENST00000456581 ZFP14Q9HCL3 533 aa12.16□□□□□ -0.46
LINC00959-201ENST00000456581 TAS2R13Q9NYV9 303 aa12.16□□□□□ -0.46
LINC00959-201ENST00000456581 SUN2Q9UH99 717 aa12.16□□□□□ -0.46
LINC00959-201ENST00000456581 GBF1Q92538 1859 aa12.16□□□□□ -0.46
LINC00959-201ENST00000456581 TMEM221A6NGB7 291 aa12.16□□□□□ -0.46
LINC00959-201ENST00000456581 XPNPEP2O43895 674 aa12.16□□□□□ -0.46
LINC00959-201ENST00000456581 FZD6O60353 706 aa12.16□□□□□ -0.46
LINC00959-201ENST00000456581 ARHGEF15O94989 841 aa12.16□□□□□ -0.46
LINC00959-201ENST00000456581 PRSS23O95084 383 aa12.16□□□□□ -0.46
LINC00959-201ENST00000456581 CCNA2P20248 432 aa12.16□□□□□ -0.46
LINC00959-201ENST00000456581 HLA-FP30511 346 aa12.16□□□□□ -0.46
LINC00959-201ENST00000456581 SUOXP51687 545 aa12.16□□□□□ -0.46
LINC00959-201ENST00000456581 HMGCS1Q01581 520 aa12.16□□□□□ -0.46
LINC00959-201ENST00000456581 RAD51Q06609 339 aa12.16□□□□□ -0.46
LINC00959-201ENST00000456581 DNASE1L3Q13609 305 aa12.16□□□□□ -0.46
LINC00959-201ENST00000456581 CBX2Q14781 532 aaPredicted RBP12.16□□□□□ -0.46
LINC00959-201ENST00000456581 ZNF829Q3KNS6 432 aaPredicted RBP12.16□□□□□ -0.46
LINC00959-201ENST00000456581 INO80DQ53TQ3 878 aaPredicted RBP12.16□□□□□ -0.46
LINC00959-201ENST00000456581 RFLNAQ6ZTI6 216 aa12.16□□□□□ -0.46
LINC00959-201ENST00000456581 TBC1D21Q8IYX1 336 aa12.16□□□□□ -0.46
LINC00959-201ENST00000456581 KRTCAP2Q8N6L1 136 aa12.16□□□□□ -0.46
LINC00959-201ENST00000456581 DCAF4L2Q8NA75 395 aa12.16□□□□□ -0.46
LINC00959-201ENST00000456581 PDPRQ8NCN5 879 aa12.16□□□□□ -0.46
LINC00959-201ENST00000456581 RHEBL1Q8TAI7 183 aa12.16□□□□□ -0.46
LINC00959-201ENST00000456581 ITFG1Q8TB96 612 aa12.16□□□□□ -0.46
LINC00959-201ENST00000456581 BPIFB1Q8TDL5 484 aa12.16□□□□□ -0.46
LINC00959-201ENST00000456581 BADQ92934 168 aa12.16□□□□□ -0.46
LINC00959-201ENST00000456581 PEX13Q92968 403 aa12.16□□□□□ -0.46
LINC00959-201ENST00000456581 DOK1Q99704 481 aa12.16□□□□□ -0.46
LINC00959-201ENST00000456581 MYOCQ99972 504 aa12.16□□□□□ -0.46
LINC00959-201ENST00000456581 C17orf80Q9BSJ5 609 aa12.16□□□□□ -0.46
LINC00959-201ENST00000456581 IL17CQ9P0M4 197 aa12.16□□□□□ -0.46
LINC00959-201ENST00000456581 LEF1Q9UJU2 399 aaPredicted RBP12.16□□□□□ -0.46
LINC00959-201ENST00000456581 PTBP2Q9UKA9 531 aaKnown RBP12.16□□□□□ -0.46
LINC00959-201ENST00000456581 ALPLP05186 524 aa12.15□□□□□ -0.46
LINC00959-201ENST00000456581 IRS1P35568 1242 aa12.15□□□□□ -0.46
LINC00959-201ENST00000456581 PPM1AP35813 382 aa12.15□□□□□ -0.46
LINC00959-201ENST00000456581 MAGEA8P43361 318 aa12.15□□□□□ -0.46
LINC00959-201ENST00000456581 BCAP31P51572 246 aa12.15□□□□□ -0.46
LINC00959-201ENST00000456581 NR6A1Q15406 480 aa12.15□□□□□ -0.46
LINC00959-201ENST00000456581 PLEKHG6Q3KR16 790 aa12.15□□□□□ -0.46
LINC00959-201ENST00000456581 ATP6AP1LQ52LC2 224 aa12.15□□□□□ -0.46
LINC00959-201ENST00000456581 GPRIN3Q6ZVF9 776 aa12.15□□□□□ -0.46
LINC00959-201ENST00000456581 GALNT10Q86SR1 603 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms